RNA–Protein interactions for RNA: ENST00000568917.1

CNOT1-214, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-214ENST00000568917 P01737 135 aa7.11□□□□□ -1.27
CNOT1-214ENST00000568917 SRSF2Q01130 221 aaKnown RBP7.11□□□□□ -1.27
CNOT1-214ENST00000568917 C9orf47Q6ZRZ4 202 aa7.11□□□□□ -1.27
CNOT1-214ENST00000568917 GBGT1Q8N5D6 347 aa7.11□□□□□ -1.27
CNOT1-214ENST00000568917 NUDT10Q8NFP7 164 aa7.11□□□□□ -1.27
CNOT1-214ENST00000568917 TSKUQ8WUA8 353 aa7.11□□□□□ -1.27
CNOT1-214ENST00000568917 NUDT11Q96G61 164 aa7.11□□□□□ -1.27
CNOT1-214ENST00000568917 C16orf92Q96LL3 132 aa7.11□□□□□ -1.27
CNOT1-214ENST00000568917 RPP21Q9H633 154 aaKnown RBP7.11□□□□□ -1.27
CNOT1-214ENST00000568917 BAHCC1Q9P281 2608 aa7.1□□□□□ -1.27
CNOT1-214ENST00000568917 MYO9AB2RTY4 2548 aa7.1□□□□□ -1.27
CNOT1-214ENST00000568917 TLN2Q9Y4G6 2542 aa7.1□□□□□ -1.27
CNOT1-214ENST00000568917 AKAP9Q99996 3911 aa7.1□□□□□ -1.27
CNOT1-214ENST00000568917 IGHV3-49A0A0A0MS15 119 aa7.1□□□□□ -1.27
CNOT1-214ENST00000568917 TRAV8-1A0A0A6YYK1 113 aa7.1□□□□□ -1.27
CNOT1-214ENST00000568917 TRAV2A0A0B4J234 112 aa7.1□□□□□ -1.27
CNOT1-214ENST00000568917 A0A1B0GUS0 222 aa7.1□□□□□ -1.27
CNOT1-214ENST00000568917 OVOL1O14753 267 aa7.1□□□□□ -1.27
CNOT1-214ENST00000568917 ID1P41134 155 aa7.1□□□□□ -1.27
CNOT1-214ENST00000568917 TCTEX1D4Q5JR98 221 aa7.1□□□□□ -1.27
CNOT1-214ENST00000568917 Q6AWC8 147 aa7.1□□□□□ -1.27
CNOT1-214ENST00000568917 NHLRC2Q8NBF2 726 aa7.1□□□□□ -1.27
CNOT1-214ENST00000568917 LINC01006Q8NI28 216 aa7.1□□□□□ -1.27
CNOT1-214ENST00000568917 DPF1Q92782 380 aa7.1□□□□□ -1.27
CNOT1-214ENST00000568917 PRR25Q96S07 402 aa7.1□□□□□ -1.27
CNOT1-214ENST00000568917 NAT8BQ9UHF3 227 aa7.1□□□□□ -1.27
CNOT1-214ENST00000568917 TSSC4Q9Y5U2 329 aaPredicted RBP7.1□□□□□ -1.27
CNOT1-214ENST00000568917 HECTD1Q9ULT8 2610 aa7.09□□□□□ -1.27
CNOT1-214ENST00000568917 HIVEP2P31629 2446 aa7.09□□□□□ -1.27
CNOT1-214ENST00000568917 IGHV3OR16-13A0A075B7E8 117 aa7.09□□□□□ -1.27
CNOT1-214ENST00000568917 IGHV3-74A0A0B4J1X5 117 aa7.09□□□□□ -1.27
CNOT1-214ENST00000568917 XKRY2A2RUG3 117 aa7.09□□□□□ -1.27
CNOT1-214ENST00000568917 IZUMO1RA6ND01 250 aa7.09□□□□□ -1.27
CNOT1-214ENST00000568917 C2orf70A6NJV1 201 aa7.09□□□□□ -1.27
CNOT1-214ENST00000568917 TCF21O43680 179 aa7.09□□□□□ -1.27
CNOT1-214ENST00000568917 MT-ND6P03923 174 aa7.09□□□□□ -1.27
CNOT1-214ENST00000568917 CBLN1P23435 193 aa7.09□□□□□ -1.27
CNOT1-214ENST00000568917 FOXA3P55318 350 aaPredicted RBP7.09□□□□□ -1.27
CNOT1-214ENST00000568917 SYNJ2BPP57105 145 aa7.09□□□□□ -1.27
CNOT1-214ENST00000568917 TMEM78Q5T7P6 136 aa7.09□□□□□ -1.27
CNOT1-214ENST00000568917 TCF24Q7RTU0 167 aa7.09□□□□□ -1.27
CNOT1-214ENST00000568917 ATP5L2Q7Z4Y8 100 aa7.09□□□□□ -1.27
CNOT1-214ENST00000568917 OR11H1Q8NG94 326 aa7.09□□□□□ -1.27
CNOT1-214ENST00000568917 OR1N2Q8NGR9 330 aa7.09□□□□□ -1.27
CNOT1-214ENST00000568917 ZC2HC1AQ96GY0 325 aa7.09□□□□□ -1.27
CNOT1-214ENST00000568917 LINC00477Q96M19 166 aa7.09□□□□□ -1.27
CNOT1-214ENST00000568917 SMR3AQ99954 134 aa7.09□□□□□ -1.27
CNOT1-214ENST00000568917 IGKV2-40A0A087WW87 121 aaPredicted RBP7.08□□□□□ -1.28
CNOT1-214ENST00000568917 IGKV2D-40P01614 121 aaPredicted RBP7.08□□□□□ -1.28
CNOT1-214ENST00000568917 RPS20P60866 119 aaKnown RBP7.08□□□□□ -1.28
CNOT1-214ENST00000568917 PAFAH1B2P68402 229 aa7.08□□□□□ -1.28
CNOT1-214ENST00000568917 FHL3Q13643 280 aa7.08□□□□□ -1.28
CNOT1-214ENST00000568917 SMUG1Q53HV7 270 aa7.08□□□□□ -1.28
CNOT1-214ENST00000568917 FAM162BQ5T6X4 162 aa7.08□□□□□ -1.28
CNOT1-214ENST00000568917 PRR27Q6MZM9 219 aa7.08□□□□□ -1.28
CNOT1-214ENST00000568917 WDR73Q6P4I2 378 aa7.08□□□□□ -1.28
CNOT1-214ENST00000568917 KLHL30-AS1Q8NEE0 82 aa7.08□□□□□ -1.28
CNOT1-214ENST00000568917 OR9G4Q8NGQ1 327 aa7.08□□□□□ -1.28
CNOT1-214ENST00000568917 DCANP1Q8TF63 244 aa7.08□□□□□ -1.28
CNOT1-214ENST00000568917 SGK494Q96LW2 274 aa7.08□□□□□ -1.28
CNOT1-214ENST00000568917 ASCL2Q99929 193 aa7.08□□□□□ -1.28
CNOT1-214ENST00000568917 GNB1LQ9BYB4 327 aa7.08□□□□□ -1.28
CNOT1-214ENST00000568917 SIGLEC8Q9NYZ4 499 aa7.08□□□□□ -1.28
CNOT1-214ENST00000568917 SONP18583 2426 aaKnown RBP7.08□□□□□ -1.28
CNOT1-214ENST00000568917 ACANP16112 2415 aa7.07□□□□□ -1.28
CNOT1-214ENST00000568917 LOC105371267A0A1B0GV96 52 aa7.07□□□□□ -1.28
CNOT1-214ENST00000568917 PHOX2AO14813 284 aa7.07□□□□□ -1.28
CNOT1-214ENST00000568917 CRLF1O75462 422 aa7.07□□□□□ -1.28
CNOT1-214ENST00000568917 TRGC2P03986 189 aa7.07□□□□□ -1.28
CNOT1-214ENST00000568917 HLA-DMBP28068 263 aa7.07□□□□□ -1.28
CNOT1-214ENST00000568917 ZNF138P52744 262 aa7.07□□□□□ -1.28
CNOT1-214ENST00000568917 PROK1P58294 105 aa7.07□□□□□ -1.28
CNOT1-214ENST00000568917 SNRPD3P62318 126 aaKnown RBP7.07□□□□□ -1.28
CNOT1-214ENST00000568917 RPL11P62913 178 aaKnown RBP7.07□□□□□ -1.28
CNOT1-214ENST00000568917 ACTL10Q5JWF8 245 aa7.07□□□□□ -1.28
CNOT1-214ENST00000568917 LINC00322Q6ZN03 302 aaPredicted RBP7.07□□□□□ -1.28
CNOT1-214ENST00000568917 RNF182Q8N6D2 247 aa7.07□□□□□ -1.28
CNOT1-214ENST00000568917 ZNF738Q8NE65 137 aa7.07□□□□□ -1.28
CNOT1-214ENST00000568917 OR10J6PQ8NGY7 276 aa7.07□□□□□ -1.28
CNOT1-214ENST00000568917 VGLL1Q99990 258 aa7.07□□□□□ -1.28
CNOT1-214ENST00000568917 ANK3Q12955 4377 aaKnown RBP7.07□□□□□ -1.28
CNOT1-214ENST00000568917 A0A1B0GW15 77 aa7.06□□□□□ -1.28
CNOT1-214ENST00000568917 FABP5P3A8MUU1 101 aa7.06□□□□□ -1.28
CNOT1-214ENST00000568917 HIGD1CA8MV81 97 aa7.06□□□□□ -1.28
CNOT1-214ENST00000568917 ZNF705FA8MVS1 300 aaPredicted RBP7.06□□□□□ -1.28
CNOT1-214ENST00000568917 INAFM1C9JVW0 142 aa7.06□□□□□ -1.28
CNOT1-214ENST00000568917 K7EQG2 157 aa7.06□□□□□ -1.28
CNOT1-214ENST00000568917 S100A6P06703 90 aa7.06□□□□□ -1.28
CNOT1-214ENST00000568917 HIST1H1AQ02539 215 aaPredicted RBP7.06□□□□□ -1.28
CNOT1-214ENST00000568917 KHDC1LQ5JSQ8 128 aa7.06□□□□□ -1.28
CNOT1-214ENST00000568917 IGFL4Q6B9Z1 124 aa7.06□□□□□ -1.28
CNOT1-214ENST00000568917 RBPMS2Q6ZRY4 209 aaKnown RBP7.06□□□□□ -1.28
CNOT1-214ENST00000568917 OR2D3Q8NGH3 330 aa7.06□□□□□ -1.28
CNOT1-214ENST00000568917 ODF3Q96PU9 254 aa7.06□□□□□ -1.28
CNOT1-214ENST00000568917 NEU1Q99519 415 aa7.06□□□□□ -1.28
CNOT1-214ENST00000568917 AGPAT4-IT1Q9H0P7 198 aa7.06□□□□□ -1.28
CNOT1-214ENST00000568917 TRAPPC1Q9Y5R8 145 aa7.06□□□□□ -1.28
CNOT1-214ENST00000568917 TRAV25A0A0B4J276 109 aa7.05□□□□□ -1.28
CNOT1-214ENST00000568917 PRAC2D3DTV9 90 aa7.05□□□□□ -1.28
CNOT1-214ENST00000568917 HLA-DQA1P01909 254 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms