RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 SLC51BQ86UW2 128 aa18.91■□□□□ 0.62
NME3-209ENST00000566600 TMED6Q8WW62 240 aa18.91■□□□□ 0.62
NME3-209ENST00000566600 MAP1LC3BQ9GZQ8 125 aa18.91■□□□□ 0.62
NME3-209ENST00000566600 AGPAT4-IT1Q9H0P7 198 aa18.91■□□□□ 0.62
NME3-209ENST00000566600 TRAV12-2A0A075B6T6 113 aa18.9■□□□□ 0.62
NME3-209ENST00000566600 TMEM256Q8N2U0 113 aa18.9■□□□□ 0.62
NME3-209ENST00000566600 C9orf62Q8N4C0 152 aa18.9■□□□□ 0.62
NME3-209ENST00000566600 C20orf144Q9BQM9 153 aa18.9■□□□□ 0.62
NME3-209ENST00000566600 DIRC3C9JPN6 131 aa18.89■□□□□ 0.61
NME3-209ENST00000566600 FAM213BQ8TBF2 198 aa18.89■□□□□ 0.61
NME3-209ENST00000566600 A0A1W2PRE2 83 aa18.88■□□□□ 0.61
NME3-209ENST00000566600 HBE1P02100 147 aa18.88■□□□□ 0.61
NME3-209ENST00000566600 VGLL1Q99990 258 aa18.88■□□□□ 0.61
NME3-209ENST00000566600 PLA2G2EQ9NZK7 142 aa18.88■□□□□ 0.61
NME3-209ENST00000566600 TMEM189A5PLL7 270 aa18.87■□□□□ 0.61
NME3-209ENST00000566600 DEFB4AO15263 64 aa18.87■□□□□ 0.61
NME3-209ENST00000566600 NMBP08949 121 aa18.87■□□□□ 0.61
NME3-209ENST00000566600 RBMY1A1P0DJD3 496 aaKnown RBP18.87■□□□□ 0.61
NME3-209ENST00000566600 RBMY1CP0DJD4 496 aa18.87■□□□□ 0.61
NME3-209ENST00000566600 FHITP49789 147 aa18.87■□□□□ 0.61
NME3-209ENST00000566600 ZNF138P52744 262 aa18.87■□□□□ 0.61
NME3-209ENST00000566600 FGF8P55075 233 aaPredicted RBP18.87■□□□□ 0.61
NME3-209ENST00000566600 RBMY1FQ15415 496 aaKnown RBP18.87■□□□□ 0.61
NME3-209ENST00000566600 C5orf17Q8NAS9 161 aa18.87■□□□□ 0.61
NME3-209ENST00000566600 ZNF492Q9P255 531 aa18.87■□□□□ 0.61
NME3-209ENST00000566600 TRBV7-9A0A0J9YWB2 115 aa18.86■□□□□ 0.61
NME3-209ENST00000566600 RAB5CP51148 216 aa18.86■□□□□ 0.61
NME3-209ENST00000566600 RRN3P1Q2M238 152 aa18.86■□□□□ 0.61
NME3-209ENST00000566600 MBD3L1Q8WWY6 194 aa18.86■□□□□ 0.61
NME3-209ENST00000566600 FAM19A4Q96LR4 140 aa18.86■□□□□ 0.61
NME3-209ENST00000566600 NKX6-2Q9C056 277 aaPredicted RBP18.86■□□□□ 0.61
NME3-209ENST00000566600 SERTM2A0A1B0GWG4 89 aa18.85■□□□□ 0.61
NME3-209ENST00000566600 GFI1BQ5VTD9 330 aa18.85■□□□□ 0.61
NME3-209ENST00000566600 SFT2D1Q8WV19 159 aa18.85■□□□□ 0.61
NME3-209ENST00000566600 LINC01587Q99440 93 aa18.85■□□□□ 0.61
NME3-209ENST00000566600 TMPRSS5Q9H3S3 457 aa18.85■□□□□ 0.61
NME3-209ENST00000566600 RPH3ALQ9UNE2 315 aa18.85■□□□□ 0.61
NME3-209ENST00000566600 CRISP2P16562 243 aa18.84■□□□□ 0.61
NME3-209ENST00000566600 SUMO1P63165 101 aaKnown RBP18.84■□□□□ 0.61
NME3-209ENST00000566600 C11orf45Q8TAV5 145 aa18.84■□□□□ 0.61
NME3-209ENST00000566600 LENEPQ9Y5L5 61 aa18.84■□□□□ 0.61
NME3-209ENST00000566600 DNAH7Q8WXX0 4024 aa18.84■□□□□ 0.61
NME3-209ENST00000566600 H7BYZ3 331 aa18.83■□□□□ 0.6
NME3-209ENST00000566600 K7EQM0 130 aa18.83■□□□□ 0.6
NME3-209ENST00000566600 H2AFB1P0C5Y9 115 aa18.83■□□□□ 0.6
NME3-209ENST00000566600 GOLT1AQ6ZVE7 132 aa18.83■□□□□ 0.6
NME3-209ENST00000566600 KLLNB2CW77 178 aa18.82■□□□□ 0.6
NME3-209ENST00000566600 GGTLC3B5MD39 225 aa18.82■□□□□ 0.6
NME3-209ENST00000566600 J3KRW8 73 aa18.82■□□□□ 0.6
NME3-209ENST00000566600 GPX1P07203 203 aa18.82■□□□□ 0.6
NME3-209ENST00000566600 TAS2R60P59551 318 aa18.82■□□□□ 0.6
NME3-209ENST00000566600 KIR3DS1Q14943 382 aa18.82■□□□□ 0.6
NME3-209ENST00000566600 NIPSNAP3BQ9BS92 247 aa18.82■□□□□ 0.6
NME3-209ENST00000566600 LOC102723971A0A1B0GUV8 181 aa18.81■□□□□ 0.6
NME3-209ENST00000566600 C7orf71A4D174 169 aa18.81■□□□□ 0.6
NME3-209ENST00000566600 GNG5P63218 68 aa18.81■□□□□ 0.6
NME3-209ENST00000566600 EPDR1Q9UM22 224 aa18.81■□□□□ 0.6
NME3-209ENST00000566600 TRAV12-3A0A0B4J271 114 aa18.8■□□□□ 0.6
NME3-209ENST00000566600 TCRAP04437 139 aa18.8■□□□□ 0.6
NME3-209ENST00000566600 UBE2G2P60604 165 aa18.8■□□□□ 0.6
NME3-209ENST00000566600 CASC10Q5T4H9 136 aa18.8■□□□□ 0.6
NME3-209ENST00000566600 Q8TAT8 98 aa18.8■□□□□ 0.6
NME3-209ENST00000566600 YTHDF2Q9Y5A9 579 aaKnown RBP18.8■□□□□ 0.6
NME3-209ENST00000566600 ARL2-SNX15V9GYD0 113 aa18.8■□□□□ 0.6
NME3-209ENST00000566600 FAM74A7A6NL05 159 aa18.79■□□□□ 0.6
NME3-209ENST00000566600 ZNF705GA8MUZ8 300 aaPredicted RBP18.79■□□□□ 0.6
NME3-209ENST00000566600 RNASE4P34096 147 aaKnown RBP18.79■□□□□ 0.6
NME3-209ENST00000566600 SULT1A2P50226 295 aa18.79■□□□□ 0.6
NME3-209ENST00000566600 ZFAND6Q6FIF0 208 aa18.79■□□□□ 0.6
NME3-209ENST00000566600 ZFAND2AQ8N6M9 145 aa18.79■□□□□ 0.6
NME3-209ENST00000566600 TEX48A0A1B0GUV7 120 aa18.78■□□□□ 0.6
NME3-209ENST00000566600 CXorf65A6NEN9 183 aa18.78■□□□□ 0.6
NME3-209ENST00000566600 FBLL1A6NHQ2 334 aaKnown RBP18.78■□□□□ 0.6
NME3-209ENST00000566600 TEX46H3BTG2 121 aa18.78■□□□□ 0.6
NME3-209ENST00000566600 IFNA7P01567 189 aa18.78■□□□□ 0.6
NME3-209ENST00000566600 PPT1P50897 306 aa18.78■□□□□ 0.6
NME3-209ENST00000566600 CYB561D1Q8N8Q1 229 aa18.78■□□□□ 0.6
NME3-209ENST00000566600 ATG101Q9BSB4 218 aa18.78■□□□□ 0.6
NME3-209ENST00000566600 EMP1P54849 157 aa18.77■□□□□ 0.6
NME3-209ENST00000566600 ZNF493Q6ZR52 646 aa18.77■□□□□ 0.6
NME3-209ENST00000566600 PYGO2Q9BRQ0 406 aa18.77■□□□□ 0.6
NME3-209ENST00000566600 SPART-AS1P0CW21 52 aa18.76■□□□□ 0.59
NME3-209ENST00000566600 HTN1P15515 57 aa18.76■□□□□ 0.59
NME3-209ENST00000566600 NKX2-5P52952 324 aaPredicted RBP18.76■□□□□ 0.59
NME3-209ENST00000566600 NANOS2P60321 138 aaKnown RBP18.76■□□□□ 0.59
NME3-209ENST00000566600 BTN1A1Q13410 526 aa18.76■□□□□ 0.59
NME3-209ENST00000566600 CCDC28AQ8IWP9 274 aa18.76■□□□□ 0.59
NME3-209ENST00000566600 TCEAL7Q9BRU2 100 aa18.76■□□□□ 0.59
NME3-209ENST00000566600 TRAV1-1A0A0B4J248 108 aa18.75■□□□□ 0.59
NME3-209ENST00000566600 PMS2P11Q13670 270 aa18.75■□□□□ 0.59
NME3-209ENST00000566600 CST9LP1Q5W188 147 aa18.75■□□□□ 0.59
NME3-209ENST00000566600 HIST1H2BAQ96A08 127 aa18.75■□□□□ 0.59
NME3-209ENST00000566600 C16orf74Q96GX8 76 aa18.75■□□□□ 0.59
NME3-209ENST00000566600 NDFIP1Q9BT67 221 aa18.75■□□□□ 0.59
NME3-209ENST00000566600 TRAV8-1A0A0A6YYK1 113 aa18.74■□□□□ 0.59
NME3-209ENST00000566600 A0A1B0GV50 99 aa18.74■□□□□ 0.59
NME3-209ENST00000566600 ZNF324O75467 553 aaPredicted RBP18.74■□□□□ 0.59
NME3-209ENST00000566600 TMEM75Q8N9X5 138 aa18.74■□□□□ 0.59
NME3-209ENST00000566600 NUPR2A6NF83 97 aa18.73■□□□□ 0.59
NME3-209ENST00000566600 F6UZH7 168 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms