RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 PRM2P04554 102 aa8.87□□□□□ -0.99
RNF40-208ENST00000565995 SEC11BP0C7V7 166 aa8.87□□□□□ -0.99
RNF40-208ENST00000565995 RAB2AP61019 212 aa8.87□□□□□ -0.99
RNF40-208ENST00000565995 SERF2P84101 59 aa8.87□□□□□ -0.99
RNF40-208ENST00000565995 C10orf113Q5VZT2 155 aa8.87□□□□□ -0.99
RNF40-208ENST00000565995 PFDN5Q99471 154 aa8.87□□□□□ -0.99
RNF40-208ENST00000565995 UPK3BQ9BT76 320 aa8.87□□□□□ -0.99
RNF40-208ENST00000565995 TMEM208Q9BTX3 173 aa8.87□□□□□ -0.99
RNF40-208ENST00000565995 KRTAP1-5Q9BYS1 174 aa8.87□□□□□ -0.99
RNF40-208ENST00000565995 HIGD1AQ9Y241 93 aa8.87□□□□□ -0.99
RNF40-208ENST00000565995 MYCBP2O75592 4640 aa8.87□□□□□ -0.99
RNF40-208ENST00000565995 ZNF705GA8MUZ8 300 aaPredicted RBP8.86□□□□□ -0.99
RNF40-208ENST00000565995 F5H768 121 aa8.86□□□□□ -0.99
RNF40-208ENST00000565995 MBP02144 154 aa8.86□□□□□ -0.99
RNF40-208ENST00000565995 DEFB130BP0DP73 79 aa8.86□□□□□ -0.99
RNF40-208ENST00000565995 DEFB130AP0DP74 79 aa8.86□□□□□ -0.99
RNF40-208ENST00000565995 S100A7P31151 101 aa8.86□□□□□ -0.99
RNF40-208ENST00000565995 TTC32Q5I0X7 151 aa8.86□□□□□ -0.99
RNF40-208ENST00000565995 GCSAMLQ5JQS6 135 aa8.86□□□□□ -0.99
RNF40-208ENST00000565995 PXDC1Q5TGL8 231 aa8.86□□□□□ -0.99
RNF40-208ENST00000565995 FAM122CQ6P4D5 195 aa8.86□□□□□ -0.99
RNF40-208ENST00000565995 SSX7Q7RTT5 188 aa8.86□□□□□ -0.99
RNF40-208ENST00000565995 S100A7AQ86SG5 101 aa8.86□□□□□ -0.99
RNF40-208ENST00000565995 OR8I2Q8N0Y5 310 aa8.86□□□□□ -0.99
RNF40-208ENST00000565995 OR10G4Q8NGN3 311 aa8.86□□□□□ -0.99
RNF40-208ENST00000565995 OR10G9Q8NGN4 311 aa8.86□□□□□ -0.99
RNF40-208ENST00000565995 OR10G7Q8NGN6 311 aa8.86□□□□□ -0.99
RNF40-208ENST00000565995 RNF141Q8WVD5 230 aa8.86□□□□□ -0.99
RNF40-208ENST00000565995 ZNF503Q96F45 646 aa8.86□□□□□ -0.99
RNF40-208ENST00000565995 PHYHIPLQ96FC7 376 aa8.86□□□□□ -0.99
RNF40-208ENST00000565995 UHRF2Q96PU4 802 aa8.86□□□□□ -0.99
RNF40-208ENST00000565995 A0A1W2PPV4 95 aa8.85□□□□□ -0.99
RNF40-208ENST00000565995 DUSP14O95147 198 aaKnown RBP8.85□□□□□ -0.99
RNF40-208ENST00000565995 INSP01308 110 aa8.85□□□□□ -0.99
RNF40-208ENST00000565995 IFNA7P01567 189 aa8.85□□□□□ -0.99
RNF40-208ENST00000565995 AZU1P20160 251 aa8.85□□□□□ -0.99
RNF40-208ENST00000565995 M6PRP20645 277 aa8.85□□□□□ -0.99
RNF40-208ENST00000565995 FAM74A1Q5RGS3 127 aa8.85□□□□□ -0.99
RNF40-208ENST00000565995 FAM213BQ8TBF2 198 aa8.85□□□□□ -0.99
RNF40-208ENST00000565995 C16orf92Q96LL3 132 aa8.85□□□□□ -0.99
RNF40-208ENST00000565995 SLC25A22Q9H936 323 aa8.85□□□□□ -0.99
RNF40-208ENST00000565995 UMAD1C9J7I0 102 aa8.84□□□□□ -0.99
RNF40-208ENST00000565995 INAFM2P0DMQ5 153 aa8.84□□□□□ -0.99
RNF40-208ENST00000565995 CDC34P49427 236 aaPredicted RBP8.84□□□□□ -0.99
RNF40-208ENST00000565995 CNN1P51911 297 aaKnown RBP8.84□□□□□ -0.99
RNF40-208ENST00000565995 RHOBP62745 196 aa8.84□□□□□ -0.99
RNF40-208ENST00000565995 TEX261Q6UWH6 196 aa8.84□□□□□ -0.99
RNF40-208ENST00000565995 LINC00305Q7Z4B0 112 aa8.84□□□□□ -0.99
RNF40-208ENST00000565995 LYPD1Q8N2G4 141 aa8.84□□□□□ -0.99
RNF40-208ENST00000565995 TMEM256Q8N2U0 113 aa8.84□□□□□ -0.99
RNF40-208ENST00000565995 MRPL32Q9BYC8 188 aaKnown RBP8.84□□□□□ -0.99
RNF40-208ENST00000565995 DNAJC4Q9NNZ3 241 aa8.84□□□□□ -0.99
RNF40-208ENST00000565995 M0R2Z0 102 aa8.83□□□□□ -1
RNF40-208ENST00000565995 GALR1P47211 349 aa8.83□□□□□ -1
RNF40-208ENST00000565995 PLP1P60201 277 aa8.83□□□□□ -1
RNF40-208ENST00000565995 SPINK13Q1W4C9 94 aa8.83□□□□□ -1
RNF40-208ENST00000565995 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.83□□□□□ -1
RNF40-208ENST00000565995 IQCF2Q8IXL9 164 aa8.83□□□□□ -1
RNF40-208ENST00000565995 TMEM37Q8WXS4 190 aa8.83□□□□□ -1
RNF40-208ENST00000565995 ACTR3CQ9C0K3 210 aaPredicted RBP8.83□□□□□ -1
RNF40-208ENST00000565995 FUT9Q9Y231 359 aa8.83□□□□□ -1
RNF40-208ENST00000565995 FLG2Q5D862 2391 aaPredicted RBP8.82□□□□□ -1
RNF40-208ENST00000565995 ZNF98A6NK75 572 aa8.82□□□□□ -1
RNF40-208ENST00000565995 H3BNG1 76 aa8.82□□□□□ -1
RNF40-208ENST00000565995 H3BRN7 92 aa8.82□□□□□ -1
RNF40-208ENST00000565995 HMGB3O15347 200 aaKnown RBP8.82□□□□□ -1
RNF40-208ENST00000565995 EIF3GO75821 320 aaKnown RBP eCLIP8.82□□□□□ -1
RNF40-208ENST00000565995 SULT1A2P50226 295 aa8.82□□□□□ -1
RNF40-208ENST00000565995 RAB5CP51148 216 aa8.82□□□□□ -1
RNF40-208ENST00000565995 XGP55808 180 aa8.82□□□□□ -1
RNF40-208ENST00000565995 TAS2R45P59539 299 aa8.82□□□□□ -1
RNF40-208ENST00000565995 TAS2R60P59551 318 aa8.82□□□□□ -1
RNF40-208ENST00000565995 KHDC3LQ587J8 217 aa8.82□□□□□ -1
RNF40-208ENST00000565995 PATE2Q6UY27 113 aa8.82□□□□□ -1
RNF40-208ENST00000565995 DPPA3Q6W0C5 159 aa8.82□□□□□ -1
RNF40-208ENST00000565995 ZNF493Q6ZR52 646 aa8.82□□□□□ -1
RNF40-208ENST00000565995 Q6ZRN7 208 aaPredicted RBP8.82□□□□□ -1
RNF40-208ENST00000565995 MIR17HGQ75NE6 70 aa8.82□□□□□ -1
RNF40-208ENST00000565995 LINC00612Q8N6U2 182 aa8.82□□□□□ -1
RNF40-208ENST00000565995 ZNF680Q8NEM1 530 aa8.82□□□□□ -1
RNF40-208ENST00000565995 C16orf74Q96GX8 76 aa8.82□□□□□ -1
RNF40-208ENST00000565995 GPR82Q96P67 336 aa8.82□□□□□ -1
RNF40-208ENST00000565995 SLC25A39Q9BZJ4 359 aaPredicted RBP8.82□□□□□ -1
RNF40-208ENST00000565995 PGPEP1Q9NXJ5 209 aa8.82□□□□□ -1
RNF40-208ENST00000565995 RNF24Q9Y225 148 aa8.82□□□□□ -1
RNF40-208ENST00000565995 TIMM8BQ9Y5J9 83 aaPredicted RBP8.82□□□□□ -1
RNF40-208ENST00000565995 TRAV8-2A0A0B4J237 113 aa8.81□□□□□ -1
RNF40-208ENST00000565995 CTXND1A0A1B0GTU2 59 aa8.81□□□□□ -1
RNF40-208ENST00000565995 A0A1B0GV50 99 aa8.81□□□□□ -1
RNF40-208ENST00000565995 MAP1LC3B2A6NCE7 125 aa8.81□□□□□ -1
RNF40-208ENST00000565995 OR7C2O60412 319 aa8.81□□□□□ -1
RNF40-208ENST00000565995 FHITP49789 147 aa8.81□□□□□ -1
RNF40-208ENST00000565995 ESRGQ1W209 222 aa8.81□□□□□ -1
RNF40-208ENST00000565995 RXFP4Q8TDU9 374 aa8.81□□□□□ -1
RNF40-208ENST00000565995 SHANK2-AS3Q9BTD1 123 aa8.81□□□□□ -1
RNF40-208ENST00000565995 MAP1LC3BQ9GZQ8 125 aa8.81□□□□□ -1
RNF40-208ENST00000565995 TRAV5A0A0B4J249 113 aa8.8□□□□□ -1
RNF40-208ENST00000565995 RAB14P61106 215 aa8.8□□□□□ -1
RNF40-208ENST00000565995 MORN5Q5VZ52 161 aa8.8□□□□□ -1
RNF40-208ENST00000565995 LCN15Q6UWW0 184 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms