RNA–Protein interactions for RNA: ENST00000564774.5

TAF1C-212, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit C, human

TSL 2

Gene TAF1C, Length 4,637 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF1C-212	ENST00000564774	POU2AF1	Q16633	256 aa		10.9	□□□□□ -0.66
TAF1C-212	ENST00000564774	LINC00469	Q8N7U9	141 aa		10.9	□□□□□ -0.66
TAF1C-212	ENST00000564774	IGHV3-64	A0A075B6Q5	118 aa		10.89	□□□□□ -0.67
TAF1C-212	ENST00000564774	APOM	O95445	188 aa		10.89	□□□□□ -0.67
TAF1C-212	ENST00000564774	C22orf34	Q6ZV56	151 aa		10.89	□□□□□ -0.67
TAF1C-212	ENST00000564774		Q86TA4	180 aa		10.89	□□□□□ -0.67
TAF1C-212	ENST00000564774	HAPLN4	Q86UW8	402 aa		10.89	□□□□□ -0.67
TAF1C-212	ENST00000564774	MRAP	Q8TCY5	172 aa		10.89	□□□□□ -0.67
TAF1C-212	ENST00000564774	GNB1L	Q9BYB4	327 aa		10.89	□□□□□ -0.67
TAF1C-212	ENST00000564774	ACAN	P16112	2415 aa		10.89	□□□□□ -0.67
TAF1C-212	ENST00000564774	LYL1	P12980	280 aa		10.89	□□□□□ -0.67
TAF1C-212	ENST00000564774	HOXD3	P31249	432 aa	Predicted RBP	10.89	□□□□□ -0.67
TAF1C-212	ENST00000564774	C1orf194	Q5T5A4	169 aa		10.89	□□□□□ -0.67
TAF1C-212	ENST00000564774	CHD3	Q12873	2000 aa	Known RBP	10.89	□□□□□ -0.67
TAF1C-212	ENST00000564774	ALPK3	Q96L96	1907 aa		10.89	□□□□□ -0.67
TAF1C-212	ENST00000564774	CCL24	O00175	119 aa		10.89	□□□□□ -0.67
TAF1C-212	ENST00000564774	FABP2	P12104	132 aa		10.89	□□□□□ -0.67
TAF1C-212	ENST00000564774	HIST2H2BC	Q6DN03	193 aa		10.89	□□□□□ -0.67
TAF1C-212	ENST00000564774	ATP5L2	Q7Z4Y8	100 aa		10.89	□□□□□ -0.67
TAF1C-212	ENST00000564774	NIT1	Q86X76	327 aa		10.89	□□□□□ -0.67
TAF1C-212	ENST00000564774	NUP35	Q8NFH5	326 aa		10.89	□□□□□ -0.67
TAF1C-212	ENST00000564774	IFI27L1	Q96BM0	104 aa		10.89	□□□□□ -0.67
TAF1C-212	ENST00000564774	IGLC7	A0M8Q6	106 aa		10.89	□□□□□ -0.67
TAF1C-212	ENST00000564774	PTPRS	Q13332	1948 aa		10.88	□□□□□ -0.67
TAF1C-212	ENST00000564774	IGHV3-16	A0A0C4DH30	117 aa		10.88	□□□□□ -0.67
TAF1C-212	ENST00000564774	GAGE10	A6NGK3	116 aa		10.88	□□□□□ -0.67
TAF1C-212	ENST00000564774	DAD1	P61803	113 aa		10.88	□□□□□ -0.67
TAF1C-212	ENST00000564774	CD300E	Q496F6	205 aa	Predicted RBP	10.88	□□□□□ -0.67
TAF1C-212	ENST00000564774	AMN1	Q8IY45	258 aa		10.88	□□□□□ -0.67
TAF1C-212	ENST00000564774	TSSC4	Q9Y5U2	329 aa	Predicted RBP	10.88	□□□□□ -0.67
TAF1C-212	ENST00000564774	SMKR1	H3BMG3	65 aa		10.87	□□□□□ -0.67
TAF1C-212	ENST00000564774	HIST1H2BK	O60814	126 aa		10.87	□□□□□ -0.67
TAF1C-212	ENST00000564774	HIST1H2BJ	P06899	126 aa		10.87	□□□□□ -0.67
TAF1C-212	ENST00000564774	CXCL1	P09341	107 aa		10.87	□□□□□ -0.67
TAF1C-212	ENST00000564774	HIST1H2BO	P23527	126 aa		10.87	□□□□□ -0.67
TAF1C-212	ENST00000564774	HIST1H2BB	P33778	126 aa		10.87	□□□□□ -0.67
TAF1C-212	ENST00000564774	HIST1H2BD	P58876	126 aa		10.87	□□□□□ -0.67
TAF1C-212	ENST00000564774	HIST1H2BC	P62807	126 aa		10.87	□□□□□ -0.67
TAF1C-212	ENST00000564774	HIST2H2BE	Q16778	126 aa		10.87	□□□□□ -0.67
TAF1C-212	ENST00000564774	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	10.87	□□□□□ -0.67
TAF1C-212	ENST00000564774	DMRTA1	Q5VZB9	504 aa		10.87	□□□□□ -0.67
TAF1C-212	ENST00000564774	HIST1H2BH	Q93079	126 aa		10.87	□□□□□ -0.67
TAF1C-212	ENST00000564774	HIST1H2BN	Q99877	126 aa		10.87	□□□□□ -0.67
TAF1C-212	ENST00000564774	HIST1H2BM	Q99879	126 aa		10.87	□□□□□ -0.67
TAF1C-212	ENST00000564774	TRBV24-1	A0A075B6N3	115 aa		10.87	□□□□□ -0.67
TAF1C-212	ENST00000564774	IGHV7-81	A0A0B4J1V7	117 aa		10.87	□□□□□ -0.67
TAF1C-212	ENST00000564774	PSCA	O43653	123 aa		10.87	□□□□□ -0.67
TAF1C-212	ENST00000564774	MCRIP2	Q9BUT9	160 aa	Known RBP	10.87	□□□□□ -0.67
TAF1C-212	ENST00000564774	LSM4	Q9Y4Z0	139 aa	Known RBP	10.87	□□□□□ -0.67
TAF1C-212	ENST00000564774	PRRC2C	Q9Y520	2896 aa	Known RBP	10.87	□□□□□ -0.67
TAF1C-212	ENST00000564774	TRBV7-9	A0A0J9YWB2	115 aa		10.87	□□□□□ -0.67
TAF1C-212	ENST00000564774	GAGE12B	A1L429	117 aa		10.87	□□□□□ -0.67
TAF1C-212	ENST00000564774	GAGE7	O76087	117 aa		10.87	□□□□□ -0.67
TAF1C-212	ENST00000564774	GAGE12F	P0CL80	117 aa		10.87	□□□□□ -0.67
TAF1C-212	ENST00000564774	GAGE12G	P0CL81	117 aa		10.87	□□□□□ -0.67
TAF1C-212	ENST00000564774	GAGE12I	P0CL82	117 aa		10.87	□□□□□ -0.67
TAF1C-212	ENST00000564774	DDT	P30046	118 aa		10.87	□□□□□ -0.67
TAF1C-212	ENST00000564774	ZNF491	Q8N8L2	437 aa		10.87	□□□□□ -0.67
TAF1C-212	ENST00000564774	TMEM190	Q8WZ59	177 aa		10.87	□□□□□ -0.67
TAF1C-212	ENST00000564774	PARD6G	Q9BYG4	376 aa	Predicted RBP	10.87	□□□□□ -0.67
TAF1C-212	ENST00000564774	C11orf68	Q9H3H3	251 aa	Known RBP	10.87	□□□□□ -0.67
TAF1C-212	ENST00000564774	MRPS16	Q9Y3D3	137 aa	Known RBP	10.87	□□□□□ -0.67
TAF1C-212	ENST00000564774	DENND4A	Q7Z401	1863 aa		10.87	□□□□□ -0.67
TAF1C-212	ENST00000564774	IGHV7-4-1	A0A0J9YVY3	117 aa		10.86	□□□□□ -0.67
TAF1C-212	ENST00000564774	OR5A1	Q8NGJ0	315 aa		10.86	□□□□□ -0.67
TAF1C-212	ENST00000564774	LBH	Q53QV2	105 aa	Predicted RBP	10.86	□□□□□ -0.67
TAF1C-212	ENST00000564774	SSBP2	P81877	361 aa	Predicted RBP	10.86	□□□□□ -0.67
TAF1C-212	ENST00000564774	C8orf31	Q8N9H6	132 aa		10.86	□□□□□ -0.67
TAF1C-212	ENST00000564774	CSTL1	Q9H114	145 aa		10.86	□□□□□ -0.67
TAF1C-212	ENST00000564774	TRAV13-1	A0A0B4J241	112 aa		10.86	□□□□□ -0.67
TAF1C-212	ENST00000564774	VCY	O14598	125 aa		10.86	□□□□□ -0.67
TAF1C-212	ENST00000564774	CDKN1B	P46527	198 aa		10.86	□□□□□ -0.67
TAF1C-212	ENST00000564774	CTAG1A	P78358	180 aa		10.86	□□□□□ -0.67
TAF1C-212	ENST00000564774	KRTAP27-1	Q3LI81	207 aa		10.86	□□□□□ -0.67
TAF1C-212	ENST00000564774	MS4A6A	Q9H2W1	248 aa		10.86	□□□□□ -0.67
TAF1C-212	ENST00000564774		F6UB75	175 aa		10.85	□□□□□ -0.67
TAF1C-212	ENST00000564774	LAGE3	Q14657	143 aa		10.85	□□□□□ -0.67
TAF1C-212	ENST00000564774	GGTLC3	B5MD39	225 aa		10.85	□□□□□ -0.67
TAF1C-212	ENST00000564774	DPM2	O94777	84 aa		10.85	□□□□□ -0.67
TAF1C-212	ENST00000564774	SMIM13	P0DJ93	91 aa		10.85	□□□□□ -0.67
TAF1C-212	ENST00000564774	FAM90A2P	Q658T7	463 aa		10.85	□□□□□ -0.67
TAF1C-212	ENST00000564774	ZNF843	Q8N446	348 aa		10.85	□□□□□ -0.67
TAF1C-212	ENST00000564774	RITA1	Q96K30	269 aa		10.85	□□□□□ -0.67
TAF1C-212	ENST00000564774	TMEM242	Q9NWH2	141 aa		10.85	□□□□□ -0.67
TAF1C-212	ENST00000564774	SMPX	Q9UHP9	88 aa		10.85	□□□□□ -0.67
TAF1C-212	ENST00000564774	GAGE12J	A6NER3	117 aa		10.84	□□□□□ -0.67
TAF1C-212	ENST00000564774	PFN1	P07737	140 aa	Known RBP	10.84	□□□□□ -0.67
TAF1C-212	ENST00000564774	GAGE1	Q13065	139 aa		10.84	□□□□□ -0.67
TAF1C-212	ENST00000564774	GAGE4	Q13068	117 aa		10.84	□□□□□ -0.67
TAF1C-212	ENST00000564774	GAGE5	Q13069	117 aa		10.84	□□□□□ -0.67
TAF1C-212	ENST00000564774	GAGE13	Q4V321	117 aa		10.84	□□□□□ -0.67
TAF1C-212	ENST00000564774	C8orf49	Q96NF6	230 aa		10.84	□□□□□ -0.67
TAF1C-212	ENST00000564774	AMBP	P02760	352 aa		10.84	□□□□□ -0.67
TAF1C-212	ENST00000564774	SLURP1	P55000	103 aa		10.84	□□□□□ -0.67
TAF1C-212	ENST00000564774	SFTA2	Q6UW10	78 aa		10.84	□□□□□ -0.67
TAF1C-212	ENST00000564774		Q8N7P7	452 aa		10.84	□□□□□ -0.67
TAF1C-212	ENST00000564774	LGALS1	P09382	135 aa	Known RBP	10.83	□□□□□ -0.68
TAF1C-212	ENST00000564774	PRR25	Q96S07	402 aa		10.83	□□□□□ -0.68
TAF1C-212	ENST00000564774	MRPL16	Q9NX20	251 aa	Known RBP	10.83	□□□□□ -0.68
TAF1C-212	ENST00000564774	LY96	Q9Y6Y9	160 aa		10.83	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms