RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 NXPH4O95158 308 aa14.34□□□□□ -0.11
HERC2-204ENST00000563945 BAXQ07812 192 aa14.34□□□□□ -0.11
HERC2-204ENST00000563945 NFE4Q86UQ8 179 aa14.34□□□□□ -0.11
HERC2-204ENST00000563945 C11orf72Q8NBR9 251 aa14.34□□□□□ -0.11
HERC2-204ENST00000563945 LINC00467Q9BRT7 94 aa14.34□□□□□ -0.11
HERC2-204ENST00000563945 AAMDCQ9H7C9 122 aa14.34□□□□□ -0.11
HERC2-204ENST00000563945 SLC39A9Q9NUM3 307 aa14.34□□□□□ -0.11
HERC2-204ENST00000563945 TRAV9-2A0A087WT02 112 aa14.33□□□□□ -0.12
HERC2-204ENST00000563945 IFNA5P01569 189 aa14.33□□□□□ -0.12
HERC2-204ENST00000563945 HIST1H1EP10412 219 aaKnown RBP14.33□□□□□ -0.12
HERC2-204ENST00000563945 RPL29P47914 159 aaKnown RBP14.33□□□□□ -0.12
HERC2-204ENST00000563945 BTN1A1Q13410 526 aa14.33□□□□□ -0.12
HERC2-204ENST00000563945 WDR83OSQ9Y284 106 aa14.33□□□□□ -0.12
HERC2-204ENST00000563945 KLF12Q9Y4X4 402 aa14.33□□□□□ -0.12
HERC2-204ENST00000563945 FAM24AA6NFZ4 105 aa14.32□□□□□ -0.12
HERC2-204ENST00000563945 SPINK4O60575 86 aa14.32□□□□□ -0.12
HERC2-204ENST00000563945 IGHV3-53P01767 116 aa14.32□□□□□ -0.12
HERC2-204ENST00000563945 TCL1AP56279 114 aa14.32□□□□□ -0.12
HERC2-204ENST00000563945 CD300CQ08708 224 aa14.32□□□□□ -0.12
HERC2-204ENST00000563945 TMEM78Q5T7P6 136 aa14.32□□□□□ -0.12
HERC2-204ENST00000563945 CDPF1Q6NVV7 123 aa14.32□□□□□ -0.12
HERC2-204ENST00000563945 BLNKQ8WV28 456 aa14.32□□□□□ -0.12
HERC2-204ENST00000563945 ARPC5LQ9BPX5 153 aa14.32□□□□□ -0.12
HERC2-204ENST00000563945 AGPAT4-IT1Q9H0P7 198 aa14.32□□□□□ -0.12
HERC2-204ENST00000563945 PRO0255Q9UI72 69 aa14.32□□□□□ -0.12
HERC2-204ENST00000563945 UBE2L5PA0A1B0GUS4 154 aa14.31□□□□□ -0.12
HERC2-204ENST00000563945 KLLNB2CW77 178 aa14.31□□□□□ -0.12
HERC2-204ENST00000563945 INAFM2P0DMQ5 153 aa14.31□□□□□ -0.12
HERC2-204ENST00000563945 S100A11P31949 105 aa14.31□□□□□ -0.12
HERC2-204ENST00000563945 HBG1P69891 147 aa14.31□□□□□ -0.12
HERC2-204ENST00000563945 HBG2P69892 147 aa14.31□□□□□ -0.12
HERC2-204ENST00000563945 PDE6HQ13956 83 aa14.31□□□□□ -0.12
HERC2-204ENST00000563945 MRPL23Q16540 153 aaKnown RBP14.31□□□□□ -0.12
HERC2-204ENST00000563945 ST6GAL2Q96JF0 529 aa14.31□□□□□ -0.12
HERC2-204ENST00000563945 TMEM14CQ9P0S9 112 aa14.31□□□□□ -0.12
HERC2-204ENST00000563945 IBA57Q5T440 356 aaKnown RBP14.3□□□□□ -0.12
HERC2-204ENST00000563945 Q6ZRN7 208 aaPredicted RBP14.3□□□□□ -0.12
HERC2-204ENST00000563945 STX12Q86Y82 276 aa14.3□□□□□ -0.12
HERC2-204ENST00000563945 HHLA3Q9XRX5 114 aa14.3□□□□□ -0.12
HERC2-204ENST00000563945 NMBP08949 121 aa14.29□□□□□ -0.12
HERC2-204ENST00000563945 FGF7P21781 194 aa14.29□□□□□ -0.12
HERC2-204ENST00000563945 SULT1A1P50225 295 aa14.29□□□□□ -0.12
HERC2-204ENST00000563945 S100A10P60903 97 aa14.29□□□□□ -0.12
HERC2-204ENST00000563945 GPN1Q9HCN4 374 aaPredicted RBP14.29□□□□□ -0.12
HERC2-204ENST00000563945 MRPL16Q9NX20 251 aaKnown RBP14.29□□□□□ -0.12
HERC2-204ENST00000563945 IGHV1OR15-1A0A075B7D0 117 aa14.28□□□□□ -0.12
HERC2-204ENST00000563945 CRISP2P16562 243 aa14.28□□□□□ -0.12
HERC2-204ENST00000563945 BTCP35070 178 aa14.28□□□□□ -0.12
HERC2-204ENST00000563945 ATP6V1FQ16864 119 aa14.28□□□□□ -0.12
HERC2-204ENST00000563945 LYPD5Q6UWN5 251 aa14.28□□□□□ -0.12
HERC2-204ENST00000563945 NEGR1Q7Z3B1 354 aa14.28□□□□□ -0.12
HERC2-204ENST00000563945 LYPD1Q8N2G4 141 aa14.28□□□□□ -0.12
HERC2-204ENST00000563945 EXOC3-AS1Q8N2X6 119 aa14.28□□□□□ -0.12
HERC2-204ENST00000563945 FRZBQ92765 325 aa14.28□□□□□ -0.12
HERC2-204ENST00000563945 FAM19A4Q96LR4 140 aa14.28□□□□□ -0.12
HERC2-204ENST00000563945 C2orf50Q96LR7 162 aa14.28□□□□□ -0.12
HERC2-204ENST00000563945 C8orf49Q96NF6 230 aa14.28□□□□□ -0.12
HERC2-204ENST00000563945 LY96Q9Y6Y9 160 aa14.28□□□□□ -0.12
HERC2-204ENST00000563945 TRGV4A0A0C4DH28 118 aa14.27□□□□□ -0.13
HERC2-204ENST00000563945 PRAF2O60831 178 aa14.27□□□□□ -0.13
HERC2-204ENST00000563945 NDUFB4O95168 129 aa14.27□□□□□ -0.13
HERC2-204ENST00000563945 PYYP10082 97 aa14.27□□□□□ -0.13
HERC2-204ENST00000563945 FUSP35637 526 aaKnown RBP eCLIP14.27□□□□□ -0.13
HERC2-204ENST00000563945 CRYBA4P53673 196 aa14.27□□□□□ -0.13
HERC2-204ENST00000563945 ICAM4Q14773 271 aa14.27□□□□□ -0.13
HERC2-204ENST00000563945 VWC2Q2TAL6 325 aa14.27□□□□□ -0.13
HERC2-204ENST00000563945 FAM122CQ6P4D5 195 aa14.27□□□□□ -0.13
HERC2-204ENST00000563945 C9orf47Q6ZRZ4 202 aa14.27□□□□□ -0.13
HERC2-204ENST00000563945 TNFRSF18Q9Y5U5 241 aa14.27□□□□□ -0.13
HERC2-204ENST00000563945 IGKV2-40A0A087WW87 121 aaPredicted RBP14.26□□□□□ -0.13
HERC2-204ENST00000563945 IGKV2D-40P01614 121 aaPredicted RBP14.26□□□□□ -0.13
HERC2-204ENST00000563945 IL7P13232 177 aa14.26□□□□□ -0.13
HERC2-204ENST00000563945 ZNF415Q09FC8 603 aa14.26□□□□□ -0.13
HERC2-204ENST00000563945 CHAC2Q8WUX2 184 aa14.26□□□□□ -0.13
HERC2-204ENST00000563945 PCNPQ8WW12 178 aaKnown RBP14.26□□□□□ -0.13
HERC2-204ENST00000563945 VGLL1Q99990 258 aa14.26□□□□□ -0.13
HERC2-204ENST00000563945 LYRM2Q9NU23 88 aaPredicted RBP14.26□□□□□ -0.13
HERC2-204ENST00000563945 TP53TG3Q9ULZ0 132 aa14.26□□□□□ -0.13
HERC2-204ENST00000563945 E5RGE8 158 aa14.25□□□□□ -0.13
HERC2-204ENST00000563945 EVI2AP22794 236 aa14.25□□□□□ -0.13
HERC2-204ENST00000563945 TMEM252Q8N6L7 170 aa14.25□□□□□ -0.13
HERC2-204ENST00000563945 TRAV6A0A075B6T7 132 aa14.24□□□□□ -0.13
HERC2-204ENST00000563945 SRIP30626 198 aa14.24□□□□□ -0.13
HERC2-204ENST00000563945 ZFAND2AQ8N6M9 145 aa14.24□□□□□ -0.13
HERC2-204ENST00000563945 SDHCQ99643 169 aaPredicted RBP14.24□□□□□ -0.13
HERC2-204ENST00000563945 SEC22CQ9BRL7 303 aa14.24□□□□□ -0.13
HERC2-204ENST00000563945 ZNF492Q9P255 531 aa14.24□□□□□ -0.13
HERC2-204ENST00000563945 A0A087WTM6 91 aa14.23□□□□□ -0.13
HERC2-204ENST00000563945 IGSF23A1L1A6 192 aa14.23□□□□□ -0.13
HERC2-204ENST00000563945 K7EP13 123 aa14.23□□□□□ -0.13
HERC2-204ENST00000563945 LYRM1O43325 122 aa14.23□□□□□ -0.13
HERC2-204ENST00000563945 TCRBP04435 133 aa14.23□□□□□ -0.13
HERC2-204ENST00000563945 NBEAP1P0C6P0 100 aa14.23□□□□□ -0.13
HERC2-204ENST00000563945 CSN1S1P47710 185 aa14.23□□□□□ -0.13
HERC2-204ENST00000563945 ZNF138P52744 262 aa14.23□□□□□ -0.13
HERC2-204ENST00000563945 XGP55808 180 aa14.23□□□□□ -0.13
HERC2-204ENST00000563945 FHL2Q14192 279 aa14.23□□□□□ -0.13
HERC2-204ENST00000563945 MRPL32Q9BYC8 188 aaKnown RBP14.23□□□□□ -0.13
HERC2-204ENST00000563945 C11orf1Q9H5F2 150 aa14.23□□□□□ -0.13
HERC2-204ENST00000563945 MSRB1Q9NZV6 116 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms