RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 C12orf45Q8N5I9 185 aaPredicted RBP12.71□□□□□ -0.37
NME3-204ENST00000563498 MITD1Q8WV92 249 aa12.71□□□□□ -0.37
NME3-204ENST00000563498 SRRQ9GZT4 340 aa12.71□□□□□ -0.37
NME3-204ENST00000563498 PRELID1Q9Y255 219 aa12.71□□□□□ -0.37
NME3-204ENST00000563498 TNFRSF18Q9Y5U5 241 aa12.71□□□□□ -0.37
NME3-204ENST00000563498 M0R3E3 92 aa12.7□□□□□ -0.38
NME3-204ENST00000563498 MPDU1O75352 247 aa12.7□□□□□ -0.38
NME3-204ENST00000563498 CRISP2P16562 243 aa12.7□□□□□ -0.38
NME3-204ENST00000563498 KRTAP10-1P60331 282 aa12.7□□□□□ -0.38
NME3-204ENST00000563498 ERCC8Q13216 396 aa12.7□□□□□ -0.38
NME3-204ENST00000563498 BTN1A1Q13410 526 aa12.7□□□□□ -0.38
NME3-204ENST00000563498 PDE6HQ13956 83 aa12.7□□□□□ -0.38
NME3-204ENST00000563498 MRPL23Q16540 153 aaKnown RBP12.7□□□□□ -0.38
NME3-204ENST00000563498 VGLL1Q99990 258 aa12.7□□□□□ -0.38
NME3-204ENST00000563498 AGPAT4-IT1Q9H0P7 198 aa12.7□□□□□ -0.38
NME3-204ENST00000563498 TMEM14CQ9P0S9 112 aa12.7□□□□□ -0.38
NME3-204ENST00000563498 WDR83OSQ9Y284 106 aa12.7□□□□□ -0.38
NME3-204ENST00000563498 L7N2F9 121 aa12.69□□□□□ -0.38
NME3-204ENST00000563498 RNASE4P34096 147 aaKnown RBP12.69□□□□□ -0.38
NME3-204ENST00000563498 INPP1P49441 399 aa12.69□□□□□ -0.38
NME3-204ENST00000563498 CRYBA4P53673 196 aa12.69□□□□□ -0.38
NME3-204ENST00000563498 VAMP2P63027 116 aa12.69□□□□□ -0.38
NME3-204ENST00000563498 SPANXN2Q5MJ10 180 aa12.69□□□□□ -0.38
NME3-204ENST00000563498 HHLA3Q9XRX5 114 aa12.69□□□□□ -0.38
NME3-204ENST00000563498 NDUFB4O95168 129 aa12.68□□□□□ -0.38
NME3-204ENST00000563498 GPX1P07203 203 aa12.68□□□□□ -0.38
NME3-204ENST00000563498 DNAH10OSP0CZ25 163 aa12.68□□□□□ -0.38
NME3-204ENST00000563498 RPL29P47914 159 aaKnown RBP12.68□□□□□ -0.38
NME3-204ENST00000563498 ICAM4Q14773 271 aa12.68□□□□□ -0.38
NME3-204ENST00000563498 VWC2Q2TAL6 325 aa12.68□□□□□ -0.38
NME3-204ENST00000563498 TRIQKQ629K1 86 aa12.68□□□□□ -0.38
NME3-204ENST00000563498 C9orf47Q6ZRZ4 202 aa12.68□□□□□ -0.38
NME3-204ENST00000563498 NEGR1Q7Z3B1 354 aa12.68□□□□□ -0.38
NME3-204ENST00000563498 UQCC1Q9NVA1 299 aa12.68□□□□□ -0.38
NME3-204ENST00000563498 LY96Q9Y6Y9 160 aa12.68□□□□□ -0.38
NME3-204ENST00000563498 IGHV3-53P01767 116 aa12.67□□□□□ -0.38
NME3-204ENST00000563498 HIST1H1EP10412 219 aaKnown RBP12.67□□□□□ -0.38
NME3-204ENST00000563498 FHL2Q14192 279 aa12.67□□□□□ -0.38
NME3-204ENST00000563498 BAK1Q16611 211 aa12.67□□□□□ -0.38
NME3-204ENST00000563498 CHAC2Q8WUX2 184 aa12.67□□□□□ -0.38
NME3-204ENST00000563498 C20orf85Q9H1P6 137 aa12.67□□□□□ -0.38
NME3-204ENST00000563498 SLC39A9Q9NUM3 307 aa12.67□□□□□ -0.38
NME3-204ENST00000563498 MRPL16Q9NX20 251 aaKnown RBP12.67□□□□□ -0.38
NME3-204ENST00000563498 TIMM9Q9Y5J7 89 aa12.67□□□□□ -0.38
NME3-204ENST00000563498 RGS13O14921 159 aa12.66□□□□□ -0.38
NME3-204ENST00000563498 CST7O76096 145 aa12.66□□□□□ -0.38
NME3-204ENST00000563498 BTCP35070 178 aa12.66□□□□□ -0.38
NME3-204ENST00000563498 BCAP31P51572 246 aa12.66□□□□□ -0.38
NME3-204ENST00000563498 CAV2P51636 162 aa12.66□□□□□ -0.38
NME3-204ENST00000563498 ZNF846Q147U1 533 aa12.66□□□□□ -0.38
NME3-204ENST00000563498 CNPY1Q3B7I2 92 aa12.66□□□□□ -0.38
NME3-204ENST00000563498 ZFAND2AQ8N6M9 145 aa12.66□□□□□ -0.38
NME3-204ENST00000563498 C8orf49Q96NF6 230 aa12.66□□□□□ -0.38
NME3-204ENST00000563498 MSRB1Q9NZV6 116 aa12.66□□□□□ -0.38
NME3-204ENST00000563498 TP53TG3Q9ULZ0 132 aa12.66□□□□□ -0.38
NME3-204ENST00000563498 MYCBP2O75592 4640 aa12.66□□□□□ -0.38
NME3-204ENST00000563498 VPS13BQ7Z7G8 4022 aa12.65□□□□□ -0.38
NME3-204ENST00000563498 IGHV1OR15-1A0A075B7D0 117 aa12.65□□□□□ -0.38
NME3-204ENST00000563498 CENPXA8MT69 81 aa12.65□□□□□ -0.38
NME3-204ENST00000563498 PRAF2O60831 178 aa12.65□□□□□ -0.38
NME3-204ENST00000563498 GCSHP23434 173 aa12.65□□□□□ -0.38
NME3-204ENST00000563498 ARPC5LQ9BPX5 153 aa12.65□□□□□ -0.38
NME3-204ENST00000563498 MRPL32Q9BYC8 188 aaKnown RBP12.65□□□□□ -0.38
NME3-204ENST00000563498 C11orf1Q9H5F2 150 aa12.65□□□□□ -0.38
NME3-204ENST00000563498 AAMDCQ9H7C9 122 aa12.65□□□□□ -0.38
NME3-204ENST00000563498 EVI2AP22794 236 aa12.64□□□□□ -0.39
NME3-204ENST00000563498 TMEM78Q5T7P6 136 aa12.64□□□□□ -0.39
NME3-204ENST00000563498 PRR9Q5T870 116 aa12.64□□□□□ -0.39
NME3-204ENST00000563498 IQCF2Q8IXL9 164 aa12.64□□□□□ -0.39
NME3-204ENST00000563498 EXOC3-AS1Q8N2X6 119 aa12.64□□□□□ -0.39
NME3-204ENST00000563498 LSM5Q9Y4Y9 91 aaKnown RBP12.64□□□□□ -0.39
NME3-204ENST00000563498 SRRM2Q9UQ35 2752 aaKnown RBP12.64□□□□□ -0.39
NME3-204ENST00000563498 TRBV7-9A0A0J9YWB2 115 aa12.63□□□□□ -0.39
NME3-204ENST00000563498 SRIP30626 198 aa12.63□□□□□ -0.39
NME3-204ENST00000563498 S100A11P31949 105 aa12.63□□□□□ -0.39
NME3-204ENST00000563498 BAXQ07812 192 aa12.63□□□□□ -0.39
NME3-204ENST00000563498 ZNF415Q09FC8 603 aa12.63□□□□□ -0.39
NME3-204ENST00000563498 ZNF492Q9P255 531 aa12.63□□□□□ -0.39
NME3-204ENST00000563498 IGKV2-40A0A087WW87 121 aaPredicted RBP12.62□□□□□ -0.39
NME3-204ENST00000563498 UBE2L5PA0A1B0GUS4 154 aa12.62□□□□□ -0.39
NME3-204ENST00000563498 FAM24AA6NFZ4 105 aa12.62□□□□□ -0.39
NME3-204ENST00000563498 FAM229AH3BQW9 127 aa12.62□□□□□ -0.39
NME3-204ENST00000563498 K7EQD1 137 aa12.62□□□□□ -0.39
NME3-204ENST00000563498 CCSO14618 274 aa12.62□□□□□ -0.39
NME3-204ENST00000563498 IGKV2D-40P01614 121 aaPredicted RBP12.62□□□□□ -0.39
NME3-204ENST00000563498 PYYP10082 97 aa12.62□□□□□ -0.39
NME3-204ENST00000563498 PVALBP20472 110 aaPredicted RBP12.62□□□□□ -0.39
NME3-204ENST00000563498 SULT1A1P50225 295 aa12.62□□□□□ -0.39
NME3-204ENST00000563498 WFDC10BQ8IUB3 73 aa12.62□□□□□ -0.39
NME3-204ENST00000563498 BLNKQ8WV28 456 aa12.62□□□□□ -0.39
NME3-204ENST00000563498 LYRM2Q9NU23 88 aaPredicted RBP12.62□□□□□ -0.39
NME3-204ENST00000563498 TRGV4A0A0C4DH28 118 aa12.61□□□□□ -0.39
NME3-204ENST00000563498 A6NHS1 94 aa12.61□□□□□ -0.39
NME3-204ENST00000563498 ORM1P02763 201 aa12.61□□□□□ -0.39
NME3-204ENST00000563498 SMR3BP02814 79 aaPredicted RBP12.61□□□□□ -0.39
NME3-204ENST00000563498 Q6ZQT7 251 aa12.61□□□□□ -0.39
NME3-204ENST00000563498 C10orf126Q8N4M7 172 aa12.61□□□□□ -0.39
NME3-204ENST00000563498 CCDC160A6NGH7 325 aa12.6□□□□□ -0.39
NME3-204ENST00000563498 FAM25EA8MYX2 175 aa12.6□□□□□ -0.39
NME3-204ENST00000563498 E5RGE8 158 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms