RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 CAMSAP2Q08AD1 1489 aa0.83□□□□□ -2.28
LINC00557-201ENST00000563184 MYH2Q9UKX2 1941 aa0.83□□□□□ -2.28
LINC00557-201ENST00000563184 SMARCA2P51531 1590 aa0.83□□□□□ -2.28
LINC00557-201ENST00000563184 ABCC8Q09428 1581 aa0.83□□□□□ -2.28
LINC00557-201ENST00000563184 CD109Q6YHK3 1445 aa0.82□□□□□ -2.28
LINC00557-201ENST00000563184 IQSEC2Q5JU85 1478 aa0.82□□□□□ -2.28
LINC00557-201ENST00000563184 ARAP1Q96P48 1450 aa0.82□□□□□ -2.28
LINC00557-201ENST00000563184 IFT140Q96RY7 1462 aa0.82□□□□□ -2.28
LINC00557-201ENST00000563184 TRAV36DV7A0A075B6V5 113 aa0.82□□□□□ -2.28
LINC00557-201ENST00000563184 TRAV27A0A087WT01 109 aa0.82□□□□□ -2.28
LINC00557-201ENST00000563184 TRBV27A0A0K0K1C4 114 aa0.82□□□□□ -2.28
LINC00557-201ENST00000563184 A0A1W2PPM0 123 aa0.82□□□□□ -2.28
LINC00557-201ENST00000563184 TMEM189A5PLL7 270 aa0.82□□□□□ -2.28
LINC00557-201ENST00000563184 OR2T8A6NH00 312 aa0.82□□□□□ -2.28
LINC00557-201ENST00000563184 H3BRM9 83 aa0.82□□□□□ -2.28
LINC00557-201ENST00000563184 J3KT08 172 aa0.82□□□□□ -2.28
LINC00557-201ENST00000563184 LINC00305Q7Z4B0 112 aa0.82□□□□□ -2.28
LINC00557-201ENST00000563184 TEN1Q86WV5 123 aa0.82□□□□□ -2.28
LINC00557-201ENST00000563184 FAM216BQ8N7L0 139 aa0.82□□□□□ -2.28
LINC00557-201ENST00000563184 CARD19Q96LW7 228 aa0.82□□□□□ -2.28
LINC00557-201ENST00000563184 GSKIPQ9P0R6 139 aa0.82□□□□□ -2.28
LINC00557-201ENST00000563184 FANCMQ8IYD8 2048 aa0.82□□□□□ -2.28
LINC00557-201ENST00000563184 SRCAPQ6ZRS2 3230 aa0.82□□□□□ -2.28
LINC00557-201ENST00000563184 THOC2Q8NI27 1593 aaKnown RBP0.82□□□□□ -2.28
LINC00557-201ENST00000563184 NESP48681 1621 aa0.82□□□□□ -2.28
LINC00557-201ENST00000563184 ZCCHC11Q5TAX3 1644 aaKnown RBP0.82□□□□□ -2.28
LINC00557-201ENST00000563184 ABCC10Q5T3U5 1492 aa0.81□□□□□ -2.28
LINC00557-201ENST00000563184 IGLV3-32A0A0A0MS00 114 aa0.81□□□□□ -2.28
LINC00557-201ENST00000563184 TRAV13-1A0A0B4J241 112 aa0.81□□□□□ -2.28
LINC00557-201ENST00000563184 DPM2O94777 84 aa0.81□□□□□ -2.28
LINC00557-201ENST00000563184 FABP2P12104 132 aa0.81□□□□□ -2.28
LINC00557-201ENST00000563184 TPT1P13693 172 aaKnown RBP0.81□□□□□ -2.28
LINC00557-201ENST00000563184 COX7CP15954 63 aa0.81□□□□□ -2.28
LINC00557-201ENST00000563184 RPL22P35268 128 aaKnown RBP0.81□□□□□ -2.28
LINC00557-201ENST00000563184 CIRBPQ14011 172 aaKnown RBP0.81□□□□□ -2.28
LINC00557-201ENST00000563184 MORN2Q502X0 79 aa0.81□□□□□ -2.28
LINC00557-201ENST00000563184 TMEM14EPQ6UXP3 125 aa0.81□□□□□ -2.28
LINC00557-201ENST00000563184 OR8I2Q8N0Y5 310 aa0.81□□□□□ -2.28
LINC00557-201ENST00000563184 OR4S1Q8NGB4 309 aa0.81□□□□□ -2.28
LINC00557-201ENST00000563184 TCEAL4Q96EI5 215 aa0.81□□□□□ -2.28
LINC00557-201ENST00000563184 HYLS1Q96M11 299 aa0.81□□□□□ -2.28
LINC00557-201ENST00000563184 RNF11Q9Y3C5 154 aa0.81□□□□□ -2.28
LINC00557-201ENST00000563184 SCRIBQ14160 1630 aa0.81□□□□□ -2.28
LINC00557-201ENST00000563184 PBRM1Q86U86 1689 aa0.81□□□□□ -2.28
LINC00557-201ENST00000563184 RTL9Q8NET4 1388 aa0.81□□□□□ -2.28
LINC00557-201ENST00000563184 TRAPPC8Q9Y2L5 1435 aa0.81□□□□□ -2.28
LINC00557-201ENST00000563184 CFTRP13569 1480 aa0.8□□□□□ -2.28
LINC00557-201ENST00000563184 GAPVD1Q14C86 1478 aa0.8□□□□□ -2.28
LINC00557-201ENST00000563184 PEG3Q9GZU2 1588 aa0.8□□□□□ -2.28
LINC00557-201ENST00000563184 TRPM1Q7Z4N2 1603 aa0.8□□□□□ -2.28
LINC00557-201ENST00000563184 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.8□□□□□ -2.28
LINC00557-201ENST00000563184 hDV103S1A0JD37 113 aa0.8□□□□□ -2.28
LINC00557-201ENST00000563184 EFCAB10A6NFE3 127 aa0.8□□□□□ -2.28
LINC00557-201ENST00000563184 GABARAPH6UMI1 98 aa0.8□□□□□ -2.28
LINC00557-201ENST00000563184 H7BYZ3 331 aa0.8□□□□□ -2.28
LINC00557-201ENST00000563184 J3QR89 54 aa0.8□□□□□ -2.28
LINC00557-201ENST00000563184 RPL7P18124 248 aaKnown RBP0.8□□□□□ -2.28
LINC00557-201ENST00000563184 EVI2AP22794 236 aa0.8□□□□□ -2.28
LINC00557-201ENST00000563184 RPS3P23396 243 aaKnown RBP eCLIP0.8□□□□□ -2.28
LINC00557-201ENST00000563184 CMPK1P30085 196 aa0.8□□□□□ -2.28
LINC00557-201ENST00000563184 ASB16-AS1Q495Z4 193 aa0.8□□□□□ -2.28
LINC00557-201ENST00000563184 CCSMST1Q4G0I0 132 aa0.8□□□□□ -2.28
LINC00557-201ENST00000563184 CCDC58Q4VC31 144 aa0.8□□□□□ -2.28
LINC00557-201ENST00000563184 ARPINQ7Z6K5 226 aa0.8□□□□□ -2.28
LINC00557-201ENST00000563184 TCTE3Q8IZS6 198 aa0.8□□□□□ -2.28
LINC00557-201ENST00000563184 OR5AS1Q8N127 324 aa0.8□□□□□ -2.28
LINC00557-201ENST00000563184 LRRC18Q8N456 261 aa0.8□□□□□ -2.28
LINC00557-201ENST00000563184 MMGT1Q8N4V1 131 aa0.8□□□□□ -2.28
LINC00557-201ENST00000563184 OR5A2Q8NGI9 324 aa0.8□□□□□ -2.28
LINC00557-201ENST00000563184 OR51A4Q8NGJ6 313 aa0.8□□□□□ -2.28
LINC00557-201ENST00000563184 OR10AG1Q8NH19 301 aa0.8□□□□□ -2.28
LINC00557-201ENST00000563184 DIRC1Q969H9 104 aa0.8□□□□□ -2.28
LINC00557-201ENST00000563184 PRELID3AQ96N28 172 aa0.8□□□□□ -2.28
LINC00557-201ENST00000563184 TMEM138Q9NPI0 162 aa0.8□□□□□ -2.28
LINC00557-201ENST00000563184 TRAPPC2LQ9UL33 140 aa0.8□□□□□ -2.28
LINC00557-201ENST00000563184 COL24A1Q17RW2 1714 aa0.8□□□□□ -2.28
LINC00557-201ENST00000563184 MED23Q9ULK4 1368 aa0.8□□□□□ -2.28
LINC00557-201ENST00000563184 N4BP2Q86UW6 1770 aaPredicted RBP0.8□□□□□ -2.28
LINC00557-201ENST00000563184 A2MP01023 1474 aa0.8□□□□□ -2.28
LINC00557-201ENST00000563184 FANCD2Q9BXW9 1451 aa0.8□□□□□ -2.28
LINC00557-201ENST00000563184 KDM6BO15054 1643 aa0.79□□□□□ -2.28
LINC00557-201ENST00000563184 ZGRF1Q86YA3 2104 aa0.79□□□□□ -2.28
LINC00557-201ENST00000563184 C5orf58C9J3I9 102 aa0.79□□□□□ -2.28
LINC00557-201ENST00000563184 C9JAW5 83 aa0.79□□□□□ -2.28
LINC00557-201ENST00000563184 UQCRQO14949 82 aa0.79□□□□□ -2.28
LINC00557-201ENST00000563184 YPEL1O60688 119 aa0.79□□□□□ -2.28
LINC00557-201ENST00000563184 SMIM24O75264 130 aa0.79□□□□□ -2.28
LINC00557-201ENST00000563184 TNFSF15O95150 251 aa0.79□□□□□ -2.28
LINC00557-201ENST00000563184 MT-ND6P03923 174 aa0.79□□□□□ -2.28
LINC00557-201ENST00000563184 PAEPP09466 180 aa0.79□□□□□ -2.28
LINC00557-201ENST00000563184 SAA1P0DJI8 122 aaPredicted RBP0.79□□□□□ -2.28
LINC00557-201ENST00000563184 MPC1LP0DKB6 136 aa0.79□□□□□ -2.28
LINC00557-201ENST00000563184 SDC4P31431 198 aa0.79□□□□□ -2.28
LINC00557-201ENST00000563184 CKS1BP61024 79 aa0.79□□□□□ -2.28
LINC00557-201ENST00000563184 PSPHP78330 225 aa0.79□□□□□ -2.28
LINC00557-201ENST00000563184 OR8B8Q15620 311 aa0.79□□□□□ -2.28
LINC00557-201ENST00000563184 VMA21Q3ZAQ7 101 aa0.79□□□□□ -2.28
LINC00557-201ENST00000563184 GLIPR1L1Q6UWM5 242 aa0.79□□□□□ -2.28
LINC00557-201ENST00000563184 OR5H6Q8NGV6 325 aa0.79□□□□□ -2.28
LINC00557-201ENST00000563184 NAT14Q8WUY8 206 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms