RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 MED13LQ71F56 2210 aa9.67□□□□□ -0.86
AC055717.2-201ENST00000561864 UNC79Q9P2D8 2635 aa9.66□□□□□ -0.86
AC055717.2-201ENST00000561864 PRRC2AP48634 2157 aaKnown RBP9.66□□□□□ -0.86
AC055717.2-201ENST00000561864 PRAC2D3DTV9 90 aa9.66□□□□□ -0.86
AC055717.2-201ENST00000561864 NUPR1O60356 82 aa9.66□□□□□ -0.86
AC055717.2-201ENST00000561864 ELANEP08246 267 aa9.66□□□□□ -0.86
AC055717.2-201ENST00000561864 ZNF138P52744 262 aa9.66□□□□□ -0.86
AC055717.2-201ENST00000561864 FAM106AQ4KMX7 169 aa9.66□□□□□ -0.86
AC055717.2-201ENST00000561864 TMEM78Q5T7P6 136 aa9.66□□□□□ -0.86
AC055717.2-201ENST00000561864 C9orf47Q6ZRZ4 202 aa9.66□□□□□ -0.86
AC055717.2-201ENST00000561864 GPHB5Q86YW7 130 aa9.66□□□□□ -0.86
AC055717.2-201ENST00000561864 C18orf32Q8TCD1 76 aa9.66□□□□□ -0.86
AC055717.2-201ENST00000561864 ASCL2Q99929 193 aa9.66□□□□□ -0.86
AC055717.2-201ENST00000561864 ALKBH7Q9BT30 221 aaPredicted RBP9.66□□□□□ -0.86
AC055717.2-201ENST00000561864 DAZ1Q9NQZ3 744 aaKnown RBP9.66□□□□□ -0.86
AC055717.2-201ENST00000561864 UFC1Q9Y3C8 167 aa9.66□□□□□ -0.86
AC055717.2-201ENST00000561864 CELSR2Q9HCU4 2923 aa9.66□□□□□ -0.86
AC055717.2-201ENST00000561864 CENPEQ02224 2701 aa9.65□□□□□ -0.86
AC055717.2-201ENST00000561864 F2Z2F3 143 aa9.65□□□□□ -0.86
AC055717.2-201ENST00000561864 SMAD7O15105 426 aaKnown RBP9.65□□□□□ -0.86
AC055717.2-201ENST00000561864 HOXA3O43365 443 aaPredicted RBP9.65□□□□□ -0.86
AC055717.2-201ENST00000561864 TMEM86BQ8N661 226 aa9.65□□□□□ -0.86
AC055717.2-201ENST00000561864 MYOZ3Q8TDC0 251 aa9.65□□□□□ -0.86
AC055717.2-201ENST00000561864 LENEPQ9Y5L5 61 aa9.65□□□□□ -0.86
AC055717.2-201ENST00000561864 NBPF19A0A087WUL8 3843 aa9.65□□□□□ -0.87
AC055717.2-201ENST00000561864 CRYBG3Q68DQ2 2970 aa9.64□□□□□ -0.87
AC055717.2-201ENST00000561864 FBN2P35556 2912 aa9.64□□□□□ -0.87
AC055717.2-201ENST00000561864 LOC102724200A0A096LPH7 203 aaPredicted RBP9.64□□□□□ -0.87
AC055717.2-201ENST00000561864 CYSRT1A8MQ03 144 aa9.64□□□□□ -0.87
AC055717.2-201ENST00000561864 FABP5P3A8MUU1 101 aa9.64□□□□□ -0.87
AC055717.2-201ENST00000561864 SOCS3O14543 225 aa9.64□□□□□ -0.87
AC055717.2-201ENST00000561864 OVOL1O14753 267 aa9.64□□□□□ -0.87
AC055717.2-201ENST00000561864 CTRLP40313 264 aa9.64□□□□□ -0.87
AC055717.2-201ENST00000561864 HIST1H1AQ02539 215 aaPredicted RBP9.64□□□□□ -0.87
AC055717.2-201ENST00000561864 ERCC8Q13216 396 aa9.64□□□□□ -0.87
AC055717.2-201ENST00000561864 IQCJQ1A5X6 159 aa9.64□□□□□ -0.87
AC055717.2-201ENST00000561864 DMRTA1Q5VZB9 504 aa9.64□□□□□ -0.87
AC055717.2-201ENST00000561864 LCNL1Q6ZST4 164 aa9.64□□□□□ -0.87
AC055717.2-201ENST00000561864 Q8N2B8 174 aa9.64□□□□□ -0.87
AC055717.2-201ENST00000561864 RNF152Q8N8N0 203 aa9.64□□□□□ -0.87
AC055717.2-201ENST00000561864 SSBP4Q9BWG4 385 aaPredicted RBP9.64□□□□□ -0.87
AC055717.2-201ENST00000561864 SAMD10Q9BYL1 202 aa9.64□□□□□ -0.87
AC055717.2-201ENST00000561864 AGPAT4-IT1Q9H0P7 198 aa9.64□□□□□ -0.87
AC055717.2-201ENST00000561864 SMPXQ9UHP9 88 aa9.64□□□□□ -0.87
AC055717.2-201ENST00000561864 ABCA1O95477 2261 aa9.64□□□□□ -0.87
AC055717.2-201ENST00000561864 LGALS1P09382 135 aaKnown RBP9.63□□□□□ -0.87
AC055717.2-201ENST00000561864 ARMS2P0C7Q2 107 aa9.63□□□□□ -0.87
AC055717.2-201ENST00000561864 PRB4P10163 310 aaPredicted RBP9.63□□□□□ -0.87
AC055717.2-201ENST00000561864 ZNF80P51504 273 aaPredicted RBP9.63□□□□□ -0.87
AC055717.2-201ENST00000561864 LINC01559Q495D7 138 aa9.63□□□□□ -0.87
AC055717.2-201ENST00000561864 IL17RELQ6ZVW7 336 aa9.63□□□□□ -0.87
AC055717.2-201ENST00000561864 REC114Q7Z4M0 266 aa9.63□□□□□ -0.87
AC055717.2-201ENST00000561864 SIGLECL1Q8N7X8 197 aa9.63□□□□□ -0.87
AC055717.2-201ENST00000561864 ZNF738Q8NE65 137 aa9.63□□□□□ -0.87
AC055717.2-201ENST00000561864 RHPN1-AS1Q9BWJ2 59 aa9.63□□□□□ -0.87
AC055717.2-201ENST00000561864 NRN1Q9NPD7 142 aa9.63□□□□□ -0.87
AC055717.2-201ENST00000561864 ANKRD17O75179 2603 aaKnown RBP9.62□□□□□ -0.87
AC055717.2-201ENST00000561864 ZNF324O75467 553 aaPredicted RBP9.62□□□□□ -0.87
AC055717.2-201ENST00000561864 GPX1P07203 203 aa9.62□□□□□ -0.87
AC055717.2-201ENST00000561864 IGLC6P0CF74 106 aa9.62□□□□□ -0.87
AC055717.2-201ENST00000561864 CDPF1Q6NVV7 123 aa9.62□□□□□ -0.87
AC055717.2-201ENST00000561864 ZNF493Q6ZR52 646 aa9.62□□□□□ -0.87
AC055717.2-201ENST00000561864 FER1L6-AS1Q8NA97 138 aa9.62□□□□□ -0.87
AC055717.2-201ENST00000561864 RCHY1Q96PM5 261 aa9.62□□□□□ -0.87
AC055717.2-201ENST00000561864 TMSB15BA0A087X1C1 80 aa9.61□□□□□ -0.87
AC055717.2-201ENST00000561864 RPLP1P05386 114 aaKnown RBP9.61□□□□□ -0.87
AC055717.2-201ENST00000561864 AMTP48728 403 aa9.61□□□□□ -0.87
AC055717.2-201ENST00000561864 TM4SF20Q53R12 229 aa9.61□□□□□ -0.87
AC055717.2-201ENST00000561864 LYZL1Q6UWQ5 148 aa9.61□□□□□ -0.87
AC055717.2-201ENST00000561864 WFDC11Q8NEX6 87 aa9.61□□□□□ -0.87
AC055717.2-201ENST00000561864 OR10J6PQ8NGY7 276 aa9.61□□□□□ -0.87
AC055717.2-201ENST00000561864 C20orf173Q96LM9 149 aa9.61□□□□□ -0.87
AC055717.2-201ENST00000561864 UBE2E2Q96LR5 201 aa9.61□□□□□ -0.87
AC055717.2-201ENST00000561864 LINC00477Q96M19 166 aa9.61□□□□□ -0.87
AC055717.2-201ENST00000561864 SETXQ7Z333 2677 aaKnown RBP9.61□□□□□ -0.87
AC055717.2-201ENST00000561864 ABCA12Q86UK0 2595 aa9.6□□□□□ -0.87
AC055717.2-201ENST00000561864 TRBV7-9A0A0J9YWB2 115 aa9.6□□□□□ -0.87
AC055717.2-201ENST00000561864 LGALS9O00182 355 aa9.6□□□□□ -0.87
AC055717.2-201ENST00000561864 ORM1P02763 201 aa9.6□□□□□ -0.87
AC055717.2-201ENST00000561864 PKIAP61925 76 aa9.6□□□□□ -0.87
AC055717.2-201ENST00000561864 Q6ZWC4 215 aa9.6□□□□□ -0.87
AC055717.2-201ENST00000561864 CHCHD1Q96BP2 118 aaKnown RBP9.6□□□□□ -0.87
AC055717.2-201ENST00000561864 FOXC2Q99958 501 aa9.6□□□□□ -0.87
AC055717.2-201ENST00000561864 TPPP3Q9BW30 176 aa9.6□□□□□ -0.87
AC055717.2-201ENST00000561864 NAGKQ9UJ70 344 aa9.6□□□□□ -0.87
AC055717.2-201ENST00000561864 APCP25054 2843 aa9.59□□□□□ -0.87
AC055717.2-201ENST00000561864 TSTD3H0UI37 97 aa9.59□□□□□ -0.87
AC055717.2-201ENST00000561864 HSBP1O75506 76 aa9.59□□□□□ -0.87
AC055717.2-201ENST00000561864 PMCHP20382 165 aa9.59□□□□□ -0.87
AC055717.2-201ENST00000561864 ID1P41134 155 aa9.59□□□□□ -0.87
AC055717.2-201ENST00000561864 C10orf99Q6UWK7 81 aa9.59□□□□□ -0.87
AC055717.2-201ENST00000561864 CNFNQ9BYD5 112 aa9.59□□□□□ -0.87
AC055717.2-201ENST00000561864 TMEM213A2RRL7 107 aa9.58□□□□□ -0.88
AC055717.2-201ENST00000561864 SCGB1D1O95968 90 aa9.58□□□□□ -0.88
AC055717.2-201ENST00000561864 RPL11P62913 178 aaKnown RBP9.58□□□□□ -0.88
AC055717.2-201ENST00000561864 RNASEKQ6P5S7 137 aaKnown RBP9.58□□□□□ -0.88
AC055717.2-201ENST00000561864 SPG11Q96JI7 2443 aa9.57□□□□□ -0.88
AC055717.2-201ENST00000561864 ITPR2Q14571 2701 aa9.57□□□□□ -0.88
AC055717.2-201ENST00000561864 POLQO75417 2590 aa9.57□□□□□ -0.88
AC055717.2-201ENST00000561864 CD5LO43866 347 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms