RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 XAF1Q6GPH4 301 aa-0.22□□□□□ -2.44
USP8-218ENST00000561330 PHF5AQ7RTV0 110 aaKnown RBP-0.22□□□□□ -2.44
USP8-218ENST00000561330 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.22□□□□□ -2.44
USP8-218ENST00000561330 LINC00208Q96KT6 92 aa-0.22□□□□□ -2.44
USP8-218ENST00000561330 PAIP2Q9BPZ3 127 aaKnown RBP-0.22□□□□□ -2.44
USP8-218ENST00000561330 PIK3C2AO00443 1686 aa-0.22□□□□□ -2.44
USP8-218ENST00000561330 CELSR2Q9HCU4 2923 aa-0.22□□□□□ -2.45
USP8-218ENST00000561330 POLQO75417 2590 aa-0.22□□□□□ -2.45
USP8-218ENST00000561330 TANC1Q9C0D5 1861 aa-0.22□□□□□ -2.45
USP8-218ENST00000561330 MYH3P11055 1940 aa-0.23□□□□□ -2.45
USP8-218ENST00000561330 LOC107984156A0A0G2JMH3 177 aa-0.23□□□□□ -2.45
USP8-218ENST00000561330 IGHV3-30P01768 117 aa-0.23□□□□□ -2.45
USP8-218ENST00000561330 MT-ND6P03923 174 aa-0.23□□□□□ -2.45
USP8-218ENST00000561330 IGHV3-30-5P0DP03 117 aa-0.23□□□□□ -2.45
USP8-218ENST00000561330 EVI2AP22794 236 aa-0.23□□□□□ -2.45
USP8-218ENST00000561330 ZCCHC23Q6ZST2 131 aa-0.23□□□□□ -2.45
USP8-218ENST00000561330 VMO1Q7Z5L0 202 aa-0.23□□□□□ -2.45
USP8-218ENST00000561330 ARL17AQ8IVW1 177 aa-0.23□□□□□ -2.45
USP8-218ENST00000561330 LINC00269Q8N2A0 174 aa-0.23□□□□□ -2.45
USP8-218ENST00000561330 GRPEL2Q8TAA5 225 aa-0.23□□□□□ -2.45
USP8-218ENST00000561330 FAM208BQ5VWN6 2430 aa-0.23□□□□□ -2.45
USP8-218ENST00000561330 DOPEY2Q9Y3R5 2298 aa-0.24□□□□□ -2.45
USP8-218ENST00000561330 CTTNBP2Q8WZ74 1663 aa-0.24□□□□□ -2.45
USP8-218ENST00000561330 JMJD1CQ15652 2540 aa-0.24□□□□□ -2.45
USP8-218ENST00000561330 PIAS1O75925 651 aa-0.24□□□□□ -2.45
USP8-218ENST00000561330 ATP5HO75947 161 aa-0.24□□□□□ -2.45
USP8-218ENST00000561330 IFITM1P13164 125 aa-0.24□□□□□ -2.45
USP8-218ENST00000561330 SNCBQ16143 134 aa-0.24□□□□□ -2.45
USP8-218ENST00000561330 HACD4Q5VWC8 232 aa-0.24□□□□□ -2.45
USP8-218ENST00000561330 C3orf62Q6ZUJ4 267 aa-0.24□□□□□ -2.45
USP8-218ENST00000561330 EFCAB11Q9BUY7 163 aa-0.24□□□□□ -2.45
USP8-218ENST00000561330 LYRM2Q9NU23 88 aaPredicted RBP-0.24□□□□□ -2.45
USP8-218ENST00000561330 SSR3Q9UNL2 185 aa-0.24□□□□□ -2.45
USP8-218ENST00000561330 TPRKBQ9Y3C4 175 aa-0.24□□□□□ -2.45
USP8-218ENST00000561330 DSPPQ9NZW4 1301 aa-0.24□□□□□ -2.45
USP8-218ENST00000561330 FLNCQ14315 2725 aa-0.24□□□□□ -2.45
USP8-218ENST00000561330 KIAA1549LQ6ZVL6 1849 aa-0.24□□□□□ -2.45
USP8-218ENST00000561330 DOCK11Q5JSL3 2073 aa-0.25□□□□□ -2.45
USP8-218ENST00000561330 F5P12259 2224 aa-0.25□□□□□ -2.45
USP8-218ENST00000561330 NCOR1O75376 2440 aa-0.25□□□□□ -2.45
USP8-218ENST00000561330 C3orf85A0A1B0GTC6 90 aa-0.25□□□□□ -2.45
USP8-218ENST00000561330 C5orf58C9J3I9 102 aa-0.25□□□□□ -2.45
USP8-218ENST00000561330 GYPBP06028 91 aa-0.25□□□□□ -2.45
USP8-218ENST00000561330 PHBP35232 272 aa-0.25□□□□□ -2.45
USP8-218ENST00000561330 HBBP68871 147 aa-0.25□□□□□ -2.45
USP8-218ENST00000561330 FXYD3Q14802 87 aa-0.25□□□□□ -2.45
USP8-218ENST00000561330 AKR1C8PQ5T2L2 129 aa-0.25□□□□□ -2.45
USP8-218ENST00000561330 C1orf140Q5VVS0 124 aa-0.25□□□□□ -2.45
USP8-218ENST00000561330 CROCCP2Q86T23 111 aa-0.25□□□□□ -2.45
USP8-218ENST00000561330 OR4C12Q96R67 309 aa-0.25□□□□□ -2.45
USP8-218ENST00000561330 SH3BGRL3Q9H299 93 aa-0.25□□□□□ -2.45
USP8-218ENST00000561330 MYH1P12882 1939 aa-0.25□□□□□ -2.45
USP8-218ENST00000561330 NSD1Q96L73 2696 aaPredicted RBP-0.26□□□□□ -2.45
USP8-218ENST00000561330 HELZP42694 1942 aaKnown RBP-0.26□□□□□ -2.45
USP8-218ENST00000561330 KIAA1107Q9UPP5 1409 aa-0.26□□□□□ -2.45
USP8-218ENST00000561330 RTL9Q8NET4 1388 aa-0.26□□□□□ -2.45
USP8-218ENST00000561330 LOC101927531A0A1B0GV80 90 aa-0.26□□□□□ -2.45
USP8-218ENST00000561330 BBIP1A8MTZ0 92 aa-0.26□□□□□ -2.45
USP8-218ENST00000561330 ATG12O94817 140 aa-0.26□□□□□ -2.45
USP8-218ENST00000561330 HSD11B1P28845 292 aa-0.26□□□□□ -2.45
USP8-218ENST00000561330 PPP1R2P41236 205 aa-0.26□□□□□ -2.45
USP8-218ENST00000561330 FKBP1CQ5VVH2 108 aa-0.26□□□□□ -2.45
USP8-218ENST00000561330 CSAG1Q6PB30 78 aa-0.26□□□□□ -2.45
USP8-218ENST00000561330 DHRS4L2Q6PKH6 230 aa-0.26□□□□□ -2.45
USP8-218ENST00000561330 C5orf56Q8N8D9 126 aa-0.26□□□□□ -2.45
USP8-218ENST00000561330 OR5AK2Q8NH90 309 aa-0.26□□□□□ -2.45
USP8-218ENST00000561330 NEK7Q8TDX7 302 aa-0.26□□□□□ -2.45
USP8-218ENST00000561330 PBDC1Q9BVG4 233 aa-0.26□□□□□ -2.45
USP8-218ENST00000561330 OR2H1Q9GZK4 316 aa-0.26□□□□□ -2.45
USP8-218ENST00000561330 ANKRD31Q8N7Z5 1873 aa-0.27□□□□□ -2.45
USP8-218ENST00000561330 NUP210Q8TEM1 1887 aaPredicted RBP-0.27□□□□□ -2.45
USP8-218ENST00000561330 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.27□□□□□ -2.45
USP8-218ENST00000561330 A0A1W2PPB8 328 aa-0.27□□□□□ -2.45
USP8-218ENST00000561330 KIR3DP1A8MWS1 328 aa-0.27□□□□□ -2.45
USP8-218ENST00000561330 C10orf142B7Z368 130 aa-0.27□□□□□ -2.45
USP8-218ENST00000561330 CST7O76096 145 aa-0.27□□□□□ -2.45
USP8-218ENST00000561330 FABP4P15090 132 aa-0.27□□□□□ -2.45
USP8-218ENST00000561330 RPL35P42766 123 aaKnown RBP-0.27□□□□□ -2.45
USP8-218ENST00000561330 POU6F1Q14863 301 aa-0.27□□□□□ -2.45
USP8-218ENST00000561330 TMED2Q15363 201 aa-0.27□□□□□ -2.45
USP8-218ENST00000561330 KRTAP6-1Q3LI64 71 aa-0.27□□□□□ -2.45
USP8-218ENST00000561330 NUP35Q8NFH5 326 aa-0.27□□□□□ -2.45
USP8-218ENST00000561330 RTL8AQ9BWD3 113 aa-0.27□□□□□ -2.45
USP8-218ENST00000561330 BIN3Q9NQY0 253 aa-0.27□□□□□ -2.45
USP8-218ENST00000561330 MAP2P11137 1827 aaKnown RBP-0.27□□□□□ -2.45
USP8-218ENST00000561330 PTPRQQ9UMZ3 2332 aa-0.28□□□□□ -2.45
USP8-218ENST00000561330 NBDYA0A0U1RRE5 68 aa-0.28□□□□□ -2.45
USP8-218ENST00000561330 ARL5CA6NH57 179 aa-0.28□□□□□ -2.45
USP8-218ENST00000561330 TMEM210A6NLX4 147 aa-0.28□□□□□ -2.45
USP8-218ENST00000561330 TRACP01848 142 aa-0.28□□□□□ -2.45
USP8-218ENST00000561330 CAPZBP47756 277 aa-0.28□□□□□ -2.45
USP8-218ENST00000561330 MRPS25P82663 173 aaKnown RBP-0.28□□□□□ -2.45
USP8-218ENST00000561330 MRPS36P82909 103 aaKnown RBP-0.28□□□□□ -2.45
USP8-218ENST00000561330 COX6A2Q02221 97 aa-0.28□□□□□ -2.45
USP8-218ENST00000561330 TCTEX1D1Q8N7M0 179 aa-0.28□□□□□ -2.45
USP8-218ENST00000561330 TMEM229BQ8NBD8 167 aa-0.28□□□□□ -2.45
USP8-218ENST00000561330 CEP19Q96LK0 163 aa-0.28□□□□□ -2.45
USP8-218ENST00000561330 TMEM14BQ9NUH8 114 aa-0.28□□□□□ -2.45
USP8-218ENST00000561330 MRPL35Q9NZE8 188 aaKnown RBP-0.28□□□□□ -2.45
USP8-218ENST00000561330 MRPL36Q9P0J6 103 aaKnown RBP-0.28□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms