RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 LINC00479Q96M42 142 aa10.09□□□□□ -0.79
HMBOX1-213ENST00000560269 CLUHP3Q96NS8 147 aa10.09□□□□□ -0.79
HMBOX1-213ENST00000560269 CITED4Q96RK1 184 aa10.09□□□□□ -0.79
HMBOX1-213ENST00000560269 VGLL1Q99990 258 aa10.09□□□□□ -0.79
HMBOX1-213ENST00000560269 AGPAT4-IT1Q9H0P7 198 aa10.09□□□□□ -0.79
HMBOX1-213ENST00000560269 WFDC10AQ9H1F0 79 aa10.09□□□□□ -0.79
HMBOX1-213ENST00000560269 SLC35B3Q9H1N7 401 aa10.09□□□□□ -0.79
HMBOX1-213ENST00000560269 TREM1Q9NP99 234 aa10.09□□□□□ -0.79
HMBOX1-213ENST00000560269 PPP1R14DQ9NXH3 145 aa10.09□□□□□ -0.79
HMBOX1-213ENST00000560269 MGAM2Q2M2H8 2515 aa10.08□□□□□ -0.8
HMBOX1-213ENST00000560269 TRAV8-1A0A0A6YYK1 113 aa10.08□□□□□ -0.8
HMBOX1-213ENST00000560269 TRAV34A0A0B4J273 112 aa10.08□□□□□ -0.8
HMBOX1-213ENST00000560269 FLI1Q01543 452 aaPredicted RBP10.08□□□□□ -0.8
HMBOX1-213ENST00000560269 NDUFA5Q16718 116 aa10.08□□□□□ -0.8
HMBOX1-213ENST00000560269 TMEM78Q5T7P6 136 aa10.08□□□□□ -0.8
HMBOX1-213ENST00000560269 DEFB125Q8N687 156 aa10.08□□□□□ -0.8
HMBOX1-213ENST00000560269 DERL1Q9BUN8 251 aa10.08□□□□□ -0.8
HMBOX1-213ENST00000560269 PSG8Q9UQ74 426 aa10.08□□□□□ -0.8
HMBOX1-213ENST00000560269 NBEAL1Q6ZS30 2694 aa10.08□□□□□ -0.8
HMBOX1-213ENST00000560269 CT45A10P0DMU9 189 aa10.07□□□□□ -0.8
HMBOX1-213ENST00000560269 RPL35P42766 123 aaKnown RBP10.07□□□□□ -0.8
HMBOX1-213ENST00000560269 ZNF138P52744 262 aa10.07□□□□□ -0.8
HMBOX1-213ENST00000560269 TAS2R60P59551 318 aa10.07□□□□□ -0.8
HMBOX1-213ENST00000560269 UBE2G1P62253 170 aa10.07□□□□□ -0.8
HMBOX1-213ENST00000560269 TRPT1Q86TN4 253 aaKnown RBP10.07□□□□□ -0.8
HMBOX1-213ENST00000560269 STHQ8IWL8 128 aa10.07□□□□□ -0.8
HMBOX1-213ENST00000560269 FAM19A4Q96LR4 140 aa10.07□□□□□ -0.8
HMBOX1-213ENST00000560269 ODF3Q96PU9 254 aa10.07□□□□□ -0.8
HMBOX1-213ENST00000560269 PARLQ9H300 379 aa10.07□□□□□ -0.8
HMBOX1-213ENST00000560269 ZNF492Q9P255 531 aa10.07□□□□□ -0.8
HMBOX1-213ENST00000560269 TRBV7-9A0A0J9YWB2 115 aa10.06□□□□□ -0.8
HMBOX1-213ENST00000560269 AMTNQ6UX39 209 aa10.06□□□□□ -0.8
HMBOX1-213ENST00000560269 Q86TA4 180 aa10.06□□□□□ -0.8
HMBOX1-213ENST00000560269 OR4B1Q8NGF8 309 aa10.06□□□□□ -0.8
HMBOX1-213ENST00000560269 SGK494Q96LW2 274 aa10.06□□□□□ -0.8
HMBOX1-213ENST00000560269 IGF2BP2-AS1Q96M15 143 aa10.06□□□□□ -0.8
HMBOX1-213ENST00000560269 LENEPQ9Y5L5 61 aa10.06□□□□□ -0.8
HMBOX1-213ENST00000560269 AGRNO00468 2067 aa10.06□□□□□ -0.8
HMBOX1-213ENST00000560269 RBMY1BA6NDE4 496 aaKnown RBP10.05□□□□□ -0.8
HMBOX1-213ENST00000560269 RBMY1EA6NEQ0 496 aaKnown RBP10.05□□□□□ -0.8
HMBOX1-213ENST00000560269 LTAP01374 205 aa10.05□□□□□ -0.8
HMBOX1-213ENST00000560269 SFTA3P0C7M3 94 aa10.05□□□□□ -0.8
HMBOX1-213ENST00000560269 RBMY1DP0C7P1 496 aaKnown RBP10.05□□□□□ -0.8
HMBOX1-213ENST00000560269 CRISP2P16562 243 aa10.05□□□□□ -0.8
HMBOX1-213ENST00000560269 CEBPGP53567 150 aa10.05□□□□□ -0.8
HMBOX1-213ENST00000560269 PRNTQ86SH4 94 aa10.05□□□□□ -0.8
HMBOX1-213ENST00000560269 SLC7A5P1Q8MH63 180 aa10.05□□□□□ -0.8
HMBOX1-213ENST00000560269 Q8TAT8 98 aa10.05□□□□□ -0.8
HMBOX1-213ENST00000560269 TVP23CQ96ET8 276 aa10.05□□□□□ -0.8
HMBOX1-213ENST00000560269 SRD5A3Q9H8P0 318 aa10.05□□□□□ -0.8
HMBOX1-213ENST00000560269 ZFP30Q9Y2G7 519 aa10.05□□□□□ -0.8
HMBOX1-213ENST00000560269 NOTCH1P46531 2555 aa10.04□□□□□ -0.8
HMBOX1-213ENST00000560269 TRBV20OR9-2A0A075B6H5 130 aa10.04□□□□□ -0.8
HMBOX1-213ENST00000560269 TMEM218A2RU14 115 aa10.04□□□□□ -0.8
HMBOX1-213ENST00000560269 A8MZ25 164 aa10.04□□□□□ -0.8
HMBOX1-213ENST00000560269 C9JCJ5 164 aa10.04□□□□□ -0.8
HMBOX1-213ENST00000560269 IGHV4-30-4P0DP06 118 aa10.04□□□□□ -0.8
HMBOX1-213ENST00000560269 ZNF674Q2M3X9 581 aa10.04□□□□□ -0.8
HMBOX1-213ENST00000560269 FAM74A3Q4VXF1 159 aa10.04□□□□□ -0.8
HMBOX1-213ENST00000560269 SOHLH1Q5JUK2 328 aa10.04□□□□□ -0.8
HMBOX1-213ENST00000560269 SAPCD1Q5SSQ6 148 aa10.04□□□□□ -0.8
HMBOX1-213ENST00000560269 COX8CQ7Z4L0 72 aa10.04□□□□□ -0.8
HMBOX1-213ENST00000560269 ZNF727A8MUV8 499 aa10.03□□□□□ -0.8
HMBOX1-213ENST00000560269 IGKV3-20P01619 116 aa10.03□□□□□ -0.8
HMBOX1-213ENST00000560269 LEPP41159 167 aa10.03□□□□□ -0.8
HMBOX1-213ENST00000560269 CENPWQ5EE01 88 aa10.03□□□□□ -0.8
HMBOX1-213ENST00000560269 BAGE2Q86Y30 109 aa10.03□□□□□ -0.8
HMBOX1-213ENST00000560269 SMIM12Q96EX1 92 aa10.03□□□□□ -0.8
HMBOX1-213ENST00000560269 ASCL2Q99929 193 aa10.03□□□□□ -0.8
HMBOX1-213ENST00000560269 SMIM7Q9BQ49 75 aa10.03□□□□□ -0.8
HMBOX1-213ENST00000560269 NDFIP1Q9BT67 221 aa10.03□□□□□ -0.8
HMBOX1-213ENST00000560269 MLST8Q9BVC4 326 aa10.03□□□□□ -0.8
HMBOX1-213ENST00000560269 AURKAIP1Q9NWT8 199 aaPredicted RBP10.03□□□□□ -0.8
HMBOX1-213ENST00000560269 IGLV2-8P01709 118 aa10.02□□□□□ -0.81
HMBOX1-213ENST00000560269 TSPOP30536 169 aa10.02□□□□□ -0.81
HMBOX1-213ENST00000560269 GNG4P50150 75 aa10.02□□□□□ -0.81
HMBOX1-213ENST00000560269 MORN3Q6PF18 240 aaPredicted RBP10.02□□□□□ -0.81
HMBOX1-213ENST00000560269 LINC00322Q6ZN03 302 aaPredicted RBP10.02□□□□□ -0.81
HMBOX1-213ENST00000560269 TMEM183AQ8IXX5 376 aa10.02□□□□□ -0.81
HMBOX1-213ENST00000560269 ZFAND2AQ8N6M9 145 aa10.02□□□□□ -0.81
HMBOX1-213ENST00000560269 TUBA4BQ9H853 241 aa10.02□□□□□ -0.81
HMBOX1-213ENST00000560269 LY96Q9Y6Y9 160 aa10.02□□□□□ -0.81
HMBOX1-213ENST00000560269 LOC102724200A0A096LPH7 203 aaPredicted RBP10.01□□□□□ -0.81
HMBOX1-213ENST00000560269 KLLNB2CW77 178 aa10.01□□□□□ -0.81
HMBOX1-213ENST00000560269 M0R2Z0 102 aa10.01□□□□□ -0.81
HMBOX1-213ENST00000560269 AMBPP02760 352 aa10.01□□□□□ -0.81
HMBOX1-213ENST00000560269 RPL35AP18077 110 aaKnown RBP10.01□□□□□ -0.81
HMBOX1-213ENST00000560269 ADCYAP1P18509 176 aa10.01□□□□□ -0.81
HMBOX1-213ENST00000560269 CDKN1BP46527 198 aa10.01□□□□□ -0.81
HMBOX1-213ENST00000560269 NUTF2P61970 127 aaKnown RBP10.01□□□□□ -0.81
HMBOX1-213ENST00000560269 C8orf49Q96NF6 230 aa10.01□□□□□ -0.81
HMBOX1-213ENST00000560269 SEC11CQ9BY50 192 aa10.01□□□□□ -0.81
HMBOX1-213ENST00000560269 KIR2DL5BA0A0G2JN68 375 aa10□□□□□ -0.81
HMBOX1-213ENST00000560269 KIR2DL5BA0A0G2JPC4 375 aa10□□□□□ -0.81
HMBOX1-213ENST00000560269 PGPEP1LA6NFU8 196 aa10□□□□□ -0.81
HMBOX1-213ENST00000560269 K7EIL1 84 aa10□□□□□ -0.81
HMBOX1-213ENST00000560269 GIG44P09565 113 aaPredicted RBP10□□□□□ -0.81
HMBOX1-213ENST00000560269 SPINK13Q1W4C9 94 aa10□□□□□ -0.81
HMBOX1-213ENST00000560269 TMEM241Q24JQ0 296 aa10□□□□□ -0.81
HMBOX1-213ENST00000560269 SMUG1Q53HV7 270 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms