RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 AKAP14Q86UN6 197 aa11.4□□□□□ -0.58
RABGGTA-206ENST00000558649 TCTE3Q8IZS6 198 aa11.4□□□□□ -0.58
RABGGTA-206ENST00000558649 Q8TAT8 98 aa11.4□□□□□ -0.58
RABGGTA-206ENST00000558649 CMTM2Q8TAZ6 248 aa11.4□□□□□ -0.58
RABGGTA-206ENST00000558649 PHLDA1Q8WV24 401 aaPredicted RBP11.4□□□□□ -0.58
RABGGTA-206ENST00000558649 OTORQ9NRC9 128 aa11.4□□□□□ -0.58
RABGGTA-206ENST00000558649 TRAV12-3A0A0B4J271 114 aa11.39□□□□□ -0.59
RABGGTA-206ENST00000558649 TMEM189A5PLL7 270 aa11.39□□□□□ -0.59
RABGGTA-206ENST00000558649 ZNF726P1Q15940 193 aa11.39□□□□□ -0.59
RABGGTA-206ENST00000558649 FAM74A1Q5RGS3 127 aa11.39□□□□□ -0.59
RABGGTA-206ENST00000558649 C9orf47Q6ZRZ4 202 aa11.39□□□□□ -0.59
RABGGTA-206ENST00000558649 LINC00477Q96M19 166 aa11.39□□□□□ -0.59
RABGGTA-206ENST00000558649 ODF3Q96PU9 254 aa11.39□□□□□ -0.59
RABGGTA-206ENST00000558649 CTXND1A0A1B0GTU2 59 aa11.38□□□□□ -0.59
RABGGTA-206ENST00000558649 FGF8P55075 233 aaPredicted RBP11.38□□□□□ -0.59
RABGGTA-206ENST00000558649 GNG5P63218 68 aa11.38□□□□□ -0.59
RABGGTA-206ENST00000558649 CEMP1Q6PRD7 247 aaPredicted RBP11.38□□□□□ -0.59
RABGGTA-206ENST00000558649 TMEM256Q8N2U0 113 aa11.38□□□□□ -0.59
RABGGTA-206ENST00000558649 RXFP4Q8TDU9 374 aa11.38□□□□□ -0.59
RABGGTA-206ENST00000558649 YTHDF2Q9Y5A9 579 aaKnown RBP11.38□□□□□ -0.59
RABGGTA-206ENST00000558649 DIRC3C9JPN6 131 aa11.37□□□□□ -0.59
RABGGTA-206ENST00000558649 SLC25A5P05141 298 aaKnown RBP11.37□□□□□ -0.59
RABGGTA-206ENST00000558649 AZU1P20160 251 aa11.37□□□□□ -0.59
RABGGTA-206ENST00000558649 RNASE4P34096 147 aaKnown RBP11.37□□□□□ -0.59
RABGGTA-206ENST00000558649 BTN1A1Q13410 526 aa11.37□□□□□ -0.59
RABGGTA-206ENST00000558649 Q6ZTC4 211 aa11.37□□□□□ -0.59
RABGGTA-206ENST00000558649 NIPSNAP3BQ9BS92 247 aa11.37□□□□□ -0.59
RABGGTA-206ENST00000558649 TMEM167BQ9NRX6 74 aa11.37□□□□□ -0.59
RABGGTA-206ENST00000558649 CSMD3Q7Z407 3707 aa11.37□□□□□ -0.59
RABGGTA-206ENST00000558649 A0A1B0GVG6 124 aa11.36□□□□□ -0.59
RABGGTA-206ENST00000558649 C7orf71A4D174 169 aa11.36□□□□□ -0.59
RABGGTA-206ENST00000558649 H7BYZ3 331 aa11.36□□□□□ -0.59
RABGGTA-206ENST00000558649 C1QBP02746 253 aa11.36□□□□□ -0.59
RABGGTA-206ENST00000558649 GPX1P07203 203 aa11.36□□□□□ -0.59
RABGGTA-206ENST00000558649 SPART-AS1P0CW21 52 aa11.36□□□□□ -0.59
RABGGTA-206ENST00000558649 FHITP49789 147 aa11.36□□□□□ -0.59
RABGGTA-206ENST00000558649 ZNF138P52744 262 aa11.36□□□□□ -0.59
RABGGTA-206ENST00000558649 TAS2R60P59551 318 aa11.36□□□□□ -0.59
RABGGTA-206ENST00000558649 CD300CQ08708 224 aa11.36□□□□□ -0.59
RABGGTA-206ENST00000558649 FAM222AQ5U5X8 452 aa11.36□□□□□ -0.59
RABGGTA-206ENST00000558649 GOLT1AQ6ZVE7 132 aa11.36□□□□□ -0.59
RABGGTA-206ENST00000558649 TMPRSS5Q9H3S3 457 aa11.36□□□□□ -0.59
RABGGTA-206ENST00000558649 ZNF492Q9P255 531 aa11.36□□□□□ -0.59
RABGGTA-206ENST00000558649 KLK5Q9Y337 293 aaPredicted RBP11.36□□□□□ -0.59
RABGGTA-206ENST00000558649 RBAKDNA6NC62 111 aa11.35□□□□□ -0.59
RABGGTA-206ENST00000558649 MAP1LC3B2A6NCE7 125 aa11.35□□□□□ -0.59
RABGGTA-206ENST00000558649 UBE2G2P60604 165 aa11.35□□□□□ -0.59
RABGGTA-206ENST00000558649 EIF5AP63241 154 aaKnown RBP11.35□□□□□ -0.59
RABGGTA-206ENST00000558649 C12orf74Q32Q52 190 aa11.35□□□□□ -0.59
RABGGTA-206ENST00000558649 LGALSLQ3ZCW2 172 aaPredicted RBP11.35□□□□□ -0.59
RABGGTA-206ENST00000558649 PRR9Q5T870 116 aa11.35□□□□□ -0.59
RABGGTA-206ENST00000558649 FAM213BQ8TBF2 198 aa11.35□□□□□ -0.59
RABGGTA-206ENST00000558649 FAM19A4Q96LR4 140 aa11.35□□□□□ -0.59
RABGGTA-206ENST00000558649 C20orf144Q9BQM9 153 aa11.35□□□□□ -0.59
RABGGTA-206ENST00000558649 MAP1LC3BQ9GZQ8 125 aa11.35□□□□□ -0.59
RABGGTA-206ENST00000558649 PLA2G2EQ9NZK7 142 aa11.35□□□□□ -0.59
RABGGTA-206ENST00000558649 DKK2Q9UBU2 259 aa11.35□□□□□ -0.59
RABGGTA-206ENST00000558649 KLLNB2CW77 178 aa11.34□□□□□ -0.59
RABGGTA-206ENST00000558649 SEC11BP0C7V7 166 aa11.34□□□□□ -0.59
RABGGTA-206ENST00000558649 TPT1P13693 172 aaKnown RBP11.34□□□□□ -0.59
RABGGTA-206ENST00000558649 SUN5Q8TC36 379 aa11.34□□□□□ -0.59
RABGGTA-206ENST00000558649 TMED6Q8WW62 240 aa11.34□□□□□ -0.59
RABGGTA-206ENST00000558649 TRAV8-1A0A0A6YYK1 113 aa11.33□□□□□ -0.6
RABGGTA-206ENST00000558649 A0A1B0GV50 99 aa11.33□□□□□ -0.6
RABGGTA-206ENST00000558649 GGTLC3B5MD39 225 aa11.33□□□□□ -0.6
RABGGTA-206ENST00000558649 CRISP2P16562 243 aa11.33□□□□□ -0.6
RABGGTA-206ENST00000558649 SUMO1P63165 101 aaKnown RBP11.33□□□□□ -0.6
RABGGTA-206ENST00000558649 ZFAND2AQ8N6M9 145 aa11.33□□□□□ -0.6
RABGGTA-206ENST00000558649 C5orf17Q8NAS9 161 aa11.33□□□□□ -0.6
RABGGTA-206ENST00000558649 C16orf74Q96GX8 76 aa11.33□□□□□ -0.6
RABGGTA-206ENST00000558649 SGK494Q96LW2 274 aa11.33□□□□□ -0.6
RABGGTA-206ENST00000558649 STARD9Q9P2P6 4700 aa11.33□□□□□ -0.6
RABGGTA-206ENST00000558649 TRAV10A0A0B4J240 114 aa11.32□□□□□ -0.6
RABGGTA-206ENST00000558649 TEX48A0A1B0GUV7 120 aa11.32□□□□□ -0.6
RABGGTA-206ENST00000558649 C11orf94C9JXX5 98 aa11.32□□□□□ -0.6
RABGGTA-206ENST00000558649 DAD1P61803 113 aa11.32□□□□□ -0.6
RABGGTA-206ENST00000558649 CCDC28AQ8IWP9 274 aa11.32□□□□□ -0.6
RABGGTA-206ENST00000558649 C2CD4CQ8TF44 421 aa11.32□□□□□ -0.6
RABGGTA-206ENST00000558649 TMEM263Q8WUH6 116 aaKnown RBP11.32□□□□□ -0.6
RABGGTA-206ENST00000558649 PLAC8L1A1L4L8 177 aa11.31□□□□□ -0.6
RABGGTA-206ENST00000558649 IGLL5B9A064 214 aa11.31□□□□□ -0.6
RABGGTA-206ENST00000558649 UMAD1C9J7I0 102 aa11.31□□□□□ -0.6
RABGGTA-206ENST00000558649 TCRAP04437 139 aa11.31□□□□□ -0.6
RABGGTA-206ENST00000558649 HTN3P15516 51 aa11.31□□□□□ -0.6
RABGGTA-206ENST00000558649 ZFP69Q49AA0 526 aa11.31□□□□□ -0.6
RABGGTA-206ENST00000558649 Q6ZQT7 251 aa11.31□□□□□ -0.6
RABGGTA-206ENST00000558649 STOML3Q8TAV4 291 aa11.31□□□□□ -0.6
RABGGTA-206ENST00000558649 RNASE8Q8TDE3 154 aaKnown RBP11.31□□□□□ -0.6
RABGGTA-206ENST00000558649 PYGO2Q9BRQ0 406 aa11.31□□□□□ -0.6
RABGGTA-206ENST00000558649 DEFB131BA0A096LNP1 70 aa11.3□□□□□ -0.6
RABGGTA-206ENST00000558649 LCE6AA0A183 80 aa11.3□□□□□ -0.6
RABGGTA-206ENST00000558649 A0A1W2PRE2 83 aa11.3□□□□□ -0.6
RABGGTA-206ENST00000558649 F6UZH7 168 aa11.3□□□□□ -0.6
RABGGTA-206ENST00000558649 K7EQM0 130 aa11.3□□□□□ -0.6
RABGGTA-206ENST00000558649 RGS13O14921 159 aa11.3□□□□□ -0.6
RABGGTA-206ENST00000558649 ZNF324O75467 553 aaPredicted RBP11.3□□□□□ -0.6
RABGGTA-206ENST00000558649 IFNA7P01567 189 aa11.3□□□□□ -0.6
RABGGTA-206ENST00000558649 NMBP08949 121 aa11.3□□□□□ -0.6
RABGGTA-206ENST00000558649 DEFB130BP0DP73 79 aa11.3□□□□□ -0.6
RABGGTA-206ENST00000558649 DEFB130AP0DP74 79 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms