RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 TMPRSS5Q9H3S3 457 aa16.27■□□□□ 0.2
PABPN1-206ENST00000556809 DIRC3C9JPN6 131 aa16.26■□□□□ 0.19
PABPN1-206ENST00000556809 CRXO43186 299 aaPredicted RBP16.26■□□□□ 0.19
PABPN1-206ENST00000556809 INSP01308 110 aa16.26■□□□□ 0.19
PABPN1-206ENST00000556809 CDKN1BP46527 198 aa16.26■□□□□ 0.19
PABPN1-206ENST00000556809 ZNF705AQ6ZN79 300 aaPredicted RBP16.26■□□□□ 0.19
PABPN1-206ENST00000556809 C9orf47Q6ZRZ4 202 aa16.26■□□□□ 0.19
PABPN1-206ENST00000556809 LINC00477Q96M19 166 aa16.26■□□□□ 0.19
PABPN1-206ENST00000556809 AGPAT4-IT1Q9H0P7 198 aa16.26■□□□□ 0.19
PABPN1-206ENST00000556809 TRAV12-2A0A075B6T6 113 aa16.25■□□□□ 0.19
PABPN1-206ENST00000556809 LCE6AA0A183 80 aa16.25■□□□□ 0.19
PABPN1-206ENST00000556809 TSPOP30536 169 aa16.25■□□□□ 0.19
PABPN1-206ENST00000556809 RAB5CP51148 216 aa16.25■□□□□ 0.19
PABPN1-206ENST00000556809 TMEM78Q5T7P6 136 aa16.25■□□□□ 0.19
PABPN1-206ENST00000556809 ARL6IP6Q8N6S5 226 aa16.25■□□□□ 0.19
PABPN1-206ENST00000556809 MBD3L1Q8WWY6 194 aa16.25■□□□□ 0.19
PABPN1-206ENST00000556809 VGLL1Q99990 258 aa16.25■□□□□ 0.19
PABPN1-206ENST00000556809 GOLT1BQ9Y3E0 138 aa16.25■□□□□ 0.19
PABPN1-206ENST00000556809 PLECQ15149 4684 aaKnown RBP16.25■□□□□ 0.19
PABPN1-206ENST00000556809 IGHV3OR16-12A0A075B7B8 117 aa16.24■□□□□ 0.19
PABPN1-206ENST00000556809 RBAKDNA6NC62 111 aa16.24■□□□□ 0.19
PABPN1-206ENST00000556809 LEPP41159 167 aa16.24■□□□□ 0.19
PABPN1-206ENST00000556809 C1orf158Q8N1D5 194 aa16.24■□□□□ 0.19
PABPN1-206ENST00000556809 SFT2D1Q8WV19 159 aa16.24■□□□□ 0.19
PABPN1-206ENST00000556809 RPH3ALQ9UNE2 315 aa16.24■□□□□ 0.19
PABPN1-206ENST00000556809 A0A1W2PRE2 83 aa16.23■□□□□ 0.19
PABPN1-206ENST00000556809 GGTLC3B5MD39 225 aa16.23■□□□□ 0.19
PABPN1-206ENST00000556809 DEFB4AO15263 64 aa16.23■□□□□ 0.19
PABPN1-206ENST00000556809 SLC25A5P05141 298 aaKnown RBP16.23■□□□□ 0.19
PABPN1-206ENST00000556809 RBMY1A1P0DJD3 496 aaKnown RBP16.23■□□□□ 0.19
PABPN1-206ENST00000556809 RBMY1CP0DJD4 496 aa16.23■□□□□ 0.19
PABPN1-206ENST00000556809 MIFP14174 115 aa16.23■□□□□ 0.19
PABPN1-206ENST00000556809 SULT1A2P50226 295 aa16.23■□□□□ 0.19
PABPN1-206ENST00000556809 PMS2P11Q13670 270 aa16.23■□□□□ 0.19
PABPN1-206ENST00000556809 RBMY1FQ15415 496 aaKnown RBP16.23■□□□□ 0.19
PABPN1-206ENST00000556809 C5orf17Q8NAS9 161 aa16.23■□□□□ 0.19
PABPN1-206ENST00000556809 RYR2Q92736 4967 aa16.22■□□□□ 0.19
PABPN1-206ENST00000556809 IGHV4-28A0A0C4DH34 117 aa16.22■□□□□ 0.19
PABPN1-206ENST00000556809 CXorf65A6NEN9 183 aa16.22■□□□□ 0.19
PABPN1-206ENST00000556809 H2AFB1P0C5Y9 115 aa16.22■□□□□ 0.19
PABPN1-206ENST00000556809 UBE2G2P60604 165 aa16.22■□□□□ 0.19
PABPN1-206ENST00000556809 SUMO1P63165 101 aaKnown RBP16.22■□□□□ 0.19
PABPN1-206ENST00000556809 GNG5P63218 68 aa16.22■□□□□ 0.19
PABPN1-206ENST00000556809 FAM19A4Q96LR4 140 aa16.22■□□□□ 0.19
PABPN1-206ENST00000556809 NEU1Q99519 415 aa16.22■□□□□ 0.19
PABPN1-206ENST00000556809 ZNF492Q9P255 531 aa16.22■□□□□ 0.19
PABPN1-206ENST00000556809 YTHDF2Q9Y5A9 579 aaKnown RBP16.22■□□□□ 0.19
PABPN1-206ENST00000556809 ZNF138P52744 262 aa16.21■□□□□ 0.19
PABPN1-206ENST00000556809 KIR3DS1Q14943 382 aa16.21■□□□□ 0.19
PABPN1-206ENST00000556809 GOLT1AQ6ZVE7 132 aa16.21■□□□□ 0.19
PABPN1-206ENST00000556809 TMEM208Q9BTX3 173 aa16.21■□□□□ 0.19
PABPN1-206ENST00000556809 BOLA1Q9Y3E2 137 aa16.21■□□□□ 0.19
PABPN1-206ENST00000556809 DNAH1Q9P2D7 4330 aa16.21■□□□□ 0.18
PABPN1-206ENST00000556809 A0A1B0GV50 99 aa16.2■□□□□ 0.18
PABPN1-206ENST00000556809 FAM74A7A6NL05 159 aa16.2■□□□□ 0.18
PABPN1-206ENST00000556809 J3KRW8 73 aa16.2■□□□□ 0.18
PABPN1-206ENST00000556809 GFI1BQ5VTD9 330 aa16.2■□□□□ 0.18
PABPN1-206ENST00000556809 CEMP1Q6PRD7 247 aaPredicted RBP16.2■□□□□ 0.18
PABPN1-206ENST00000556809 Q8TAT8 98 aa16.2■□□□□ 0.18
PABPN1-206ENST00000556809 C11orf45Q8TAV5 145 aa16.2■□□□□ 0.18
PABPN1-206ENST00000556809 NUPR2A6NF83 97 aa16.19■□□□□ 0.18
PABPN1-206ENST00000556809 SMIM9A6NGZ8 99 aa16.19■□□□□ 0.18
PABPN1-206ENST00000556809 TCRAP04437 139 aa16.19■□□□□ 0.18
PABPN1-206ENST00000556809 CRISP2P16562 243 aa16.19■□□□□ 0.18
PABPN1-206ENST00000556809 NANOS2P60321 138 aaKnown RBP16.19■□□□□ 0.18
PABPN1-206ENST00000556809 NKX6-2Q9C056 277 aaPredicted RBP16.19■□□□□ 0.18
PABPN1-206ENST00000556809 EPDR1Q9UM22 224 aa16.19■□□□□ 0.18
PABPN1-206ENST00000556809 SERTM2A0A1B0GWG4 89 aa16.18■□□□□ 0.18
PABPN1-206ENST00000556809 TMEM256Q8N2U0 113 aa16.18■□□□□ 0.18
PABPN1-206ENST00000556809 C20orf144Q9BQM9 153 aa16.18■□□□□ 0.18
PABPN1-206ENST00000556809 TRBV7-9A0A0J9YWB2 115 aa16.17■□□□□ 0.18
PABPN1-206ENST00000556809 KLLNB2CW77 178 aa16.17■□□□□ 0.18
PABPN1-206ENST00000556809 HBE1P02100 147 aa16.17■□□□□ 0.18
PABPN1-206ENST00000556809 NMBP08949 121 aa16.17■□□□□ 0.18
PABPN1-206ENST00000556809 PHLDA1Q8WV24 401 aaPredicted RBP16.17■□□□□ 0.18
PABPN1-206ENST00000556809 ARL2-SNX15V9GYD0 113 aa16.17■□□□□ 0.18
PABPN1-206ENST00000556809 ALMS1Q8TCU4 4167 aa16.17■□□□□ 0.18
PABPN1-206ENST00000556809 TRAV1-1A0A0B4J248 108 aa16.16■□□□□ 0.18
PABPN1-206ENST00000556809 K7EQM0 130 aa16.16■□□□□ 0.18
PABPN1-206ENST00000556809 IFNA7P01567 189 aa16.16■□□□□ 0.18
PABPN1-206ENST00000556809 ALKAL2Q6UX46 152 aa16.16■□□□□ 0.18
PABPN1-206ENST00000556809 ZFAND2AQ8N6M9 145 aa16.16■□□□□ 0.18
PABPN1-206ENST00000556809 LINC01587Q99440 93 aa16.16■□□□□ 0.18
PABPN1-206ENST00000556809 ATG101Q9BSB4 218 aa16.16■□□□□ 0.18
PABPN1-206ENST00000556809 LENEPQ9Y5L5 61 aa16.16■□□□□ 0.18
PABPN1-206ENST00000556809 TRAV8-1A0A0A6YYK1 113 aa16.15■□□□□ 0.18
PABPN1-206ENST00000556809 TRAV12-3A0A0B4J271 114 aa16.15■□□□□ 0.18
PABPN1-206ENST00000556809 C7orf71A4D174 169 aa16.15■□□□□ 0.18
PABPN1-206ENST00000556809 GPX1P07203 203 aa16.15■□□□□ 0.18
PABPN1-206ENST00000556809 RRN3P1Q2M238 152 aa16.15■□□□□ 0.18
PABPN1-206ENST00000556809 CST9LP1Q5W188 147 aa16.15■□□□□ 0.18
PABPN1-206ENST00000556809 CYB561D1Q8N8Q1 229 aa16.15■□□□□ 0.18
PABPN1-206ENST00000556809 TEX46H3BTG2 121 aa16.14■□□□□ 0.17
PABPN1-206ENST00000556809 H7BYZ3 331 aa16.14■□□□□ 0.17
PABPN1-206ENST00000556809 PAGE4O60829 102 aa16.14■□□□□ 0.17
PABPN1-206ENST00000556809 PPT1P50897 306 aa16.14■□□□□ 0.17
PABPN1-206ENST00000556809 BTN1A1Q13410 526 aa16.14■□□□□ 0.17
PABPN1-206ENST00000556809 NIPSNAP3BQ9BS92 247 aa16.14■□□□□ 0.17
PABPN1-206ENST00000556809 LOC102723971A0A1B0GUV8 181 aa16.13■□□□□ 0.17
PABPN1-206ENST00000556809 ZNF705GA8MUZ8 300 aaPredicted RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms