RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 GIG44P09565 113 aaPredicted RBP12.76□□□□□ -0.37
TUBB3-211ENST00000556536 SGK494Q96LW2 274 aa12.76□□□□□ -0.37
TUBB3-211ENST00000556536 ATG101Q9BSB4 218 aa12.76□□□□□ -0.37
TUBB3-211ENST00000556536 VAX2Q9UIW0 290 aa12.76□□□□□ -0.37
TUBB3-211ENST00000556536 SCO2A0A1W2PP80 73 aa12.75□□□□□ -0.37
TUBB3-211ENST00000556536 MEF2BQ02080 365 aaPredicted RBP12.75□□□□□ -0.37
TUBB3-211ENST00000556536 CLLU1Q5K131 121 aa12.75□□□□□ -0.37
TUBB3-211ENST00000556536 CYB561D1Q8N8Q1 229 aa12.75□□□□□ -0.37
TUBB3-211ENST00000556536 Q8TAT8 98 aa12.75□□□□□ -0.37
TUBB3-211ENST00000556536 HIST1H2BAQ96A08 127 aa12.75□□□□□ -0.37
TUBB3-211ENST00000556536 LINC00477Q96M19 166 aa12.75□□□□□ -0.37
TUBB3-211ENST00000556536 FAM210AQ96ND0 272 aa12.75□□□□□ -0.37
TUBB3-211ENST00000556536 CSTL1Q9H114 145 aa12.75□□□□□ -0.37
TUBB3-211ENST00000556536 TRAV34A0A0B4J273 112 aa12.74□□□□□ -0.37
TUBB3-211ENST00000556536 KIR2DL5BA0A0G2JN68 375 aa12.74□□□□□ -0.37
TUBB3-211ENST00000556536 KIR2DL5BA0A0G2JPC4 375 aa12.74□□□□□ -0.37
TUBB3-211ENST00000556536 SERTM2A0A1B0GWG4 89 aa12.74□□□□□ -0.37
TUBB3-211ENST00000556536 M0R2Z0 102 aa12.74□□□□□ -0.37
TUBB3-211ENST00000556536 RGS13O14921 159 aa12.74□□□□□ -0.37
TUBB3-211ENST00000556536 IGLV2-11P01706 119 aa12.74□□□□□ -0.37
TUBB3-211ENST00000556536 ZNF138P52744 262 aa12.74□□□□□ -0.37
TUBB3-211ENST00000556536 SPINK13Q1W4C9 94 aa12.74□□□□□ -0.37
TUBB3-211ENST00000556536 TOR2AQ5JU69 321 aa12.74□□□□□ -0.37
TUBB3-211ENST00000556536 ZNF506Q5JVG8 444 aa12.74□□□□□ -0.37
TUBB3-211ENST00000556536 TMEM78Q5T7P6 136 aa12.74□□□□□ -0.37
TUBB3-211ENST00000556536 MORN3Q6PF18 240 aaPredicted RBP12.74□□□□□ -0.37
TUBB3-211ENST00000556536 KIR2DL5AQ8N109 375 aa12.74□□□□□ -0.37
TUBB3-211ENST00000556536 KIR2DL5BQ8NHK3 375 aa12.74□□□□□ -0.37
TUBB3-211ENST00000556536 FAM19A4Q96LR4 140 aa12.74□□□□□ -0.37
TUBB3-211ENST00000556536 TCEAL7Q9BRU2 100 aa12.74□□□□□ -0.37
TUBB3-211ENST00000556536 PPP1R14DQ9NXH3 145 aa12.74□□□□□ -0.37
TUBB3-211ENST00000556536 DNAH9Q9NYC9 4486 aa12.73□□□□□ -0.37
TUBB3-211ENST00000556536 CA1P00915 261 aaPredicted RBP12.73□□□□□ -0.37
TUBB3-211ENST00000556536 TAGLN2P37802 199 aaKnown RBP12.73□□□□□ -0.37
TUBB3-211ENST00000556536 APOC4P55056 127 aa12.73□□□□□ -0.37
TUBB3-211ENST00000556536 SBSPONQ8IVN8 264 aa12.73□□□□□ -0.37
TUBB3-211ENST00000556536 TXNDC17Q9BRA2 123 aa12.73□□□□□ -0.37
TUBB3-211ENST00000556536 ZNF492Q9P255 531 aa12.73□□□□□ -0.37
TUBB3-211ENST00000556536 AGRNO00468 2067 aa12.73□□□□□ -0.37
TUBB3-211ENST00000556536 F6UZH7 168 aa12.72□□□□□ -0.37
TUBB3-211ENST00000556536 K7EQM0 130 aa12.72□□□□□ -0.37
TUBB3-211ENST00000556536 KIR3DS1Q14943 382 aa12.72□□□□□ -0.37
TUBB3-211ENST00000556536 TMEM75Q8N9X5 138 aa12.72□□□□□ -0.37
TUBB3-211ENST00000556536 C2CD4CQ8TF44 421 aa12.72□□□□□ -0.37
TUBB3-211ENST00000556536 TVP23CQ96ET8 276 aa12.72□□□□□ -0.37
TUBB3-211ENST00000556536 ODF3Q96PU9 254 aa12.72□□□□□ -0.37
TUBB3-211ENST00000556536 EIF5A2Q9GZV4 153 aaKnown RBP12.72□□□□□ -0.37
TUBB3-211ENST00000556536 XCL2Q9UBD3 114 aa12.72□□□□□ -0.37
TUBB3-211ENST00000556536 PSG8Q9UQ74 426 aa12.72□□□□□ -0.37
TUBB3-211ENST00000556536 TRAV12-2A0A075B6T6 113 aa12.71□□□□□ -0.37
TUBB3-211ENST00000556536 AKR1C3P42330 323 aa12.71□□□□□ -0.37
TUBB3-211ENST00000556536 NUTF2P61970 127 aaKnown RBP12.71□□□□□ -0.37
TUBB3-211ENST00000556536 FLI1Q01543 452 aaPredicted RBP12.71□□□□□ -0.37
TUBB3-211ENST00000556536 C11orf52Q96A22 123 aa12.71□□□□□ -0.37
TUBB3-211ENST00000556536 KLF12Q9Y4X4 402 aa12.71□□□□□ -0.37
TUBB3-211ENST00000556536 J3KRW8 73 aa12.7□□□□□ -0.38
TUBB3-211ENST00000556536 CRXO43186 299 aaPredicted RBP12.7□□□□□ -0.38
TUBB3-211ENST00000556536 PDE6DO43924 150 aa12.7□□□□□ -0.38
TUBB3-211ENST00000556536 LEPP41159 167 aa12.7□□□□□ -0.38
TUBB3-211ENST00000556536 SRSF3P84103 164 aaKnown RBP12.7□□□□□ -0.38
TUBB3-211ENST00000556536 PRNTQ86SH4 94 aa12.7□□□□□ -0.38
TUBB3-211ENST00000556536 COL7A1Q02388 2944 aa12.69□□□□□ -0.38
TUBB3-211ENST00000556536 UBE2CO00762 179 aa12.69□□□□□ -0.38
TUBB3-211ENST00000556536 CRISP2P16562 243 aa12.69□□□□□ -0.38
TUBB3-211ENST00000556536 CDKN1BP46527 198 aa12.69□□□□□ -0.38
TUBB3-211ENST00000556536 PRR9Q5T870 116 aa12.69□□□□□ -0.38
TUBB3-211ENST00000556536 Q86TA4 180 aa12.69□□□□□ -0.38
TUBB3-211ENST00000556536 ZFAND2AQ8N6M9 145 aa12.69□□□□□ -0.38
TUBB3-211ENST00000556536 CSNK1G2-AS1Q8NCQ2 148 aa12.69□□□□□ -0.38
TUBB3-211ENST00000556536 FMC1Q96HJ9 113 aa12.69□□□□□ -0.38
TUBB3-211ENST00000556536 B9D2Q9BPU9 175 aa12.69□□□□□ -0.38
TUBB3-211ENST00000556536 DERL1Q9BUN8 251 aa12.69□□□□□ -0.38
TUBB3-211ENST00000556536 RETNQ9HD89 108 aa12.69□□□□□ -0.38
TUBB3-211ENST00000556536 MED9Q9NWA0 146 aa12.69□□□□□ -0.38
TUBB3-211ENST00000556536 C9JQL5 133 aa12.68□□□□□ -0.38
TUBB3-211ENST00000556536 TSPOP30536 169 aa12.68□□□□□ -0.38
TUBB3-211ENST00000556536 UBE2G1P62253 170 aa12.68□□□□□ -0.38
TUBB3-211ENST00000556536 TMEM183BQ1AE95 376 aa12.68□□□□□ -0.38
TUBB3-211ENST00000556536 DEFB135Q30KP9 77 aa12.68□□□□□ -0.38
TUBB3-211ENST00000556536 GFI1BQ5VTD9 330 aa12.68□□□□□ -0.38
TUBB3-211ENST00000556536 LENEPQ9Y5L5 61 aa12.68□□□□□ -0.38
TUBB3-211ENST00000556536 HUWE1Q7Z6Z7 4374 aaKnown RBP12.68□□□□□ -0.38
TUBB3-211ENST00000556536 TRBV7-9A0A0J9YWB2 115 aa12.67□□□□□ -0.38
TUBB3-211ENST00000556536 TRBV6-1A0A0K0K1D8 114 aa12.67□□□□□ -0.38
TUBB3-211ENST00000556536 FBLL1A6NHQ2 334 aaKnown RBP12.67□□□□□ -0.38
TUBB3-211ENST00000556536 KLLNB2CW77 178 aa12.67□□□□□ -0.38
TUBB3-211ENST00000556536 AMBPP02760 352 aa12.67□□□□□ -0.38
TUBB3-211ENST00000556536 SRP19P09132 144 aaKnown RBP12.67□□□□□ -0.38
TUBB3-211ENST00000556536 RBMY1A1P0DJD3 496 aaKnown RBP12.67□□□□□ -0.38
TUBB3-211ENST00000556536 RBMY1CP0DJD4 496 aa12.67□□□□□ -0.38
TUBB3-211ENST00000556536 RPL35P42766 123 aaKnown RBP12.67□□□□□ -0.38
TUBB3-211ENST00000556536 BTN1A1Q13410 526 aa12.67□□□□□ -0.38
TUBB3-211ENST00000556536 RBMY1FQ15415 496 aaKnown RBP12.67□□□□□ -0.38
TUBB3-211ENST00000556536 Q6ZWC4 215 aa12.67□□□□□ -0.38
TUBB3-211ENST00000556536 IGF2BP2-AS1Q96M15 143 aa12.67□□□□□ -0.38
TUBB3-211ENST00000556536 C8orf49Q96NF6 230 aa12.67□□□□□ -0.38
TUBB3-211ENST00000556536 C1QTNF4Q9BXJ3 329 aa12.67□□□□□ -0.38
TUBB3-211ENST00000556536 TREM1Q9NP99 234 aa12.67□□□□□ -0.38
TUBB3-211ENST00000556536 GPX1P07203 203 aa12.66□□□□□ -0.38
TUBB3-211ENST00000556536 RNASE4P34096 147 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms