RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 RNF222A6NCQ9 220 aa8.23□□□□□ -1.09
SLIRP-205ENST00000556310 IGLL5B9A064 214 aa8.23□□□□□ -1.09
SLIRP-205ENST00000556310 H7BYZ3 331 aa8.23□□□□□ -1.09
SLIRP-205ENST00000556310 LY6G6CO95867 125 aa8.23□□□□□ -1.09
SLIRP-205ENST00000556310 CT45A10P0DMU9 189 aa8.23□□□□□ -1.09
SLIRP-205ENST00000556310 RAB2AP61019 212 aa8.23□□□□□ -1.09
SLIRP-205ENST00000556310 LYPD1Q8N2G4 141 aa8.23□□□□□ -1.09
SLIRP-205ENST00000556310 HSD17B11Q8NBQ5 300 aa8.23□□□□□ -1.09
SLIRP-205ENST00000556310 OR2G3Q8NGZ4 309 aa8.23□□□□□ -1.09
SLIRP-205ENST00000556310 LINC01587Q99440 93 aa8.23□□□□□ -1.09
SLIRP-205ENST00000556310 NIPSNAP3BQ9BS92 247 aa8.23□□□□□ -1.09
SLIRP-205ENST00000556310 TNFSF18Q9UNG2 199 aa8.23□□□□□ -1.09
SLIRP-205ENST00000556310 DNAH6Q9C0G6 4158 aa8.22□□□□□ -1.09
SLIRP-205ENST00000556310 IGKV2-40A0A087WW87 121 aaPredicted RBP8.22□□□□□ -1.09
SLIRP-205ENST00000556310 LYRM9A8MSI8 78 aa8.22□□□□□ -1.09
SLIRP-205ENST00000556310 G3V3Q6 166 aa8.22□□□□□ -1.09
SLIRP-205ENST00000556310 IGKV2D-40P01614 121 aaPredicted RBP8.22□□□□□ -1.09
SLIRP-205ENST00000556310 KIR3DS1Q14943 382 aa8.22□□□□□ -1.09
SLIRP-205ENST00000556310 LGALS9CQ6DKI2 356 aa8.22□□□□□ -1.09
SLIRP-205ENST00000556310 FAM122CQ6P4D5 195 aa8.22□□□□□ -1.09
SLIRP-205ENST00000556310 PQLC2Q6ZP29 291 aa8.22□□□□□ -1.09
SLIRP-205ENST00000556310 Q8N3U1 123 aa8.22□□□□□ -1.09
SLIRP-205ENST00000556310 C16orf74Q96GX8 76 aa8.22□□□□□ -1.09
SLIRP-205ENST00000556310 LINC00477Q96M19 166 aa8.22□□□□□ -1.09
SLIRP-205ENST00000556310 IGHV4-4A0A075B6R2 117 aa8.21□□□□□ -1.1
SLIRP-205ENST00000556310 A0A1W2PPV4 95 aa8.21□□□□□ -1.1
SLIRP-205ENST00000556310 PLAC8L1A1L4L8 177 aa8.21□□□□□ -1.1
SLIRP-205ENST00000556310 PRM2P04554 102 aa8.21□□□□□ -1.1
SLIRP-205ENST00000556310 AZU1P20160 251 aa8.21□□□□□ -1.1
SLIRP-205ENST00000556310 ATP6V0CP27449 155 aa8.21□□□□□ -1.1
SLIRP-205ENST00000556310 ERCC8Q13216 396 aa8.21□□□□□ -1.1
SLIRP-205ENST00000556310 ZNF493Q6ZR52 646 aa8.21□□□□□ -1.1
SLIRP-205ENST00000556310 C9orf47Q6ZRZ4 202 aa8.21□□□□□ -1.1
SLIRP-205ENST00000556310 OR10G4Q8NGN3 311 aa8.21□□□□□ -1.1
SLIRP-205ENST00000556310 OR10G9Q8NGN4 311 aa8.21□□□□□ -1.1
SLIRP-205ENST00000556310 OR10G7Q8NGN6 311 aa8.21□□□□□ -1.1
SLIRP-205ENST00000556310 TMEM263Q8WUH6 116 aaKnown RBP8.21□□□□□ -1.1
SLIRP-205ENST00000556310 FAM19A4Q96LR4 140 aa8.21□□□□□ -1.1
SLIRP-205ENST00000556310 AGPAT4-IT1Q9H0P7 198 aa8.21□□□□□ -1.1
SLIRP-205ENST00000556310 Q9H3A6 140 aa8.21□□□□□ -1.1
SLIRP-205ENST00000556310 APLNQ9ULZ1 77 aa8.21□□□□□ -1.1
SLIRP-205ENST00000556310 KMT2AQ03164 3969 aa8.2□□□□□ -1.1
SLIRP-205ENST00000556310 BORCS7-ASMTA0A0B4J1R7 106 aa8.2□□□□□ -1.1
SLIRP-205ENST00000556310 KLLNB2CW77 178 aa8.2□□□□□ -1.1
SLIRP-205ENST00000556310 J3KRW8 73 aa8.2□□□□□ -1.1
SLIRP-205ENST00000556310 EIF3GO75821 320 aaKnown RBP eCLIP8.2□□□□□ -1.13e-6■□□□□ 9.7
SLIRP-205ENST00000556310 MBP02144 154 aa8.2□□□□□ -1.1
SLIRP-205ENST00000556310 SLC25A5P05141 298 aaKnown RBP8.2□□□□□ -1.1
SLIRP-205ENST00000556310 CRISP2P16562 243 aa8.2□□□□□ -1.1
SLIRP-205ENST00000556310 CSN1S1P47710 185 aa8.2□□□□□ -1.1
SLIRP-205ENST00000556310 CDC34P49427 236 aaPredicted RBP8.2□□□□□ -1.1
SLIRP-205ENST00000556310 DAD1P61803 113 aa8.2□□□□□ -1.1
SLIRP-205ENST00000556310 RANP62826 216 aaKnown RBP8.2□□□□□ -1.1
SLIRP-205ENST00000556310 SERF2P84101 59 aa8.2□□□□□ -1.1
SLIRP-205ENST00000556310 TMEM78Q5T7P6 136 aa8.2□□□□□ -1.1
SLIRP-205ENST00000556310 RPL7L1Q6DKI1 246 aaKnown RBP8.2□□□□□ -1.1
SLIRP-205ENST00000556310 RNASE8Q8TDE3 154 aaKnown RBP8.2□□□□□ -1.1
SLIRP-205ENST00000556310 SH3BGRL3Q9H299 93 aa8.2□□□□□ -1.1
SLIRP-205ENST00000556310 TRAV12-3A0A0B4J271 114 aa8.19□□□□□ -1.1
SLIRP-205ENST00000556310 C7orf71A4D174 169 aa8.19□□□□□ -1.1
SLIRP-205ENST00000556310 RBAKDNA6NC62 111 aa8.19□□□□□ -1.1
SLIRP-205ENST00000556310 NMBP08949 121 aa8.19□□□□□ -1.1
SLIRP-205ENST00000556310 HTN1P15515 57 aa8.19□□□□□ -1.1
SLIRP-205ENST00000556310 GNPNAT1Q96EK6 184 aaPredicted RBP8.19□□□□□ -1.1
SLIRP-205ENST00000556310 FAM210BQ96KR6 192 aa8.19□□□□□ -1.1
SLIRP-205ENST00000556310 VGLL1Q99990 258 aa8.19□□□□□ -1.1
SLIRP-205ENST00000556310 PYGO2Q9BRQ0 406 aa8.19□□□□□ -1.1
SLIRP-205ENST00000556310 OTORQ9NRC9 128 aa8.19□□□□□ -1.1
SLIRP-205ENST00000556310 TMA7Q9Y2S6 64 aaKnown RBP8.19□□□□□ -1.1
SLIRP-205ENST00000556310 TRBV7-9A0A0J9YWB2 115 aa8.18□□□□□ -1.1
SLIRP-205ENST00000556310 HMGB3O15347 200 aaKnown RBP8.18□□□□□ -1.1
SLIRP-205ENST00000556310 ARPC5O15511 151 aa8.18□□□□□ -1.1
SLIRP-205ENST00000556310 STAG3L2P0CL84 134 aa8.18□□□□□ -1.1
SLIRP-205ENST00000556310 STAG3L3P0CL85 134 aa8.18□□□□□ -1.1
SLIRP-205ENST00000556310 ARL14EPLP0DKL9 152 aa8.18□□□□□ -1.1
SLIRP-205ENST00000556310 ZNF138P52744 262 aa8.18□□□□□ -1.1
SLIRP-205ENST00000556310 BTN1A1Q13410 526 aa8.18□□□□□ -1.1
SLIRP-205ENST00000556310 FAM74A1Q5RGS3 127 aa8.18□□□□□ -1.1
SLIRP-205ENST00000556310 CCDC28AQ8IWP9 274 aa8.18□□□□□ -1.1
SLIRP-205ENST00000556310 ZFAND2AQ8N6M9 145 aa8.18□□□□□ -1.1
SLIRP-205ENST00000556310 Q8TAT8 98 aa8.18□□□□□ -1.1
SLIRP-205ENST00000556310 RXFP4Q8TDU9 374 aa8.18□□□□□ -1.1
SLIRP-205ENST00000556310 NDUFAF3Q9BU61 184 aa8.18□□□□□ -1.1
SLIRP-205ENST00000556310 ZNF492Q9P255 531 aa8.18□□□□□ -1.1
SLIRP-205ENST00000556310 TIMM8BQ9Y5J9 83 aaPredicted RBP8.18□□□□□ -1.1
SLIRP-205ENST00000556310 DIRC3C9JPN6 131 aa8.17□□□□□ -1.1
SLIRP-205ENST00000556310 TAAR5O14804 337 aa8.17□□□□□ -1.1
SLIRP-205ENST00000556310 GPX1P07203 203 aa8.17□□□□□ -1.1
SLIRP-205ENST00000556310 HTN3P15516 51 aa8.17□□□□□ -1.1
SLIRP-205ENST00000556310 CD300CQ08708 224 aa8.17□□□□□ -1.1
SLIRP-205ENST00000556310 PRR9Q5T870 116 aa8.17□□□□□ -1.1
SLIRP-205ENST00000556310 ARL6IP6Q8N6S5 226 aa8.17□□□□□ -1.1
SLIRP-205ENST00000556310 CMTM2Q8TAZ6 248 aa8.17□□□□□ -1.1
SLIRP-205ENST00000556310 RAB24Q969Q5 203 aa8.17□□□□□ -1.1
SLIRP-205ENST00000556310 LINC00467Q9BRT7 94 aa8.17□□□□□ -1.1
SLIRP-205ENST00000556310 SNURFLB1AK76 121 aa8.16□□□□□ -1.1
SLIRP-205ENST00000556310 SMLR1H3BR10 107 aa8.16□□□□□ -1.1
SLIRP-205ENST00000556310 ZNF324O75467 553 aaPredicted RBP8.16□□□□□ -1.1
SLIRP-205ENST00000556310 DEFB130BP0DP73 79 aa8.16□□□□□ -1.1
SLIRP-205ENST00000556310 DEFB130AP0DP74 79 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms