RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 VGLL1Q99990 258 aa10.85□□□□□ -0.67
ACTN1-217ENST00000556203 C20orf144Q9BQM9 153 aa10.85□□□□□ -0.67
ACTN1-217ENST00000556203 PLA2G2EQ9NZK7 142 aa10.85□□□□□ -0.67
ACTN1-217ENST00000556203 DEFB131BA0A096LNP1 70 aa10.84□□□□□ -0.67
ACTN1-217ENST00000556203 IGLL5B9A064 214 aa10.84□□□□□ -0.67
ACTN1-217ENST00000556203 TAAR5O14804 337 aa10.84□□□□□ -0.67
ACTN1-217ENST00000556203 STAG3L2P0CL84 134 aa10.84□□□□□ -0.67
ACTN1-217ENST00000556203 STAG3L3P0CL85 134 aa10.84□□□□□ -0.67
ACTN1-217ENST00000556203 ARL14EPLP0DKL9 152 aa10.84□□□□□ -0.67
ACTN1-217ENST00000556203 TMEM78Q5T7P6 136 aa10.84□□□□□ -0.67
ACTN1-217ENST00000556203 LINC00476Q8WZB0 136 aa10.84□□□□□ -0.67
ACTN1-217ENST00000556203 RAB24Q969Q5 203 aa10.84□□□□□ -0.67
ACTN1-217ENST00000556203 FAM19A4Q96LR4 140 aa10.84□□□□□ -0.67
ACTN1-217ENST00000556203 NIPSNAP3BQ9BS92 247 aa10.84□□□□□ -0.67
ACTN1-217ENST00000556203 OTORQ9NRC9 128 aa10.84□□□□□ -0.67
ACTN1-217ENST00000556203 TRAV12-3A0A0B4J271 114 aa10.83□□□□□ -0.68
ACTN1-217ENST00000556203 PLAC8L1A1L4L8 177 aa10.83□□□□□ -0.68
ACTN1-217ENST00000556203 LY6G6CO95867 125 aa10.83□□□□□ -0.68
ACTN1-217ENST00000556203 OR11H4Q8NGC9 324 aa10.83□□□□□ -0.68
ACTN1-217ENST00000556203 RXFP4Q8TDU9 374 aa10.83□□□□□ -0.68
ACTN1-217ENST00000556203 C16orf74Q96GX8 76 aa10.83□□□□□ -0.68
ACTN1-217ENST00000556203 HYLS1Q96M11 299 aa10.83□□□□□ -0.68
ACTN1-217ENST00000556203 ACTR3CQ9C0K3 210 aaPredicted RBP10.83□□□□□ -0.68
ACTN1-217ENST00000556203 CYTL1Q9NRR1 136 aa10.83□□□□□ -0.68
ACTN1-217ENST00000556203 ZNF492Q9P255 531 aa10.83□□□□□ -0.68
ACTN1-217ENST00000556203 HYDINQ4G0P3 5121 aa10.82□□□□□ -0.68
ACTN1-217ENST00000556203 C7orf71A4D174 169 aa10.82□□□□□ -0.68
ACTN1-217ENST00000556203 RBAKDNA6NC62 111 aa10.82□□□□□ -0.68
ACTN1-217ENST00000556203 PGPA6NDG6 321 aa10.82□□□□□ -0.68
ACTN1-217ENST00000556203 KLLNB2CW77 178 aa10.82□□□□□ -0.68
ACTN1-217ENST00000556203 DIRC3C9JPN6 131 aa10.82□□□□□ -0.68
ACTN1-217ENST00000556203 SLC25A5P05141 298 aaKnown RBP10.82□□□□□ -0.68
ACTN1-217ENST00000556203 CRISP2P16562 243 aa10.82□□□□□ -0.68
ACTN1-217ENST00000556203 FAM74A1Q5RGS3 127 aa10.82□□□□□ -0.68
ACTN1-217ENST00000556203 Q8TAT8 98 aa10.82□□□□□ -0.68
ACTN1-217ENST00000556203 CMTM2Q8TAZ6 248 aa10.82□□□□□ -0.68
ACTN1-217ENST00000556203 GCHFRP30047 84 aa10.81□□□□□ -0.68
ACTN1-217ENST00000556203 RNASE4P34096 147 aaKnown RBP10.81□□□□□ -0.68
ACTN1-217ENST00000556203 ZNF138P52744 262 aa10.81□□□□□ -0.68
ACTN1-217ENST00000556203 TCTAP57738 103 aa10.81□□□□□ -0.68
ACTN1-217ENST00000556203 DAD1P61803 113 aa10.81□□□□□ -0.68
ACTN1-217ENST00000556203 CD300CQ08708 224 aa10.81□□□□□ -0.68
ACTN1-217ENST00000556203 BTN1A1Q13410 526 aa10.81□□□□□ -0.68
ACTN1-217ENST00000556203 ZNF345Q14585 488 aa10.81□□□□□ -0.68
ACTN1-217ENST00000556203 SSX7Q7RTT5 188 aa10.81□□□□□ -0.68
ACTN1-217ENST00000556203 CCDC28AQ8IWP9 274 aa10.81□□□□□ -0.68
ACTN1-217ENST00000556203 KCNRGQ8N5I3 272 aa10.81□□□□□ -0.68
ACTN1-217ENST00000556203 ZFAND2AQ8N6M9 145 aa10.81□□□□□ -0.68
ACTN1-217ENST00000556203 RNASE8Q8TDE3 154 aaKnown RBP10.81□□□□□ -0.68
ACTN1-217ENST00000556203 TMEM263Q8WUH6 116 aaKnown RBP10.81□□□□□ -0.68
ACTN1-217ENST00000556203 ARPC5LQ9BPX5 153 aa10.81□□□□□ -0.68
ACTN1-217ENST00000556203 RPH3ALQ9UNE2 315 aa10.81□□□□□ -0.68
ACTN1-217ENST00000556203 ALMS1Q8TCU4 4167 aa10.8□□□□□ -0.68
ACTN1-217ENST00000556203 IGHV4-4A0A075B6R2 117 aa10.8□□□□□ -0.68
ACTN1-217ENST00000556203 LYRM9A8MSI8 78 aa10.8□□□□□ -0.68
ACTN1-217ENST00000556203 HMSDA8MTL9 139 aa10.8□□□□□ -0.68
ACTN1-217ENST00000556203 CXorf1O96002 111 aa10.8□□□□□ -0.68
ACTN1-217ENST00000556203 GPX1P07203 203 aa10.8□□□□□ -0.68
ACTN1-217ENST00000556203 NMBP08949 121 aa10.8□□□□□ -0.68
ACTN1-217ENST00000556203 AKR1C8PQ5T2L2 129 aa10.8□□□□□ -0.68
ACTN1-217ENST00000556203 ZNF493Q6ZR52 646 aa10.8□□□□□ -0.68
ACTN1-217ENST00000556203 PYGO2Q9BRQ0 406 aa10.8□□□□□ -0.68
ACTN1-217ENST00000556203 APLNQ9ULZ1 77 aa10.8□□□□□ -0.68
ACTN1-217ENST00000556203 LYSTQ99698 3801 aa10.79□□□□□ -0.68
ACTN1-217ENST00000556203 ZNF324O75467 553 aaPredicted RBP10.79□□□□□ -0.68
ACTN1-217ENST00000556203 DEFB130BP0DP73 79 aa10.79□□□□□ -0.68
ACTN1-217ENST00000556203 DEFB130AP0DP74 79 aa10.79□□□□□ -0.68
ACTN1-217ENST00000556203 HTN3P15516 51 aa10.79□□□□□ -0.68
ACTN1-217ENST00000556203 ZNF726P1Q15940 193 aa10.79□□□□□ -0.68
ACTN1-217ENST00000556203 PRR9Q5T870 116 aa10.79□□□□□ -0.68
ACTN1-217ENST00000556203 SUN5Q8TC36 379 aa10.79□□□□□ -0.68
ACTN1-217ENST00000556203 TMEM167BQ9NRX6 74 aa10.79□□□□□ -0.68
ACTN1-217ENST00000556203 TIMM8BQ9Y5J9 83 aaPredicted RBP10.79□□□□□ -0.68
ACTN1-217ENST00000556203 A0A0D9SG52 128 aa10.78□□□□□ -0.68
ACTN1-217ENST00000556203 TRBV7-9A0A0J9YWB2 115 aa10.78□□□□□ -0.68
ACTN1-217ENST00000556203 CTXND1A0A1B0GTU2 59 aa10.78□□□□□ -0.68
ACTN1-217ENST00000556203 GNG5P63218 68 aa10.78□□□□□ -0.68
ACTN1-217ENST00000556203 LGALS9CQ6DKI2 356 aa10.78□□□□□ -0.68
ACTN1-217ENST00000556203 Q6ZNX1 250 aa10.78□□□□□ -0.68
ACTN1-217ENST00000556203 GOLT1AQ6ZVE7 132 aa10.78□□□□□ -0.68
ACTN1-217ENST00000556203 IQCF2Q8IXL9 164 aa10.78□□□□□ -0.68
ACTN1-217ENST00000556203 NOP10Q9NPE3 64 aaKnown RBP10.78□□□□□ -0.68
ACTN1-217ENST00000556203 DNAH1Q9P2D7 4330 aa10.77□□□□□ -0.68
ACTN1-217ENST00000556203 KANTRA0A1W2PQU2 76 aa10.77□□□□□ -0.69
ACTN1-217ENST00000556203 BCL2L11O43521 198 aa10.77□□□□□ -0.69
ACTN1-217ENST00000556203 ARL6IP6Q8N6S5 226 aa10.77□□□□□ -0.69
ACTN1-217ENST00000556203 ST6GAL2Q96JF0 529 aa10.77□□□□□ -0.69
ACTN1-217ENST00000556203 CBY3A6NI87 242 aa10.76□□□□□ -0.69
ACTN1-217ENST00000556203 RGS13O14921 159 aa10.76□□□□□ -0.69
ACTN1-217ENST00000556203 Q6ZQT7 251 aa10.76□□□□□ -0.69
ACTN1-217ENST00000556203 TMED6Q8WW62 240 aa10.76□□□□□ -0.69
ACTN1-217ENST00000556203 LINC00467Q9BRT7 94 aa10.76□□□□□ -0.69
ACTN1-217ENST00000556203 NDUFAF3Q9BU61 184 aa10.76□□□□□ -0.69
ACTN1-217ENST00000556203 ZNF471Q9BX82 626 aaPredicted RBP10.76□□□□□ -0.69
ACTN1-217ENST00000556203 TRAV8-1A0A0A6YYK1 113 aa10.75□□□□□ -0.69
ACTN1-217ENST00000556203 SNURFLB1AK76 121 aa10.75□□□□□ -0.69
ACTN1-217ENST00000556203 GGTLC3B5MD39 225 aa10.75□□□□□ -0.69
ACTN1-217ENST00000556203 FGF8P55075 233 aaPredicted RBP10.75□□□□□ -0.69
ACTN1-217ENST00000556203 EIF4E3Q8N5X7 224 aaKnown RBP10.75□□□□□ -0.69
ACTN1-217ENST00000556203 C5orf17Q8NAS9 161 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms