RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 ATP6V0E1O15342 81 aa13.41□□□□□ -0.26
SHOX-204ENST00000554971 FCGR2BP31994 310 aaPredicted RBP13.41□□□□□ -0.26
SHOX-204ENST00000554971 FANCD2OSQ96PS1 177 aa13.41□□□□□ -0.26
SHOX-204ENST00000554971 ALKBH7Q9BT30 221 aaPredicted RBP13.41□□□□□ -0.26
SHOX-204ENST00000554971 FAM103A1Q9BTL3 118 aaKnown RBP13.41□□□□□ -0.26
SHOX-204ENST00000554971 FBLL1A6NHQ2 334 aaKnown RBP13.4□□□□□ -0.26
SHOX-204ENST00000554971 IGLV2-11P01706 119 aa13.4□□□□□ -0.26
SHOX-204ENST00000554971 IGF1P05019 195 aa13.4□□□□□ -0.26
SHOX-204ENST00000554971 RAB4AP20338 218 aa13.4□□□□□ -0.26
SHOX-204ENST00000554971 KLK9Q2XQG4 91 aa13.4□□□□□ -0.26
SHOX-204ENST00000554971 HIST2H2BDQ6DRA6 164 aa13.4□□□□□ -0.26
SHOX-204ENST00000554971 LINC00469Q8N7U9 141 aa13.4□□□□□ -0.26
SHOX-204ENST00000554971 WFDC12Q8WWY7 111 aa13.4□□□□□ -0.26
SHOX-204ENST00000554971 KLK9Q9UKQ9 250 aa13.4□□□□□ -0.26
SHOX-204ENST00000554971 RPH3ALQ9UNE2 315 aa13.4□□□□□ -0.26
SHOX-204ENST00000554971 HAX1O00165 279 aa13.39□□□□□ -0.27
SHOX-204ENST00000554971 MRPS12O15235 138 aaKnown RBP13.39□□□□□ -0.27
SHOX-204ENST00000554971 IL4P05112 153 aa13.39□□□□□ -0.27
SHOX-204ENST00000554971 GDF5OSQ5U4N7 250 aa13.39□□□□□ -0.27
SHOX-204ENST00000554971 KLHDC1Q8N7A1 406 aa13.39□□□□□ -0.27
SHOX-204ENST00000554971 A0A1B0GW15 77 aa13.39□□□□□ -0.27
SHOX-204ENST00000554971 G3V318 75 aa13.39□□□□□ -0.27
SHOX-204ENST00000554971 SNRPCP09234 159 aaKnown RBP13.39□□□□□ -0.27
SHOX-204ENST00000554971 C19orf54Q5BKX5 351 aa13.39□□□□□ -0.27
SHOX-204ENST00000554971 SIGLEC15Q6ZMC9 328 aa13.39□□□□□ -0.27
SHOX-204ENST00000554971 VAMP8Q9BV40 100 aa13.39□□□□□ -0.27
SHOX-204ENST00000554971 C21orf62Q9NYP8 219 aa13.39□□□□□ -0.27
SHOX-204ENST00000554971 PSG9Q00887 426 aa13.38□□□□□ -0.27
SHOX-204ENST00000554971 CFHR3Q02985 330 aa13.38□□□□□ -0.27
SHOX-204ENST00000554971 ASPHD1Q5U4P2 390 aa13.38□□□□□ -0.27
SHOX-204ENST00000554971 LINC00322Q6ZN03 302 aaPredicted RBP13.38□□□□□ -0.27
SHOX-204ENST00000554971 GOLT1AQ6ZVE7 132 aa13.38□□□□□ -0.27
SHOX-204ENST00000554971 BORCS7Q96B45 105 aa13.38□□□□□ -0.27
SHOX-204ENST00000554971 ZNF414Q96IQ9 312 aa13.38□□□□□ -0.27
SHOX-204ENST00000554971 RCHY1Q96PM5 261 aa13.38□□□□□ -0.27
SHOX-204ENST00000554971 MIEN1Q9BRT3 115 aa13.38□□□□□ -0.27
SHOX-204ENST00000554971 FBXL7Q9UJT9 491 aa13.38□□□□□ -0.27
SHOX-204ENST00000554971 DIRC3C9JPN6 131 aa13.37□□□□□ -0.27
SHOX-204ENST00000554971 SSTP61278 116 aa13.37□□□□□ -0.27
SHOX-204ENST00000554971 Q6AWC8 147 aa13.37□□□□□ -0.27
SHOX-204ENST00000554971 VN1R17PQ8TDU5 208 aa13.37□□□□□ -0.27
SHOX-204ENST00000554971 MGAM2Q2M2H8 2515 aa13.37□□□□□ -0.27
SHOX-204ENST00000554971 M0R143 59 aa13.37□□□□□ -0.27
SHOX-204ENST00000554971 CAMPP49913 170 aa13.37□□□□□ -0.27
SHOX-204ENST00000554971 CRIP2P52943 208 aaPredicted RBP13.37□□□□□ -0.27
SHOX-204ENST00000554971 PSG3Q16557 428 aa13.37□□□□□ -0.27
SHOX-204ENST00000554971 EXOC3-AS1Q8N2X6 119 aa13.37□□□□□ -0.27
SHOX-204ENST00000554971 GTSF1Q8WW33 167 aa13.37□□□□□ -0.27
SHOX-204ENST00000554971 SGK494Q96LW2 274 aa13.37□□□□□ -0.27
SHOX-204ENST00000554971 NDFIP1Q9BT67 221 aa13.37□□□□□ -0.27
SHOX-204ENST00000554971 AAMDCQ9H7C9 122 aa13.37□□□□□ -0.27
SHOX-204ENST00000554971 ZNF580Q9UK33 172 aa13.37□□□□□ -0.27
SHOX-204ENST00000554971 HSBP1O75506 76 aa13.36□□□□□ -0.27
SHOX-204ENST00000554971 RPL7P18124 248 aaKnown RBP13.36□□□□□ -0.27
SHOX-204ENST00000554971 PPIFP30405 207 aaKnown RBP13.36□□□□□ -0.27
SHOX-204ENST00000554971 KRTDAPP60985 99 aa13.36□□□□□ -0.27
SHOX-204ENST00000554971 TCTEX1D4Q5JR98 221 aa13.36□□□□□ -0.27
SHOX-204ENST00000554971 TCF24Q7RTU0 167 aa13.36□□□□□ -0.27
SHOX-204ENST00000554971 PRNTQ86SH4 94 aa13.36□□□□□ -0.27
SHOX-204ENST00000554971 NIT1Q86X76 327 aa13.36□□□□□ -0.27
SHOX-204ENST00000554971 H3BTX0 84 aa13.35□□□□□ -0.27
SHOX-204ENST00000554971 PMCHP20382 165 aa13.35□□□□□ -0.27
SHOX-204ENST00000554971 CSN1S1P47710 185 aa13.35□□□□□ -0.27
SHOX-204ENST00000554971 C11orf44Q8N8P7 122 aa13.35□□□□□ -0.27
SHOX-204ENST00000554971 CHCHD1Q96BP2 118 aaKnown RBP13.35□□□□□ -0.27
SHOX-204ENST00000554971 PSG8Q9UQ74 426 aa13.35□□□□□ -0.27
SHOX-204ENST00000554971 NBEAL1Q6ZS30 2694 aa13.35□□□□□ -0.27
SHOX-204ENST00000554971 PMCHL1Q16048 86 aa13.35□□□□□ -0.27
SHOX-204ENST00000554971 ECSCRQ19T08 205 aa13.35□□□□□ -0.27
SHOX-204ENST00000554971 Q56UQ5 140 aa13.35□□□□□ -0.27
SHOX-204ENST00000554971 COX8CQ7Z4L0 72 aa13.35□□□□□ -0.27
SHOX-204ENST00000554971 Q8N976 141 aa13.35□□□□□ -0.27
SHOX-204ENST00000554971 GATD1Q8NB37 220 aa13.35□□□□□ -0.27
SHOX-204ENST00000554971 NOTCH3Q9UM47 2321 aa13.34□□□□□ -0.27
SHOX-204ENST00000554971 F8W735 103 aaPredicted RBP13.34□□□□□ -0.27
SHOX-204ENST00000554971 NDUFB8O95169 186 aa13.34□□□□□ -0.27
SHOX-204ENST00000554971 CD33P20138 364 aa13.34□□□□□ -0.27
SHOX-204ENST00000554971 RAB9AP51151 201 aa13.34□□□□□ -0.27
SHOX-204ENST00000554971 OR2D3Q8NGH3 330 aa13.34□□□□□ -0.27
SHOX-204ENST00000554971 PGLYRP4Q96LB8 373 aa13.34□□□□□ -0.27
SHOX-204ENST00000554971 CITED1Q99966 193 aa13.34□□□□□ -0.27
SHOX-204ENST00000554971 TRAV41A0A0B4J266 112 aa13.33□□□□□ -0.28
SHOX-204ENST00000554971 RIGQ13278 110 aa13.33□□□□□ -0.28
SHOX-204ENST00000554971 LCNL1Q6ZST4 164 aa13.33□□□□□ -0.28
SHOX-204ENST00000554971 C3orf79P0CE67 100 aa13.33□□□□□ -0.28
SHOX-204ENST00000554971 CD28P10747 220 aa13.33□□□□□ -0.28
SHOX-204ENST00000554971 C12orf54Q6X4T0 127 aa13.33□□□□□ -0.28
SHOX-204ENST00000554971 FAM110DQ8TAY7 271 aaPredicted RBP13.33□□□□□ -0.28
SHOX-204ENST00000554971 ZNF747Q9BV97 191 aa13.33□□□□□ -0.28
SHOX-204ENST00000554971 TRAV8-1A0A0A6YYK1 113 aa13.32□□□□□ -0.28
SHOX-204ENST00000554971 C20orf202A1L168 122 aa13.32□□□□□ -0.28
SHOX-204ENST00000554971 CHEK1O14757 476 aa13.32□□□□□ -0.28
SHOX-204ENST00000554971 IGHG4P01861 327 aa13.32□□□□□ -0.28
SHOX-204ENST00000554971 SAPCD1Q5SSQ6 148 aa13.32□□□□□ -0.28
SHOX-204ENST00000554971 A0A1B0GUT8 65 aa13.31□□□□□ -0.28
SHOX-204ENST00000554971 IGLV1-40P01703 118 aa13.31□□□□□ -0.28
SHOX-204ENST00000554971 APOHP02749 345 aaPredicted RBP13.31□□□□□ -0.28
SHOX-204ENST00000554971 CT45A10P0DMU9 189 aa13.31□□□□□ -0.28
SHOX-204ENST00000554971 PSMB8P28062 276 aa13.31□□□□□ -0.28
SHOX-204ENST00000554971 UNQ5815/PRO19632Q6UWF5 114 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms