RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 K7EP13 123 aa11.19□□□□□ -0.62
VTI1B-204ENST00000554659 C2orf66Q6UXQ4 117 aa11.19□□□□□ -0.62
VTI1B-204ENST00000554659 SS18Q15532 418 aa11.18□□□□□ -0.62
VTI1B-204ENST00000554659 COX8AP10176 69 aa11.18□□□□□ -0.62
VTI1B-204ENST00000554659 PHF3Q92576 2039 aaKnown RBP11.18□□□□□ -0.62
VTI1B-204ENST00000554659 LY6DQ14210 128 aa11.18□□□□□ -0.62
VTI1B-204ENST00000554659 UBE2DNLQ8IWF7 75 aa11.18□□□□□ -0.62
VTI1B-204ENST00000554659 GAGE1Q13065 139 aa11.18□□□□□ -0.62
VTI1B-204ENST00000554659 MRPL51Q4U2R6 128 aaKnown RBP11.18□□□□□ -0.62
VTI1B-204ENST00000554659 H3BRN7 92 aa11.17□□□□□ -0.62
VTI1B-204ENST00000554659 IGLL1P15814 213 aa11.17□□□□□ -0.62
VTI1B-204ENST00000554659 HAMPP81172 84 aa11.17□□□□□ -0.62
VTI1B-204ENST00000554659 MRAPQ8TCY5 172 aa11.17□□□□□ -0.62
VTI1B-204ENST00000554659 FANCMQ8IYD8 2048 aa11.17□□□□□ -0.62
VTI1B-204ENST00000554659 OVOL3O00110 214 aa11.17□□□□□ -0.62
VTI1B-204ENST00000554659 CACNA1BQ00975 2339 aa11.17□□□□□ -0.62
VTI1B-204ENST00000554659 VOPP1Q96AW1 172 aa11.17□□□□□ -0.62
VTI1B-204ENST00000554659 ZNF503-AS2A6NEH8 195 aa11.17□□□□□ -0.62
VTI1B-204ENST00000554659 UBE2E1P51965 193 aa11.17□□□□□ -0.62
VTI1B-204ENST00000554659 RBMY1FQ15415 496 aaKnown RBP11.17□□□□□ -0.62
VTI1B-204ENST00000554659 TEX36Q5VZQ5 186 aa11.17□□□□□ -0.62
VTI1B-204ENST00000554659 KNCNA6PVL3 124 aa11.17□□□□□ -0.62
VTI1B-204ENST00000554659 THAP8Q8NA92 274 aa11.17□□□□□ -0.62
VTI1B-204ENST00000554659 PRR25Q96S07 402 aa11.17□□□□□ -0.62
VTI1B-204ENST00000554659 WT1-ASQ06250 92 aa11.16□□□□□ -0.62
VTI1B-204ENST00000554659 F8W1H4 67 aa11.16□□□□□ -0.62
VTI1B-204ENST00000554659 ATP6V0E1O15342 81 aa11.16□□□□□ -0.62
VTI1B-204ENST00000554659 PMVKQ15126 192 aa11.16□□□□□ -0.62
VTI1B-204ENST00000554659 C1QTNF4Q9BXJ3 329 aa11.16□□□□□ -0.62
VTI1B-204ENST00000554659 UBL5Q9BZL1 73 aa11.16□□□□□ -0.62
VTI1B-204ENST00000554659 FGF6P10767 208 aa11.16□□□□□ -0.62
VTI1B-204ENST00000554659 IFITM1P13164 125 aa11.16□□□□□ -0.62
VTI1B-204ENST00000554659 DEFB130BP0DP73 79 aa11.16□□□□□ -0.62
VTI1B-204ENST00000554659 DEFB130AP0DP74 79 aa11.16□□□□□ -0.62
VTI1B-204ENST00000554659 PFN2P35080 140 aa11.16□□□□□ -0.62
VTI1B-204ENST00000554659 Q8NFD4 153 aa11.16□□□□□ -0.62
VTI1B-204ENST00000554659 K7EP34 96 aa11.15□□□□□ -0.62
VTI1B-204ENST00000554659 DKK1O94907 266 aa11.15□□□□□ -0.62
VTI1B-204ENST00000554659 POU2AF1Q16633 256 aa11.15□□□□□ -0.62
VTI1B-204ENST00000554659 LY6G6EA0A0G2JKS1 128 aa11.15□□□□□ -0.62
VTI1B-204ENST00000554659 PRR20EP86478 221 aa11.15□□□□□ -0.62
VTI1B-204ENST00000554659 PRR20CP86479 221 aa11.15□□□□□ -0.62
VTI1B-204ENST00000554659 PRR20DP86480 221 aa11.15□□□□□ -0.62
VTI1B-204ENST00000554659 PRR20BP86481 221 aa11.15□□□□□ -0.62
VTI1B-204ENST00000554659 PRR20AP86496 221 aa11.15□□□□□ -0.62
VTI1B-204ENST00000554659 U3KQA8 63 aa11.15□□□□□ -0.62
VTI1B-204ENST00000554659 LOXP28300 417 aaPredicted RBP11.15□□□□□ -0.62
VTI1B-204ENST00000554659 FXYD5Q96DB9 178 aa11.15□□□□□ -0.62
VTI1B-204ENST00000554659 BPESC1Q9GZL8 116 aa11.15□□□□□ -0.62
VTI1B-204ENST00000554659 COL4A6Q14031 1691 aa11.15□□□□□ -0.62
VTI1B-204ENST00000554659 PSCAO43653 123 aa11.15□□□□□ -0.63
VTI1B-204ENST00000554659 LY6HO94772 140 aa11.15□□□□□ -0.63
VTI1B-204ENST00000554659 IGLV1-44P01699 117 aa11.15□□□□□ -0.63
VTI1B-204ENST00000554659 RHODO00212 210 aa11.14□□□□□ -0.63
VTI1B-204ENST00000554659 NLRC5Q86WI3 1866 aa11.14□□□□□ -0.63
VTI1B-204ENST00000554659 SIGLEC8Q9NYZ4 499 aa11.14□□□□□ -0.63
VTI1B-204ENST00000554659 MSRB2Q9Y3D2 182 aa11.14□□□□□ -0.63
VTI1B-204ENST00000554659 PLXNA2O75051 1894 aa11.14□□□□□ -0.63
VTI1B-204ENST00000554659 ZNF134P52741 427 aa11.14□□□□□ -0.63
VTI1B-204ENST00000554659 GAGE12HA6NDE8 117 aa11.14□□□□□ -0.63
VTI1B-204ENST00000554659 OR11H6Q8NGC7 330 aa11.14□□□□□ -0.63
VTI1B-204ENST00000554659 VWC2Q2TAL6 325 aa11.13□□□□□ -0.63
VTI1B-204ENST00000554659 FER1L5A0AVI2 2057 aa11.13□□□□□ -0.63
VTI1B-204ENST00000554659 PI4KAP42356 2102 aa11.13□□□□□ -0.63
VTI1B-204ENST00000554659 PKDREJQ9NTG1 2253 aa11.13□□□□□ -0.63
VTI1B-204ENST00000554659 K7EM74 188 aa11.13□□□□□ -0.63
VTI1B-204ENST00000554659 DUX4L9Q6RFH8 374 aaPredicted RBP11.13□□□□□ -0.63
VTI1B-204ENST00000554659 ATP6V0BQ99437 205 aa11.13□□□□□ -0.63
VTI1B-204ENST00000554659 SLX1AQ9BQ83 275 aa11.13□□□□□ -0.63
VTI1B-204ENST00000554659 ACACAQ13085 2346 aa11.13□□□□□ -0.63
VTI1B-204ENST00000554659 TMEM126AQ9H061 195 aa11.13□□□□□ -0.63
VTI1B-204ENST00000554659 TRACP01848 142 aa11.13□□□□□ -0.63
VTI1B-204ENST00000554659 UTF1Q5T230 341 aa11.13□□□□□ -0.63
VTI1B-204ENST00000554659 BVES-AS1Q5T3Y7 98 aa11.13□□□□□ -0.63
VTI1B-204ENST00000554659 WIPF2Q8TF74 440 aaPredicted RBP11.13□□□□□ -0.63
VTI1B-204ENST00000554659 DOCK11Q5JSL3 2073 aa11.12□□□□□ -0.63
VTI1B-204ENST00000554659 IGLV3-9A0A075B6K5 115 aa11.12□□□□□ -0.63
VTI1B-204ENST00000554659 I3L3M4 83 aa11.12□□□□□ -0.63
VTI1B-204ENST00000554659 TAL2Q16559 108 aa11.12□□□□□ -0.63
VTI1B-204ENST00000554659 C8orf86Q6ZUL3 223 aa11.12□□□□□ -0.63
VTI1B-204ENST00000554659 ZC2HC1AQ96GY0 325 aa11.12□□□□□ -0.63
VTI1B-204ENST00000554659 CACNA1HO95180 2353 aa11.12□□□□□ -0.63
VTI1B-204ENST00000554659 H3BMG7 143 aa11.12□□□□□ -0.63
VTI1B-204ENST00000554659 A0A1W2PPM0 123 aa11.12□□□□□ -0.63
VTI1B-204ENST00000554659 DEFB131AP59861 70 aa11.12□□□□□ -0.63
VTI1B-204ENST00000554659 TRAV12-1A0A0B4J245 112 aa11.12□□□□□ -0.63
VTI1B-204ENST00000554659 GAGE12JA6NER3 117 aa11.12□□□□□ -0.63
VTI1B-204ENST00000554659 K7EN84 100 aa11.12□□□□□ -0.63
VTI1B-204ENST00000554659 IGLC1P0CG04 106 aa11.12□□□□□ -0.63
VTI1B-204ENST00000554659 GAGE4Q13068 117 aa11.12□□□□□ -0.63
VTI1B-204ENST00000554659 GAGE5Q13069 117 aa11.12□□□□□ -0.63
VTI1B-204ENST00000554659 SIVA1O15304 175 aa11.11□□□□□ -0.63
VTI1B-204ENST00000554659 LTAP01374 205 aa11.11□□□□□ -0.63
VTI1B-204ENST00000554659 SYNJ2BPP57105 145 aa11.11□□□□□ -0.63
VTI1B-204ENST00000554659 MYO7BQ6PIF6 2116 aa11.11□□□□□ -0.63
VTI1B-204ENST00000554659 IGFL3Q6UXB1 125 aa11.11□□□□□ -0.63
VTI1B-204ENST00000554659 KLHL30-AS1Q8NEE0 82 aa11.11□□□□□ -0.63
VTI1B-204ENST00000554659 PRO1854Q9UHT4 67 aa11.11□□□□□ -0.63
VTI1B-204ENST00000554659 CEACAM8P31997 349 aaPredicted RBP11.11□□□□□ -0.63
VTI1B-204ENST00000554659 KLF2Q9Y5W3 355 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 174.2 ms