RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 TMEM78Q5T7P6 136 aa16.68■□□□□ 0.26
NEK9-203ENST00000553945 Q6ZTC4 211 aa16.68■□□□□ 0.26
NEK9-203ENST00000553945 HYLS1Q96M11 299 aa16.68■□□□□ 0.26
NEK9-203ENST00000553945 OTORQ9NRC9 128 aa16.68■□□□□ 0.26
NEK9-203ENST00000553945 A0A0D9SG52 128 aa16.67■□□□□ 0.26
NEK9-203ENST00000553945 PGPA6NDG6 321 aa16.67■□□□□ 0.26
NEK9-203ENST00000553945 HTN1P15515 57 aa16.67■□□□□ 0.26
NEK9-203ENST00000553945 AKR1C8PQ5T2L2 129 aa16.67■□□□□ 0.26
NEK9-203ENST00000553945 ST6GAL2Q96JF0 529 aa16.67■□□□□ 0.26
NEK9-203ENST00000553945 C20orf144Q9BQM9 153 aa16.67■□□□□ 0.26
NEK9-203ENST00000553945 TRAV12-3A0A0B4J271 114 aa16.66■□□□□ 0.26
NEK9-203ENST00000553945 GCHFRP30047 84 aa16.66■□□□□ 0.26
NEK9-203ENST00000553945 C12orf74Q32Q52 190 aa16.66■□□□□ 0.26
NEK9-203ENST00000553945 FAM74A1Q5RGS3 127 aa16.66■□□□□ 0.26
NEK9-203ENST00000553945 FAM222AQ5U5X8 452 aa16.66■□□□□ 0.26
NEK9-203ENST00000553945 SSX7Q7RTT5 188 aa16.66■□□□□ 0.26
NEK9-203ENST00000553945 YTHDF2Q9Y5A9 579 aaKnown RBP16.66■□□□□ 0.26
NEK9-203ENST00000553945 LCE6AA0A183 80 aa16.65■□□□□ 0.26
NEK9-203ENST00000553945 KANTRA0A1W2PQU2 76 aa16.65■□□□□ 0.26
NEK9-203ENST00000553945 H7BYZ3 331 aa16.65■□□□□ 0.26
NEK9-203ENST00000553945 CXorf1O96002 111 aa16.65■□□□□ 0.26
NEK9-203ENST00000553945 AZU1P20160 251 aa16.65■□□□□ 0.26
NEK9-203ENST00000553945 TAS2R60P59551 318 aa16.65■□□□□ 0.26
NEK9-203ENST00000553945 IQCF2Q8IXL9 164 aa16.65■□□□□ 0.26
NEK9-203ENST00000553945 CMTM2Q8TAZ6 248 aa16.65■□□□□ 0.26
NEK9-203ENST00000553945 RXFP4Q8TDU9 374 aa16.65■□□□□ 0.26
NEK9-203ENST00000553945 DKK2Q9UBU2 259 aa16.65■□□□□ 0.26
NEK9-203ENST00000553945 RPH3ALQ9UNE2 315 aa16.65■□□□□ 0.26
NEK9-203ENST00000553945 hCG_2014768A0A024R1R8 64 aa16.64■□□□□ 0.25
NEK9-203ENST00000553945 DIRC3C9JPN6 131 aa16.64■□□□□ 0.25
NEK9-203ENST00000553945 C11orf94C9JXX5 98 aa16.64■□□□□ 0.25
NEK9-203ENST00000553945 BCL2L11O43521 198 aa16.64■□□□□ 0.25
NEK9-203ENST00000553945 SLC25A5P05141 298 aaKnown RBP16.64■□□□□ 0.25
NEK9-203ENST00000553945 ZNF726P1Q15940 193 aa16.64■□□□□ 0.25
NEK9-203ENST00000553945 FAM19A4Q96LR4 140 aa16.64■□□□□ 0.25
NEK9-203ENST00000553945 ZNF492Q9P255 531 aa16.64■□□□□ 0.25
NEK9-203ENST00000553945 TRAV10A0A0B4J240 114 aa16.63■□□□□ 0.25
NEK9-203ENST00000553945 C7orf71A4D174 169 aa16.63■□□□□ 0.25
NEK9-203ENST00000553945 ZNF138P52744 262 aa16.63■□□□□ 0.25
NEK9-203ENST00000553945 Q8TAT8 98 aa16.63■□□□□ 0.25
NEK9-203ENST00000553945 C2CD4CQ8TF44 421 aa16.63■□□□□ 0.25
NEK9-203ENST00000553945 NIPSNAP3BQ9BS92 247 aa16.63■□□□□ 0.25
NEK9-203ENST00000553945 ZNF471Q9BX82 626 aaPredicted RBP16.63■□□□□ 0.25
NEK9-203ENST00000553945 TMEM167BQ9NRX6 74 aa16.63■□□□□ 0.25
NEK9-203ENST00000553945 CTXND1A0A1B0GTU2 59 aa16.62■□□□□ 0.25
NEK9-203ENST00000553945 TEX48A0A1B0GUV7 120 aa16.62■□□□□ 0.25
NEK9-203ENST00000553945 RBAKDNA6NC62 111 aa16.62■□□□□ 0.25
NEK9-203ENST00000553945 PFDN1O60925 122 aa16.62■□□□□ 0.25
NEK9-203ENST00000553945 GPX1P07203 203 aa16.62■□□□□ 0.25
NEK9-203ENST00000553945 CRISP2P16562 243 aa16.62■□□□□ 0.25
NEK9-203ENST00000553945 RNASE4P34096 147 aaKnown RBP16.62■□□□□ 0.25
NEK9-203ENST00000553945 CD300CQ08708 224 aa16.62■□□□□ 0.25
NEK9-203ENST00000553945 BTN1A1Q13410 526 aa16.62■□□□□ 0.25
NEK9-203ENST00000553945 TMUB2Q71RG4 321 aa16.62■□□□□ 0.25
NEK9-203ENST00000553945 TCTE3Q8IZS6 198 aa16.62■□□□□ 0.25
NEK9-203ENST00000553945 SUN5Q8TC36 379 aa16.62■□□□□ 0.25
NEK9-203ENST00000553945 PLA2G2EQ9NZK7 142 aa16.62■□□□□ 0.25
NEK9-203ENST00000553945 ALMS1Q8TCU4 4167 aa16.61■□□□□ 0.25
NEK9-203ENST00000553945 KLLNB2CW77 178 aa16.61■□□□□ 0.25
NEK9-203ENST00000553945 C16orf74Q96GX8 76 aa16.61■□□□□ 0.25
NEK9-203ENST00000553945 RYR2Q92736 4967 aa16.61■□□□□ 0.25
NEK9-203ENST00000553945 NMBP08949 121 aa16.6■□□□□ 0.25
NEK9-203ENST00000553945 GOLT1AQ6ZVE7 132 aa16.6■□□□□ 0.25
NEK9-203ENST00000553945 CCDC28AQ8IWP9 274 aa16.6■□□□□ 0.25
NEK9-203ENST00000553945 DNAH1Q9P2D7 4330 aa16.59■□□□□ 0.25
NEK9-203ENST00000553945 DEFB131BA0A096LNP1 70 aa16.59■□□□□ 0.25
NEK9-203ENST00000553945 IGLL5B9A064 214 aa16.59■□□□□ 0.25
NEK9-203ENST00000553945 GNG5P63218 68 aa16.59■□□□□ 0.25
NEK9-203ENST00000553945 ZFAND2AQ8N6M9 145 aa16.59■□□□□ 0.25
NEK9-203ENST00000553945 PLAC8L1A1L4L8 177 aa16.58■□□□□ 0.24
NEK9-203ENST00000553945 FGF8P55075 233 aaPredicted RBP16.58■□□□□ 0.24
NEK9-203ENST00000553945 PRR9Q5T870 116 aa16.58■□□□□ 0.24
NEK9-203ENST00000553945 ZNF493Q6ZR52 646 aa16.58■□□□□ 0.24
NEK9-203ENST00000553945 ARL6IP6Q8N6S5 226 aa16.58■□□□□ 0.24
NEK9-203ENST00000553945 TMEM263Q8WUH6 116 aaKnown RBP16.58■□□□□ 0.24
NEK9-203ENST00000553945 PYGO2Q9BRQ0 406 aa16.58■□□□□ 0.24
NEK9-203ENST00000553945 TRBV7-9A0A0J9YWB2 115 aa16.57■□□□□ 0.24
NEK9-203ENST00000553945 LYRM9A8MSI8 78 aa16.57■□□□□ 0.24
NEK9-203ENST00000553945 ZNF324O75467 553 aaPredicted RBP16.57■□□□□ 0.24
NEK9-203ENST00000553945 SEC11BP0C7V7 166 aa16.57■□□□□ 0.24
NEK9-203ENST00000553945 DAD1P61803 113 aa16.57■□□□□ 0.24
NEK9-203ENST00000553945 EIF5AP63241 154 aaKnown RBP16.57■□□□□ 0.24
NEK9-203ENST00000553945 AKAP14Q86UN6 197 aa16.57■□□□□ 0.24
NEK9-203ENST00000553945 RNASE8Q8TDE3 154 aaKnown RBP16.57■□□□□ 0.24
NEK9-203ENST00000553945 TMPRSS5Q9H3S3 457 aa16.57■□□□□ 0.24
NEK9-203ENST00000553945 MAP1LC3B2A6NCE7 125 aa16.56■□□□□ 0.24
NEK9-203ENST00000553945 SUMO1P63165 101 aaKnown RBP16.56■□□□□ 0.24
NEK9-203ENST00000553945 C5orf17Q8NAS9 161 aa16.56■□□□□ 0.24
NEK9-203ENST00000553945 MAP1LC3BQ9GZQ8 125 aa16.56■□□□□ 0.24
NEK9-203ENST00000553945 GGTLC3B5MD39 225 aa16.55■□□□□ 0.24
NEK9-203ENST00000553945 C1QBP02746 253 aa16.55■□□□□ 0.24
NEK9-203ENST00000553945 HTN3P15516 51 aa16.55■□□□□ 0.24
NEK9-203ENST00000553945 FHITP49789 147 aa16.55■□□□□ 0.24
NEK9-203ENST00000553945 TMED6Q8WW62 240 aa16.55■□□□□ 0.24
NEK9-203ENST00000553945 TIMM8BQ9Y5J9 83 aaPredicted RBP16.55■□□□□ 0.24
NEK9-203ENST00000553945 UMAD1C9J7I0 102 aa16.54■□□□□ 0.24
NEK9-203ENST00000553945 DEFB130BP0DP73 79 aa16.54■□□□□ 0.24
NEK9-203ENST00000553945 DEFB130AP0DP74 79 aa16.54■□□□□ 0.24
NEK9-203ENST00000553945 TPT1P13693 172 aaKnown RBP16.54■□□□□ 0.24
NEK9-203ENST00000553945 UBE2G2P60604 165 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms