RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 CMTM2Q8TAZ6 248 aa6.74□□□□□ -1.33
CHD8-206ENST00000553870 TMED6Q8WW62 240 aa6.74□□□□□ -1.33
CHD8-206ENST00000553870 ZNF471Q9BX82 626 aaPredicted RBP6.74□□□□□ -1.33
CHD8-206ENST00000553870 AGPAT4-IT1Q9H0P7 198 aa6.74□□□□□ -1.33
CHD8-206ENST00000553870 LENEPQ9Y5L5 61 aa6.74□□□□□ -1.33
CHD8-206ENST00000553870 IGHV3OR16-12A0A075B7B8 117 aa6.73□□□□□ -1.33
CHD8-206ENST00000553870 SERTM2A0A1B0GWG4 89 aa6.73□□□□□ -1.33
CHD8-206ENST00000553870 CXorf65A6NEN9 183 aa6.73□□□□□ -1.33
CHD8-206ENST00000553870 DIRC3C9JPN6 131 aa6.73□□□□□ -1.33
CHD8-206ENST00000553870 H7BYZ3 331 aa6.73□□□□□ -1.33
CHD8-206ENST00000553870 TPT1P13693 172 aaKnown RBP6.73□□□□□ -1.33
CHD8-206ENST00000553870 CRISP2P16562 243 aa6.73□□□□□ -1.33
CHD8-206ENST00000553870 TAS2R60P59551 318 aa6.73□□□□□ -1.33
CHD8-206ENST00000553870 EIF5AL1Q6IS14 154 aaKnown RBP6.73□□□□□ -1.33
CHD8-206ENST00000553870 DPPA3Q6W0C5 159 aa6.73□□□□□ -1.33
CHD8-206ENST00000553870 BAP18Q8IXM2 172 aa6.73□□□□□ -1.33
CHD8-206ENST00000553870 STOML3Q8TAV4 291 aa6.73□□□□□ -1.33
CHD8-206ENST00000553870 FAM19A4Q96LR4 140 aa6.73□□□□□ -1.33
CHD8-206ENST00000553870 LINC01587Q99440 93 aa6.73□□□□□ -1.33
CHD8-206ENST00000553870 NKX6-2Q9C056 277 aaPredicted RBP6.73□□□□□ -1.33
CHD8-206ENST00000553870 ZNF492Q9P255 531 aa6.73□□□□□ -1.33
CHD8-206ENST00000553870 DNAH7Q8WXX0 4024 aa6.72□□□□□ -1.33
CHD8-206ENST00000553870 TRAV12-2A0A075B6T6 113 aa6.72□□□□□ -1.33
CHD8-206ENST00000553870 A0A1W2PRE2 83 aa6.72□□□□□ -1.33
CHD8-206ENST00000553870 NUPR2A6NF83 97 aa6.72□□□□□ -1.33
CHD8-206ENST00000553870 KLLNB2CW77 178 aa6.72□□□□□ -1.33
CHD8-206ENST00000553870 C11orf94C9JXX5 98 aa6.72□□□□□ -1.33
CHD8-206ENST00000553870 DEFB4AO15263 64 aa6.72□□□□□ -1.33
CHD8-206ENST00000553870 HMGB3O15347 200 aaKnown RBP6.72□□□□□ -1.33
CHD8-206ENST00000553870 SPART-AS1P0CW21 52 aa6.72□□□□□ -1.33
CHD8-206ENST00000553870 ZNF138P52744 262 aa6.72□□□□□ -1.33
CHD8-206ENST00000553870 ERCC8Q13216 396 aa6.72□□□□□ -1.33
CHD8-206ENST00000553870 LGALSLQ3ZCW2 172 aaPredicted RBP6.72□□□□□ -1.33
CHD8-206ENST00000553870 ZNF493Q6ZR52 646 aa6.72□□□□□ -1.33
CHD8-206ENST00000553870 NIPSNAP3BQ9BS92 247 aa6.72□□□□□ -1.33
CHD8-206ENST00000553870 KLK5Q9Y337 293 aaPredicted RBP6.72□□□□□ -1.33
CHD8-206ENST00000553870 LOC102723971A0A1B0GUV8 181 aa6.71□□□□□ -1.34
CHD8-206ENST00000553870 FBLL1A6NHQ2 334 aaKnown RBP6.71□□□□□ -1.34
CHD8-206ENST00000553870 K7EQM0 130 aa6.71□□□□□ -1.34
CHD8-206ENST00000553870 EIF3GO75821 320 aaKnown RBP eCLIP6.71□□□□□ -1.34
CHD8-206ENST00000553870 GPX1P07203 203 aa6.71□□□□□ -1.34
CHD8-206ENST00000553870 RAB5CP51148 216 aa6.71□□□□□ -1.34
CHD8-206ENST00000553870 ZNF726P1Q15940 193 aa6.71□□□□□ -1.34
CHD8-206ENST00000553870 ZFAND6Q6FIF0 208 aa6.71□□□□□ -1.34
CHD8-206ENST00000553870 CEMP1Q6PRD7 247 aaPredicted RBP6.71□□□□□ -1.34
CHD8-206ENST00000553870 CCDC28AQ8IWP9 274 aa6.71□□□□□ -1.34
CHD8-206ENST00000553870 C5orf17Q8NAS9 161 aa6.71□□□□□ -1.34
CHD8-206ENST00000553870 MBD3L1Q8WWY6 194 aa6.71□□□□□ -1.34
CHD8-206ENST00000553870 VGLL1Q99990 258 aa6.71□□□□□ -1.34
CHD8-206ENST00000553870 PYGO2Q9BRQ0 406 aa6.71□□□□□ -1.34
CHD8-206ENST00000553870 LINC00467Q9BRT7 94 aa6.71□□□□□ -1.34
CHD8-206ENST00000553870 IGKV2-40A0A087WW87 121 aaPredicted RBP6.7□□□□□ -1.34
CHD8-206ENST00000553870 C7orf71A4D174 169 aa6.7□□□□□ -1.34
CHD8-206ENST00000553870 MAP1LC3B2A6NCE7 125 aa6.7□□□□□ -1.34
CHD8-206ENST00000553870 ZNF324O75467 553 aaPredicted RBP6.7□□□□□ -1.34
CHD8-206ENST00000553870 IGKV2D-40P01614 121 aaPredicted RBP6.7□□□□□ -1.34
CHD8-206ENST00000553870 TCTAP57738 103 aa6.7□□□□□ -1.34
CHD8-206ENST00000553870 NANOS2P60321 138 aaKnown RBP6.7□□□□□ -1.34
CHD8-206ENST00000553870 SUMO1P63165 101 aaKnown RBP6.7□□□□□ -1.34
CHD8-206ENST00000553870 GFI1BQ5VTD9 330 aa6.7□□□□□ -1.34
CHD8-206ENST00000553870 SSX7Q7RTT5 188 aa6.7□□□□□ -1.34
CHD8-206ENST00000553870 SLC51BQ86UW2 128 aa6.7□□□□□ -1.34
CHD8-206ENST00000553870 PHLDA1Q8WV24 401 aaPredicted RBP6.7□□□□□ -1.34
CHD8-206ENST00000553870 MAP1LC3BQ9GZQ8 125 aa6.7□□□□□ -1.34
CHD8-206ENST00000553870 DKK2Q9UBU2 259 aa6.7□□□□□ -1.34
CHD8-206ENST00000553870 EPDR1Q9UM22 224 aa6.7□□□□□ -1.34
CHD8-206ENST00000553870 ARL2-SNX15V9GYD0 113 aa6.7□□□□□ -1.34
CHD8-206ENST00000553870 hCG_2014768A0A024R1R8 64 aa6.69□□□□□ -1.34
CHD8-206ENST00000553870 TRAV12-3A0A0B4J271 114 aa6.69□□□□□ -1.34
CHD8-206ENST00000553870 LYRM9A8MSI8 78 aa6.69□□□□□ -1.34
CHD8-206ENST00000553870 ZNF705GA8MUZ8 300 aaPredicted RBP6.69□□□□□ -1.34
CHD8-206ENST00000553870 TCRAP04437 139 aa6.69□□□□□ -1.34
CHD8-206ENST00000553870 PRB4P10163 310 aaPredicted RBP6.69□□□□□ -1.34
CHD8-206ENST00000553870 RNASE4P34096 147 aaKnown RBP6.69□□□□□ -1.34
CHD8-206ENST00000553870 FHITP49789 147 aa6.69□□□□□ -1.34
CHD8-206ENST00000553870 PPT1P50897 306 aa6.69□□□□□ -1.34
CHD8-206ENST00000553870 KIR3DS1Q14943 382 aa6.69□□□□□ -1.34
CHD8-206ENST00000553870 C12orf74Q32Q52 190 aa6.69□□□□□ -1.34
CHD8-206ENST00000553870 ZFAND2AQ8N6M9 145 aa6.69□□□□□ -1.34
CHD8-206ENST00000553870 TMEM263Q8WUH6 116 aaKnown RBP6.69□□□□□ -1.34
CHD8-206ENST00000553870 SFT2D1Q8WV19 159 aa6.69□□□□□ -1.34
CHD8-206ENST00000553870 C16orf74Q96GX8 76 aa6.69□□□□□ -1.34
CHD8-206ENST00000553870 TCEAL7Q9BRU2 100 aa6.69□□□□□ -1.34
CHD8-206ENST00000553870 YTHDF2Q9Y5A9 579 aaKnown RBP6.69□□□□□ -1.34
CHD8-206ENST00000553870 TRAV10A0A0B4J240 114 aa6.68□□□□□ -1.34
CHD8-206ENST00000553870 TRAV1-1A0A0B4J248 108 aa6.68□□□□□ -1.34
CHD8-206ENST00000553870 F6UZH7 168 aa6.68□□□□□ -1.34
CHD8-206ENST00000553870 TEX46H3BTG2 121 aa6.68□□□□□ -1.34
CHD8-206ENST00000553870 H2AFB1P0C5Y9 115 aa6.68□□□□□ -1.34
CHD8-206ENST00000553870 EMP1P54849 157 aa6.68□□□□□ -1.34
CHD8-206ENST00000553870 PMS2P11Q13670 270 aa6.68□□□□□ -1.34
CHD8-206ENST00000553870 ANXA2RQ3ZCQ2 193 aa6.68□□□□□ -1.34
CHD8-206ENST00000553870 ZFP69Q49AA0 526 aa6.68□□□□□ -1.34
CHD8-206ENST00000553870 FAM222AQ5U5X8 452 aa6.68□□□□□ -1.34
CHD8-206ENST00000553870 GOLT1AQ6ZVE7 132 aa6.68□□□□□ -1.34
CHD8-206ENST00000553870 IQCF2Q8IXL9 164 aa6.68□□□□□ -1.34
CHD8-206ENST00000553870 FAM213BQ8TBF2 198 aa6.68□□□□□ -1.34
CHD8-206ENST00000553870 RNASE8Q8TDE3 154 aaKnown RBP6.68□□□□□ -1.34
CHD8-206ENST00000553870 C2CD4CQ8TF44 421 aa6.68□□□□□ -1.34
CHD8-206ENST00000553870 HIST1H2BAQ96A08 127 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms