RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 PLCXD2Q0VAA5 305 aa1.42□□□□□ -2.18
SYNE2-210ENST00000553455 DHRS4L2Q6PKH6 230 aa1.42□□□□□ -2.18
SYNE2-210ENST00000553455 PXT1Q8NFP0 134 aa1.42□□□□□ -2.18
SYNE2-210ENST00000553455 PRADC1Q9BSG0 188 aa1.42□□□□□ -2.18
SYNE2-210ENST00000553455 TMEM126AQ9H061 195 aa1.42□□□□□ -2.18
SYNE2-210ENST00000553455 BCL2L10Q9HD36 194 aa1.42□□□□□ -2.18
SYNE2-210ENST00000553455 FBN3Q75N90 2809 aa1.41□□□□□ -2.18
SYNE2-210ENST00000553455 TNRC6BQ9UPQ9 1833 aaKnown RBP1.41□□□□□ -2.18
SYNE2-210ENST00000553455 LOC110117498A0A087WWA1 95 aa1.41□□□□□ -2.18
SYNE2-210ENST00000553455 HMGB3O15347 200 aaKnown RBP1.41□□□□□ -2.18
SYNE2-210ENST00000553455 HYPMO75409 117 aa1.41□□□□□ -2.18
SYNE2-210ENST00000553455 SRP14P37108 136 aaKnown RBP1.41□□□□□ -2.18
SYNE2-210ENST00000553455 SNRPFP62306 86 aaKnown RBP1.41□□□□□ -2.18
SYNE2-210ENST00000553455 DYNLT1P63172 113 aa1.41□□□□□ -2.18
SYNE2-210ENST00000553455 Q8IYB0 196 aa1.41□□□□□ -2.18
SYNE2-210ENST00000553455 OR2T10Q8NGZ9 312 aa1.41□□□□□ -2.18
SYNE2-210ENST00000553455 KRTAP4-1Q9BYQ7 146 aa1.41□□□□□ -2.18
SYNE2-210ENST00000553455 MYO7AQ13402 2215 aa1.41□□□□□ -2.18
SYNE2-210ENST00000553455 C5orf42Q9H799 3197 aa1.41□□□□□ -2.18
SYNE2-210ENST00000553455 MYO15AQ9UKN7 3530 aa1.41□□□□□ -2.18
SYNE2-210ENST00000553455 DENND4CQ5VZ89 1909 aa1.4□□□□□ -2.18
SYNE2-210ENST00000553455 ZNF292O60281 2723 aa1.4□□□□□ -2.18
SYNE2-210ENST00000553455 A0A087WX48 190 aa1.4□□□□□ -2.19
SYNE2-210ENST00000553455 GEMIN2O14893 280 aaKnown RBP1.4□□□□□ -2.19
SYNE2-210ENST00000553455 PROSCO94903 275 aa1.4□□□□□ -2.19
SYNE2-210ENST00000553455 KRR1Q13601 381 aaKnown RBP1.4□□□□□ -2.19
SYNE2-210ENST00000553455 HACD4Q5VWC8 232 aa1.4□□□□□ -2.19
SYNE2-210ENST00000553455 ZNF720Q7Z2F6 126 aa1.4□□□□□ -2.19
SYNE2-210ENST00000553455 DEFB123Q8N688 67 aa1.4□□□□□ -2.19
SYNE2-210ENST00000553455 LINC00301Q8NCQ3 95 aa1.4□□□□□ -2.19
SYNE2-210ENST00000553455 ODF3Q96PU9 254 aa1.4□□□□□ -2.19
SYNE2-210ENST00000553455 IMUPQ9GZP8 106 aa1.4□□□□□ -2.19
SYNE2-210ENST00000553455 USP34Q70CQ2 3546 aa1.4□□□□□ -2.19
SYNE2-210ENST00000553455 OBSL1O75147 1896 aa1.39□□□□□ -2.19
SYNE2-210ENST00000553455 PIEZO1Q92508 2521 aa1.39□□□□□ -2.19
SYNE2-210ENST00000553455 TCHHQ07283 1943 aa1.39□□□□□ -2.19
SYNE2-210ENST00000553455 SIP14410 1827 aa1.39□□□□□ -2.19
SYNE2-210ENST00000553455 TRBV6-8A0A0A6YYG3 113 aa1.39□□□□□ -2.19
SYNE2-210ENST00000553455 PVALEFA0A1B0GWK0 134 aa1.39□□□□□ -2.19
SYNE2-210ENST00000553455 LOC730098B7Z3J9 87 aa1.39□□□□□ -2.19
SYNE2-210ENST00000553455 CD52P31358 61 aa1.39□□□□□ -2.19
SYNE2-210ENST00000553455 C1orf137Q5JT78 98 aa1.39□□□□□ -2.19
SYNE2-210ENST00000553455 SLC30A7Q8NEW0 376 aa1.39□□□□□ -2.19
SYNE2-210ENST00000553455 ZNF418Q8TF45 676 aaPredicted RBP1.39□□□□□ -2.19
SYNE2-210ENST00000553455 CEP19Q96LK0 163 aa1.39□□□□□ -2.19
SYNE2-210ENST00000553455 LXNQ9BS40 222 aa1.39□□□□□ -2.19
SYNE2-210ENST00000553455 KLK9Q9UKQ9 250 aa1.39□□□□□ -2.19
SYNE2-210ENST00000553455 DNAH14Q0VDD8 3507 aa1.39□□□□□ -2.19
SYNE2-210ENST00000553455 TANC1Q9C0D5 1861 aa1.39□□□□□ -2.19
SYNE2-210ENST00000553455 FRYLO94915 3013 aa1.39□□□□□ -2.19
SYNE2-210ENST00000553455 WDFY4Q6ZS81 3184 aa1.39□□□□□ -2.19
SYNE2-210ENST00000553455 CACNA1HO95180 2353 aa1.39□□□□□ -2.19
SYNE2-210ENST00000553455 CEP192Q8TEP8 1941 aa1.38□□□□□ -2.19
SYNE2-210ENST00000553455 NCOA6Q14686 2063 aaPredicted RBP1.38□□□□□ -2.19
SYNE2-210ENST00000553455 SCN8AQ9UQD0 1980 aa1.38□□□□□ -2.19
SYNE2-210ENST00000553455 FAM92AA1XBS5 289 aa1.38□□□□□ -2.19
SYNE2-210ENST00000553455 ARL5CA6NH57 179 aa1.38□□□□□ -2.19
SYNE2-210ENST00000553455 M0R378 163 aa1.38□□□□□ -2.19
SYNE2-210ENST00000553455 TAX1BP3O14907 124 aa1.38□□□□□ -2.19
SYNE2-210ENST00000553455 GADD45GO95257 159 aa1.38□□□□□ -2.19
SYNE2-210ENST00000553455 IFNA7P01567 189 aa1.38□□□□□ -2.19
SYNE2-210ENST00000553455 BASP1P80723 227 aaKnown RBP1.38□□□□□ -2.19
SYNE2-210ENST00000553455 SOSTDC1Q6X4U4 206 aa1.38□□□□□ -2.19
SYNE2-210ENST00000553455 PDZD9Q8IXQ8 264 aa1.38□□□□□ -2.19
SYNE2-210ENST00000553455 EXOC3-AS1Q8N2X6 119 aa1.38□□□□□ -2.19
SYNE2-210ENST00000553455 FAM19A2Q8N3H0 131 aa1.38□□□□□ -2.19
SYNE2-210ENST00000553455 RIF1Q5UIP0 2472 aaKnown RBP1.38□□□□□ -2.19
SYNE2-210ENST00000553455 F5P12259 2224 aa1.38□□□□□ -2.19
SYNE2-210ENST00000553455 PDCD11Q14690 1871 aaKnown RBP1.37□□□□□ -2.19
SYNE2-210ENST00000553455 VPS13AQ96RL7 3174 aa1.37□□□□□ -2.19
SYNE2-210ENST00000553455 CITO14578 2027 aa1.37□□□□□ -2.19
SYNE2-210ENST00000553455 ATG2AQ2TAZ0 1938 aa1.37□□□□□ -2.19
SYNE2-210ENST00000553455 LAMA5O15230 3695 aa1.37□□□□□ -2.19
SYNE2-210ENST00000553455 H3BQV1 296 aa1.37□□□□□ -2.19
SYNE2-210ENST00000553455 PPP1R2P41236 205 aa1.37□□□□□ -2.19
SYNE2-210ENST00000553455 NCALDP61601 193 aa1.37□□□□□ -2.19
SYNE2-210ENST00000553455 C22orf39Q6P5X5 142 aa1.37□□□□□ -2.19
SYNE2-210ENST00000553455 CDC26Q8NHZ8 85 aa1.37□□□□□ -2.19
SYNE2-210ENST00000553455 C6orf62Q9GZU0 229 aaPredicted RBP1.37□□□□□ -2.19
SYNE2-210ENST00000553455 C14orf132Q9NPU4 83 aa1.37□□□□□ -2.19
SYNE2-210ENST00000553455 ACER3Q9NUN7 267 aa1.37□□□□□ -2.19
SYNE2-210ENST00000553455 ANK1P16157 1881 aa1.37□□□□□ -2.19
SYNE2-210ENST00000553455 PLXNA4Q9HCM2 1894 aa1.37□□□□□ -2.19
SYNE2-210ENST00000553455 SCN3AQ9NY46 2000 aa1.37□□□□□ -2.19
SYNE2-210ENST00000553455 ZDBF2Q9HCK1 2354 aa1.36□□□□□ -2.19
SYNE2-210ENST00000553455 IGKV2D-26A0A0A0MRZ7 120 aa1.36□□□□□ -2.19
SYNE2-210ENST00000553455 TRGV10A0A0A0MS01 117 aa1.36□□□□□ -2.19
SYNE2-210ENST00000553455 CXorf51AA0A1B0GTR3 108 aa1.36□□□□□ -2.19
SYNE2-210ENST00000553455 C10orf142B7Z368 130 aa1.36□□□□□ -2.19
SYNE2-210ENST00000553455 HMGA1P17096 107 aaKnown RBP1.36□□□□□ -2.19
SYNE2-210ENST00000553455 FANCMQ8IYD8 2048 aa1.36□□□□□ -2.19
SYNE2-210ENST00000553455 TEX47Q8TBZ9 253 aa1.36□□□□□ -2.19
SYNE2-210ENST00000553455 OBSCN-AS1Q96MR7 158 aa1.36□□□□□ -2.19
SYNE2-210ENST00000553455 YPEL2Q96QA6 119 aa1.36□□□□□ -2.19
SYNE2-210ENST00000553455 CCDC94Q9BW85 323 aaPredicted RBP1.36□□□□□ -2.19
SYNE2-210ENST00000553455 MED29Q9NX70 200 aa1.36□□□□□ -2.19
SYNE2-210ENST00000553455 STOML2Q9UJZ1 356 aa1.36□□□□□ -2.19
SYNE2-210ENST00000553455 PRNDQ9UKY0 176 aa1.36□□□□□ -2.19
SYNE2-210ENST00000553455 PYCARDQ9ULZ3 195 aa1.36□□□□□ -2.19
SYNE2-210ENST00000553455 ZFP30Q9Y2G7 519 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms