RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 DAZAP1Q96EP5 407 aaKnown RBP8.49□□□□□ -1.05
VPS29-211ENST00000553128 AGPAT4-IT1Q9H0P7 198 aa8.49□□□□□ -1.05
VPS29-211ENST00000553128 IGHV1OR15-1A0A075B7D0 117 aa8.48□□□□□ -1.05
VPS29-211ENST00000553128 DUXBA0A1W2PPF3 345 aa8.48□□□□□ -1.05
VPS29-211ENST00000553128 K7EPK0 472 aa8.48□□□□□ -1.05
VPS29-211ENST00000553128 RGS13O14921 159 aa8.48□□□□□ -1.05
VPS29-211ENST00000553128 IGLV2-8P01709 118 aa8.48□□□□□ -1.05
VPS29-211ENST00000553128 ORM1P02763 201 aa8.48□□□□□ -1.05
VPS29-211ENST00000553128 Q8N3U1 123 aa8.48□□□□□ -1.05
VPS29-211ENST00000553128 OR10P1Q8NGE3 313 aa8.48□□□□□ -1.05
VPS29-211ENST00000553128 TXNDC17Q9BRA2 123 aa8.48□□□□□ -1.05
VPS29-211ENST00000553128 NAA50Q9GZZ1 169 aaKnown RBP8.48□□□□□ -1.05
VPS29-211ENST00000553128 RABL2BQ9UNT1 228 aa8.48□□□□□ -1.05
VPS29-211ENST00000553128 ANKRD20A5PA0PJZ0 165 aa8.47□□□□□ -1.05
VPS29-211ENST00000553128 GPX1P07203 203 aa8.47□□□□□ -1.05
VPS29-211ENST00000553128 HOXB5P09067 269 aa8.47□□□□□ -1.05
VPS29-211ENST00000553128 ASIPP42127 132 aa8.47□□□□□ -1.05
VPS29-211ENST00000553128 POLR2GP62487 172 aaKnown RBP eCLIP8.47□□□□□ -1.05
VPS29-211ENST00000553128 C4orf46Q504U0 113 aa8.47□□□□□ -1.05
VPS29-211ENST00000553128 S100A7AQ86SG5 101 aa8.47□□□□□ -1.05
VPS29-211ENST00000553128 ZFAND2AQ8N6M9 145 aa8.47□□□□□ -1.05
VPS29-211ENST00000553128 OR10G4Q8NGN3 311 aa8.47□□□□□ -1.05
VPS29-211ENST00000553128 MCUBQ9NWR8 336 aa8.47□□□□□ -1.05
VPS29-211ENST00000553128 PSENENQ9NZ42 101 aa8.47□□□□□ -1.05
VPS29-211ENST00000553128 SCP2D1Q9UJQ7 156 aa8.47□□□□□ -1.05
VPS29-211ENST00000553128 CTDSP2O14595 271 aa8.46□□□□□ -1.06
VPS29-211ENST00000553128 RS1O15537 224 aa8.46□□□□□ -1.06
VPS29-211ENST00000553128 COX7A2P2O60397 106 aa8.46□□□□□ -1.06
VPS29-211ENST00000553128 CRISP2P16562 243 aa8.46□□□□□ -1.06
VPS29-211ENST00000553128 MRPS10P82664 201 aaKnown RBP8.46□□□□□ -1.06
VPS29-211ENST00000553128 AP3S1Q92572 193 aa8.46□□□□□ -1.06
VPS29-211ENST00000553128 SCGB3A2Q96PL1 93 aa8.46□□□□□ -1.06
VPS29-211ENST00000553128 ARPC5LQ9BPX5 153 aa8.46□□□□□ -1.06
VPS29-211ENST00000553128 SLC25A31Q9H0C2 315 aa8.46□□□□□ -1.06
VPS29-211ENST00000553128 NPVFQ9HCQ7 196 aa8.46□□□□□ -1.06
VPS29-211ENST00000553128 DNAJC4Q9NNZ3 241 aa8.46□□□□□ -1.06
VPS29-211ENST00000553128 C9JCJ5 164 aa8.45□□□□□ -1.06
VPS29-211ENST00000553128 GOSR2O14653 212 aa8.45□□□□□ -1.06
VPS29-211ENST00000553128 AGPAT2O15120 278 aa8.45□□□□□ -1.06
VPS29-211ENST00000553128 METTL15P1P0C7V9 234 aa8.45□□□□□ -1.06
VPS29-211ENST00000553128 VAMP1P23763 118 aa8.45□□□□□ -1.06
VPS29-211ENST00000553128 PPT1P50897 306 aa8.45□□□□□ -1.06
VPS29-211ENST00000553128 TIRAPP58753 221 aa8.45□□□□□ -1.06
VPS29-211ENST00000553128 ARL16Q0P5N6 197 aa8.45□□□□□ -1.06
VPS29-211ENST00000553128 ZNF846Q147U1 533 aa8.45□□□□□ -1.06
VPS29-211ENST00000553128 MUC21Q5SSG8 566 aa8.45□□□□□ -1.06
VPS29-211ENST00000553128 PXDC1Q5TGL8 231 aa8.45□□□□□ -1.06
VPS29-211ENST00000553128 NHLRC2Q8NBF2 726 aa8.45□□□□□ -1.06
VPS29-211ENST00000553128 RAB2BQ8WUD1 216 aa8.45□□□□□ -1.06
VPS29-211ENST00000553128 BAALCQ8WXS3 180 aa8.45□□□□□ -1.06
VPS29-211ENST00000553128 LINC00477Q96M19 166 aa8.45□□□□□ -1.06
VPS29-211ENST00000553128 CCDC59Q9P031 241 aaKnown RBP8.45□□□□□ -1.06
VPS29-211ENST00000553128 RNF24Q9Y225 148 aa8.45□□□□□ -1.06
VPS29-211ENST00000553128 IGKV2-40A0A087WW87 121 aaPredicted RBP8.44□□□□□ -1.06
VPS29-211ENST00000553128 IGHV3-16A0A0C4DH30 117 aa8.44□□□□□ -1.06
VPS29-211ENST00000553128 RGS5O15539 181 aa8.44□□□□□ -1.06
VPS29-211ENST00000553128 SSSCA1O60232 199 aa8.44□□□□□ -1.06
VPS29-211ENST00000553128 NDUFB4O95168 129 aa8.44□□□□□ -1.06
VPS29-211ENST00000553128 IGKV2D-40P01614 121 aaPredicted RBP8.44□□□□□ -1.06
VPS29-211ENST00000553128 RPL37AP61513 92 aaKnown RBP8.44□□□□□ -1.06
VPS29-211ENST00000553128 ID3Q02535 119 aa8.44□□□□□ -1.06
VPS29-211ENST00000553128 OR10J3Q5JRS4 329 aa8.44□□□□□ -1.06
VPS29-211ENST00000553128 C10orf113Q5VZT2 155 aa8.44□□□□□ -1.06
VPS29-211ENST00000553128 TMEM14EPQ6UXP3 125 aa8.44□□□□□ -1.06
VPS29-211ENST00000553128 C9orf47Q6ZRZ4 202 aa8.44□□□□□ -1.06
VPS29-211ENST00000553128 RASL10AQ92737 203 aa8.44□□□□□ -1.06
VPS29-211ENST00000553128 MRPL53Q96EL3 112 aaKnown RBP8.44□□□□□ -1.06
VPS29-211ENST00000553128 MGST2Q99735 147 aa8.44□□□□□ -1.06
VPS29-211ENST00000553128 A0A087WXM4 84 aa8.43□□□□□ -1.06
VPS29-211ENST00000553128 CTDSPLO15194 276 aa8.43□□□□□ -1.06
VPS29-211ENST00000553128 ATP6V1G2O95670 118 aa8.43□□□□□ -1.06
VPS29-211ENST00000553128 TNFSF8P32971 234 aa8.43□□□□□ -1.06
VPS29-211ENST00000553128 IL18Q14116 193 aa8.43□□□□□ -1.06
VPS29-211ENST00000553128 CTF1Q16619 201 aa8.43□□□□□ -1.06
VPS29-211ENST00000553128 GUK1Q16774 197 aa8.43□□□□□ -1.06
VPS29-211ENST00000553128 TMEM128Q5BJH2 165 aa8.43□□□□□ -1.06
VPS29-211ENST00000553128 ZNF546Q86UE3 836 aa8.43□□□□□ -1.06
VPS29-211ENST00000553128 EXOC3-AS1Q8N2X6 119 aa8.43□□□□□ -1.06
VPS29-211ENST00000553128 SOSTQ9BQB4 213 aa8.43□□□□□ -1.06
VPS29-211ENST00000553128 TM2D2Q9BX73 214 aa8.43□□□□□ -1.06
VPS29-211ENST00000553128 TRBV19A0A075B6N1 114 aa8.42□□□□□ -1.06
VPS29-211ENST00000553128 TRAV8-6A0A0B4J262 113 aa8.42□□□□□ -1.06
VPS29-211ENST00000553128 RBFOX3A6NFN3 312 aa8.42□□□□□ -1.06
VPS29-211ENST00000553128 PPP1R1AQ13522 171 aa8.42□□□□□ -1.06
VPS29-211ENST00000553128 LAGE3Q14657 143 aa8.42□□□□□ -1.06
VPS29-211ENST00000553128 VCX3AQ9NNX9 186 aa8.42□□□□□ -1.06
VPS29-211ENST00000553128 MGAT4CQ9UBM8 478 aa8.42□□□□□ -1.06
VPS29-211ENST00000553128 TRAV4A0A0B4J268 109 aa8.41□□□□□ -1.06
VPS29-211ENST00000553128 PIGBOS1A0A0B4J2F0 54 aa8.41□□□□□ -1.06
VPS29-211ENST00000553128 FNDC10F2Z333 226 aa8.41□□□□□ -1.06
VPS29-211ENST00000553128 ZNF253O75346 499 aa8.41□□□□□ -1.06
VPS29-211ENST00000553128 SFT2D2O95562 160 aa8.41□□□□□ -1.06
VPS29-211ENST00000553128 NMBP08949 121 aa8.41□□□□□ -1.06
VPS29-211ENST00000553128 OR4C5Q8NGB2 326 aa8.41□□□□□ -1.06
VPS29-211ENST00000553128 Q8TAT8 98 aa8.41□□□□□ -1.06
VPS29-211ENST00000553128 SMIM8Q96KF7 97 aa8.41□□□□□ -1.06
VPS29-211ENST00000553128 DNAJC30Q96LL9 226 aa8.41□□□□□ -1.06
VPS29-211ENST00000553128 GATA1P15976 413 aaPredicted RBP8.4□□□□□ -1.06
VPS29-211ENST00000553128 ASAH1Q13510 395 aa8.4□□□□□ -1.06
VPS29-211ENST00000553128 ODF1Q14990 250 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms