RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 PSMG3Q9BT73 122 aaPredicted RBP8.44□□□□□ -1.06
CKAP4-202ENST00000552828 SLC25A2Q9BXI2 301 aa8.44□□□□□ -1.06
CKAP4-202ENST00000552828 ZNF331Q9NQX6 463 aaPredicted RBP8.44□□□□□ -1.06
CKAP4-202ENST00000552828 HSPG2P98160 4391 aa8.44□□□□□ -1.06
CKAP4-202ENST00000552828 A0A0J9YX75 114 aa8.43□□□□□ -1.06
CKAP4-202ENST00000552828 F6UB75 175 aa8.43□□□□□ -1.06
CKAP4-202ENST00000552828 H3BTX0 84 aa8.43□□□□□ -1.06
CKAP4-202ENST00000552828 IGKV3-20P01619 116 aa8.43□□□□□ -1.06
CKAP4-202ENST00000552828 ATP6V0CP27449 155 aa8.43□□□□□ -1.06
CKAP4-202ENST00000552828 TAS2R45P59539 299 aa8.43□□□□□ -1.06
CKAP4-202ENST00000552828 BTN1A1Q13410 526 aa8.43□□□□□ -1.06
CKAP4-202ENST00000552828 RNF212Q495C1 297 aa8.43□□□□□ -1.06
CKAP4-202ENST00000552828 RPL7L1Q6DKI1 246 aaKnown RBP8.43□□□□□ -1.06
CKAP4-202ENST00000552828 OR4B1Q8NGF8 309 aa8.43□□□□□ -1.06
CKAP4-202ENST00000552828 OR2G3Q8NGZ4 309 aa8.43□□□□□ -1.06
CKAP4-202ENST00000552828 GNPNAT1Q96EK6 184 aaPredicted RBP8.43□□□□□ -1.06
CKAP4-202ENST00000552828 FAM167A-AS1Q96KT0 104 aa8.43□□□□□ -1.06
CKAP4-202ENST00000552828 OR51M1Q9H341 326 aa8.43□□□□□ -1.06
CKAP4-202ENST00000552828 ZNF586Q9NXT0 402 aa8.43□□□□□ -1.06
CKAP4-202ENST00000552828 DKK2Q9UBU2 259 aa8.43□□□□□ -1.06
CKAP4-202ENST00000552828 RFNGQ9Y644 331 aa8.43□□□□□ -1.06
CKAP4-202ENST00000552828 TRBV19A0A075B6N1 114 aa8.42□□□□□ -1.06
CKAP4-202ENST00000552828 TEX48A0A1B0GUV7 120 aa8.42□□□□□ -1.06
CKAP4-202ENST00000552828 A0A1W2PPV4 95 aa8.42□□□□□ -1.06
CKAP4-202ENST00000552828 TMEM218A2RU14 115 aa8.42□□□□□ -1.06
CKAP4-202ENST00000552828 ZNF253O75346 499 aa8.42□□□□□ -1.06
CKAP4-202ENST00000552828 DUSP14O95147 198 aaKnown RBP8.42□□□□□ -1.06
CKAP4-202ENST00000552828 MBP02144 154 aa8.42□□□□□ -1.06
CKAP4-202ENST00000552828 PYYP10082 97 aa8.42□□□□□ -1.06
CKAP4-202ENST00000552828 BLOC1S1P78537 153 aa8.42□□□□□ -1.06
CKAP4-202ENST00000552828 SERF2P84101 59 aa8.42□□□□□ -1.06
CKAP4-202ENST00000552828 PSG9Q00887 426 aa8.42□□□□□ -1.06
CKAP4-202ENST00000552828 PDE6HQ13956 83 aa8.42□□□□□ -1.06
CKAP4-202ENST00000552828 RPUSD4Q96CM3 377 aaKnown RBP8.42□□□□□ -1.06
CKAP4-202ENST00000552828 PAXXQ9BUH6 204 aa8.42□□□□□ -1.06
CKAP4-202ENST00000552828 CARHSP1Q9Y2V2 147 aaKnown RBP8.42□□□□□ -1.06
CKAP4-202ENST00000552828 SLC17A3O00476 420 aa8.41□□□□□ -1.06
CKAP4-202ENST00000552828 OR7C2O60412 319 aa8.41□□□□□ -1.06
CKAP4-202ENST00000552828 APOC3P02656 99 aa8.41□□□□□ -1.06
CKAP4-202ENST00000552828 NBEAP1P0C6P0 100 aa8.41□□□□□ -1.06
CKAP4-202ENST00000552828 RAB2AP61019 212 aa8.41□□□□□ -1.06
CKAP4-202ENST00000552828 KHDC3LQ587J8 217 aa8.41□□□□□ -1.06
CKAP4-202ENST00000552828 FAM122CQ6P4D5 195 aa8.41□□□□□ -1.06
CKAP4-202ENST00000552828 OR10G4Q8NGN3 311 aa8.41□□□□□ -1.06
CKAP4-202ENST00000552828 OR10G9Q8NGN4 311 aa8.41□□□□□ -1.06
CKAP4-202ENST00000552828 OR10G7Q8NGN6 311 aa8.41□□□□□ -1.06
CKAP4-202ENST00000552828 BLNKQ8WV28 456 aa8.41□□□□□ -1.06
CKAP4-202ENST00000552828 LRP1BQ9NZR2 4599 aa8.41□□□□□ -1.06
CKAP4-202ENST00000552828 H2AFB1P0C5Y9 115 aa8.4□□□□□ -1.06
CKAP4-202ENST00000552828 OR10J4P0C629 311 aa8.4□□□□□ -1.06
CKAP4-202ENST00000552828 SULT1A2P50226 295 aa8.4□□□□□ -1.06
CKAP4-202ENST00000552828 CNN1P51911 297 aaKnown RBP8.4□□□□□ -1.06
CKAP4-202ENST00000552828 EMP1P54849 157 aa8.4□□□□□ -1.06
CKAP4-202ENST00000552828 HIST1H1AQ02539 215 aaPredicted RBP8.4□□□□□ -1.06
CKAP4-202ENST00000552828 SMUG1Q53HV7 270 aa8.4□□□□□ -1.06
CKAP4-202ENST00000552828 FAM222AQ5U5X8 452 aa8.4□□□□□ -1.06
CKAP4-202ENST00000552828 SVBPQ8N300 66 aa8.4□□□□□ -1.06
CKAP4-202ENST00000552828 OR8A1Q8NGG7 326 aa8.4□□□□□ -1.06
CKAP4-202ENST00000552828 TMED6Q8WW62 240 aa8.4□□□□□ -1.06
CKAP4-202ENST00000552828 FXYD5Q96DB9 178 aa8.4□□□□□ -1.06
CKAP4-202ENST00000552828 NIPSNAP3BQ9BS92 247 aa8.4□□□□□ -1.06
CKAP4-202ENST00000552828 NKX6-2Q9C056 277 aaPredicted RBP8.4□□□□□ -1.06
CKAP4-202ENST00000552828 SH3BGRL3Q9H299 93 aa8.4□□□□□ -1.06
CKAP4-202ENST00000552828 AAMDCQ9H7C9 122 aa8.4□□□□□ -1.06
CKAP4-202ENST00000552828 IGLV2-18A0A075B6J9 118 aa8.39□□□□□ -1.07
CKAP4-202ENST00000552828 A8MTW9 85 aa8.39□□□□□ -1.07
CKAP4-202ENST00000552828 NDUFB4O95168 129 aa8.39□□□□□ -1.07
CKAP4-202ENST00000552828 FXYD7P58549 80 aa8.39□□□□□ -1.07
CKAP4-202ENST00000552828 UBE2L3P68036 154 aaKnown RBP8.39□□□□□ -1.07
CKAP4-202ENST00000552828 SOHLH1Q5JUK2 328 aa8.39□□□□□ -1.07
CKAP4-202ENST00000552828 PQLC2Q6ZP29 291 aa8.39□□□□□ -1.07
CKAP4-202ENST00000552828 UBE2DNLQ8IWF7 75 aa8.39□□□□□ -1.07
CKAP4-202ENST00000552828 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.39□□□□□ -1.07
CKAP4-202ENST00000552828 SEC11CQ9BY50 192 aa8.39□□□□□ -1.07
CKAP4-202ENST00000552828 KRTAP4-5Q9BYR2 181 aa8.39□□□□□ -1.07
CKAP4-202ENST00000552828 PPP1R14DQ9NXH3 145 aa8.39□□□□□ -1.07
CKAP4-202ENST00000552828 PRELID1Q9Y255 219 aa8.39□□□□□ -1.07
CKAP4-202ENST00000552828 MUC4Q99102 2169 aa8.39□□□□□ -1.07
CKAP4-202ENST00000552828 IGHV3OR16-12A0A075B7B8 117 aa8.38□□□□□ -1.07
CKAP4-202ENST00000552828 SEC11BP0C7V7 166 aa8.38□□□□□ -1.07
CKAP4-202ENST00000552828 CDC34P49427 236 aaPredicted RBP8.38□□□□□ -1.07
CKAP4-202ENST00000552828 FAM3BP58499 235 aaPredicted RBP8.38□□□□□ -1.07
CKAP4-202ENST00000552828 ATRAIDQ6UW56 229 aa8.38□□□□□ -1.07
CKAP4-202ENST00000552828 C1orf158Q8N1D5 194 aa8.38□□□□□ -1.07
CKAP4-202ENST00000552828 CLRN3Q8NCR9 226 aa8.38□□□□□ -1.07
CKAP4-202ENST00000552828 OR10J6PQ8NGY7 276 aa8.38□□□□□ -1.07
CKAP4-202ENST00000552828 LYPD6BQ8NI32 183 aa8.38□□□□□ -1.07
CKAP4-202ENST00000552828 MRPL53Q96EL3 112 aaKnown RBP8.38□□□□□ -1.07
CKAP4-202ENST00000552828 ZNF503Q96F45 646 aa8.38□□□□□ -1.07
CKAP4-202ENST00000552828 ACTR3CQ9C0K3 210 aaPredicted RBP8.38□□□□□ -1.07
CKAP4-202ENST00000552828 SLC35B3Q9H1N7 401 aa8.38□□□□□ -1.07
CKAP4-202ENST00000552828 PLA2G2EQ9NZK7 142 aa8.38□□□□□ -1.07
CKAP4-202ENST00000552828 PRAC2D3DTV9 90 aa8.37□□□□□ -1.07
CKAP4-202ENST00000552828 HMGB3O15347 200 aaKnown RBP8.37□□□□□ -1.07
CKAP4-202ENST00000552828 EIF3GO75821 320 aaKnown RBP eCLIP8.37□□□□□ -1.07
CKAP4-202ENST00000552828 SNAPINO95295 136 aa8.37□□□□□ -1.07
CKAP4-202ENST00000552828 RAB5CP51148 216 aa8.37□□□□□ -1.07
CKAP4-202ENST00000552828 RANP62826 216 aaKnown RBP8.37□□□□□ -1.07
CKAP4-202ENST00000552828 ICAM4Q14773 271 aa8.37□□□□□ -1.07
CKAP4-202ENST00000552828 C1orf134Q5TEV5 83 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 173.3 ms