RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 CT45A10P0DMU9 189 aa10.87□□□□□ -0.67
BRF1-220ENST00000552127 DEFB130BP0DP73 79 aa10.87□□□□□ -0.67
BRF1-220ENST00000552127 DEFB130AP0DP74 79 aa10.87□□□□□ -0.67
BRF1-220ENST00000552127 TMEM88Q6PEY1 159 aa10.87□□□□□ -0.67
BRF1-220ENST00000552127 ZNF493Q6ZR52 646 aa10.87□□□□□ -0.67
BRF1-220ENST00000552127 RNASE8Q8TDE3 154 aaKnown RBP10.87□□□□□ -0.67
BRF1-220ENST00000552127 AAMDCQ9H7C9 122 aa10.87□□□□□ -0.67
BRF1-220ENST00000552127 MBD2Q9UBB5 411 aa10.87□□□□□ -0.67
BRF1-220ENST00000552127 J3KRW8 73 aa10.86□□□□□ -0.67
BRF1-220ENST00000552127 RPL12P30050 165 aaKnown RBP10.86□□□□□ -0.67
BRF1-220ENST00000552127 EXOC3-AS1Q8N2X6 119 aa10.86□□□□□ -0.67
BRF1-220ENST00000552127 SMIM3Q9BZL3 60 aa10.86□□□□□ -0.67
BRF1-220ENST00000552127 FUT9Q9Y231 359 aa10.86□□□□□ -0.67
BRF1-220ENST00000552127 ALG5Q9Y673 324 aa10.86□□□□□ -0.67
BRF1-220ENST00000552127 PTTG1O95997 202 aa10.85□□□□□ -0.67
BRF1-220ENST00000552127 INAFM2P0DMQ5 153 aa10.85□□□□□ -0.67
BRF1-220ENST00000552127 FCN2Q15485 313 aa10.85□□□□□ -0.67
BRF1-220ENST00000552127 C1orf134Q5TEV5 83 aa10.85□□□□□ -0.67
BRF1-220ENST00000552127 UBE2DNLQ8IWF7 75 aa10.85□□□□□ -0.67
BRF1-220ENST00000552127 FXYD5Q96DB9 178 aa10.85□□□□□ -0.67
BRF1-220ENST00000552127 OR51M1Q9H341 326 aa10.85□□□□□ -0.67
BRF1-220ENST00000552127 TIMM8BQ9Y5J9 83 aaPredicted RBP10.85□□□□□ -0.67
BRF1-220ENST00000552127 SRRM2Q9UQ35 2752 aaKnown RBP10.85□□□□□ -0.67
BRF1-220ENST00000552127 TRAV12-3A0A0B4J271 114 aa10.84□□□□□ -0.67
BRF1-220ENST00000552127 IFNA5P01569 189 aa10.84□□□□□ -0.67
BRF1-220ENST00000552127 NBEAP1P0C6P0 100 aa10.84□□□□□ -0.67
BRF1-220ENST00000552127 TNP2Q05952 138 aa10.84□□□□□ -0.67
BRF1-220ENST00000552127 ERCC8Q13216 396 aa10.84□□□□□ -0.67
BRF1-220ENST00000552127 ICAM4Q14773 271 aa10.84□□□□□ -0.67
BRF1-220ENST00000552127 FFAR4Q5NUL3 377 aa10.84□□□□□ -0.67
BRF1-220ENST00000552127 CCDC28AQ8IWP9 274 aa10.84□□□□□ -0.67
BRF1-220ENST00000552127 C15orf53Q8NAA6 179 aa10.84□□□□□ -0.67
BRF1-220ENST00000552127 PAXXQ9BUH6 204 aa10.84□□□□□ -0.67
BRF1-220ENST00000552127 EPM2AB3EWF7 344 aa10.83□□□□□ -0.68
BRF1-220ENST00000552127 OR7C2O60412 319 aa10.83□□□□□ -0.68
BRF1-220ENST00000552127 SLC25A5P05141 298 aaKnown RBP10.83□□□□□ -0.68
BRF1-220ENST00000552127 ATP5G1P05496 136 aa10.83□□□□□ -0.68
BRF1-220ENST00000552127 OR10J4P0C629 311 aa10.83□□□□□ -0.68
BRF1-220ENST00000552127 ATP5G3P48201 142 aa10.83□□□□□ -0.68
BRF1-220ENST00000552127 FAM122CQ6P4D5 195 aa10.83□□□□□ -0.68
BRF1-220ENST00000552127 SCGB1C1Q8TD33 95 aa10.83□□□□□ -0.68
BRF1-220ENST00000552127 PHYHIPLQ96FC7 376 aa10.83□□□□□ -0.68
BRF1-220ENST00000552127 FAM19A4Q96LR4 140 aa10.83□□□□□ -0.68
BRF1-220ENST00000552127 NOP10Q9NPE3 64 aaKnown RBP10.83□□□□□ -0.68
BRF1-220ENST00000552127 IGKV2-40A0A087WW87 121 aaPredicted RBP10.82□□□□□ -0.68
BRF1-220ENST00000552127 C7orf71A4D174 169 aa10.82□□□□□ -0.68
BRF1-220ENST00000552127 CBY3A6NI87 242 aa10.82□□□□□ -0.68
BRF1-220ENST00000552127 KLLNB2CW77 178 aa10.82□□□□□ -0.68
BRF1-220ENST00000552127 F5H768 121 aa10.82□□□□□ -0.68
BRF1-220ENST00000552127 IGKV2D-40P01614 121 aaPredicted RBP10.82□□□□□ -0.68
BRF1-220ENST00000552127 C9orf47Q6ZRZ4 202 aa10.82□□□□□ -0.68
BRF1-220ENST00000552127 RNF141Q8WVD5 230 aa10.82□□□□□ -0.68
BRF1-220ENST00000552127 LINC00477Q96M19 166 aa10.82□□□□□ -0.68
BRF1-220ENST00000552127 PYGO2Q9BRQ0 406 aa10.82□□□□□ -0.68
BRF1-220ENST00000552127 AGPAT4-IT1Q9H0P7 198 aa10.82□□□□□ -0.68
BRF1-220ENST00000552127 SNURFLB1AK76 121 aa10.81□□□□□ -0.68
BRF1-220ENST00000552127 UBE2L3P68036 154 aaKnown RBP10.81□□□□□ -0.68
BRF1-220ENST00000552127 RNF212Q495C1 297 aa10.81□□□□□ -0.68
BRF1-220ENST00000552127 KHDC3LQ587J8 217 aa10.81□□□□□ -0.68
BRF1-220ENST00000552127 TMEM78Q5T7P6 136 aa10.81□□□□□ -0.68
BRF1-220ENST00000552127 LINC00612Q8N6U2 182 aa10.81□□□□□ -0.68
BRF1-220ENST00000552127 ZNF503Q96F45 646 aa10.81□□□□□ -0.68
BRF1-220ENST00000552127 WFDC1Q9HC57 220 aa10.81□□□□□ -0.68
BRF1-220ENST00000552127 CRISP2P16562 243 aa10.8□□□□□ -0.68
BRF1-220ENST00000552127 TAS2R45P59539 299 aa10.8□□□□□ -0.68
BRF1-220ENST00000552127 BTN1A1Q13410 526 aa10.8□□□□□ -0.68
BRF1-220ENST00000552127 VGLL1Q99990 258 aa10.8□□□□□ -0.68
BRF1-220ENST00000552127 MED28Q9H204 178 aa10.8□□□□□ -0.68
BRF1-220ENST00000552127 NMBP08949 121 aa10.79□□□□□ -0.68
BRF1-220ENST00000552127 CD300CQ08708 224 aa10.79□□□□□ -0.68
BRF1-220ENST00000552127 LINC00467Q9BRT7 94 aa10.79□□□□□ -0.68
BRF1-220ENST00000552127 ZNF492Q9P255 531 aa10.79□□□□□ -0.68
BRF1-220ENST00000552127 ZNF324O75467 553 aaPredicted RBP10.78□□□□□ -0.68
BRF1-220ENST00000552127 GPX1P07203 203 aa10.78□□□□□ -0.68
BRF1-220ENST00000552127 RNASE4P34096 147 aaKnown RBP10.78□□□□□ -0.68
BRF1-220ENST00000552127 CSN1S1P47710 185 aa10.78□□□□□ -0.68
BRF1-220ENST00000552127 RANP62826 216 aaKnown RBP10.78□□□□□ -0.68
BRF1-220ENST00000552127 PRR9Q5T870 116 aa10.78□□□□□ -0.68
BRF1-220ENST00000552127 LYPD1Q8N2G4 141 aa10.78□□□□□ -0.68
BRF1-220ENST00000552127 ZFAND2AQ8N6M9 145 aa10.78□□□□□ -0.68
BRF1-220ENST00000552127 ZNF680Q8NEM1 530 aa10.78□□□□□ -0.68
BRF1-220ENST00000552127 Q9H3A6 140 aa10.78□□□□□ -0.68
BRF1-220ENST00000552127 GAGE12BA1L429 117 aa10.77□□□□□ -0.69
BRF1-220ENST00000552127 GAGE7O76087 117 aa10.77□□□□□ -0.69
BRF1-220ENST00000552127 NUDT3O95989 172 aa10.77□□□□□ -0.69
BRF1-220ENST00000552127 GAGE12FP0CL80 117 aa10.77□□□□□ -0.69
BRF1-220ENST00000552127 GAGE12GP0CL81 117 aa10.77□□□□□ -0.69
BRF1-220ENST00000552127 GAGE12IP0CL82 117 aa10.77□□□□□ -0.69
BRF1-220ENST00000552127 M6PRP20645 277 aa10.77□□□□□ -0.69
BRF1-220ENST00000552127 ZNF138P52744 262 aa10.77□□□□□ -0.69
BRF1-220ENST00000552127 FAM3BP58499 235 aaPredicted RBP10.77□□□□□ -0.69
BRF1-220ENST00000552127 DAZ2Q13117 558 aaKnown RBP10.77□□□□□ -0.69
BRF1-220ENST00000552127 ACOT6Q3I5F7 207 aaPredicted RBP10.77□□□□□ -0.69
BRF1-220ENST00000552127 EIF4E3Q8N5X7 224 aaKnown RBP10.77□□□□□ -0.69
BRF1-220ENST00000552127 C11orf72Q8NBR9 251 aa10.77□□□□□ -0.69
BRF1-220ENST00000552127 Q8TAT8 98 aa10.77□□□□□ -0.69
BRF1-220ENST00000552127 FAT1Q14517 4588 aa10.77□□□□□ -0.69
BRF1-220ENST00000552127 TRBV7-9A0A0J9YWB2 115 aa10.76□□□□□ -0.69
BRF1-220ENST00000552127 RBAKDNA6NC62 111 aa10.76□□□□□ -0.69
BRF1-220ENST00000552127 EIF3GO75821 320 aaKnown RBP eCLIP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms