RNA–Protein interactions for RNA: ENST00000551787.5

BRF1-219, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-219ENST00000551787 KHDC3LQ587J8 217 aa11.84□□□□□ -0.51
BRF1-219ENST00000551787 C9orf47Q6ZRZ4 202 aa11.84□□□□□ -0.51
BRF1-219ENST00000551787 INO80EQ8NBZ0 244 aaPredicted RBP11.84□□□□□ -0.51
BRF1-219ENST00000551787 OR2T35Q8NGX2 323 aa11.84□□□□□ -0.51
BRF1-219ENST00000551787 C16orf74Q96GX8 76 aa11.84□□□□□ -0.51
BRF1-219ENST00000551787 HYLS1Q96M11 299 aa11.84□□□□□ -0.51
BRF1-219ENST00000551787 BTN1A1Q13410 526 aa11.83□□□□□ -0.52
BRF1-219ENST00000551787 TMEM78Q5T7P6 136 aa11.83□□□□□ -0.52
BRF1-219ENST00000551787 CCDC28AQ8IWP9 274 aa11.83□□□□□ -0.52
BRF1-219ENST00000551787 OR10G4Q8NGN3 311 aa11.83□□□□□ -0.52
BRF1-219ENST00000551787 OR10G9Q8NGN4 311 aa11.83□□□□□ -0.52
BRF1-219ENST00000551787 OR10G7Q8NGN6 311 aa11.83□□□□□ -0.52
BRF1-219ENST00000551787 RNASE8Q8TDE3 154 aaKnown RBP11.83□□□□□ -0.52
BRF1-219ENST00000551787 FAM19A4Q96LR4 140 aa11.83□□□□□ -0.52
BRF1-219ENST00000551787 C20orf144Q9BQM9 153 aa11.83□□□□□ -0.52
BRF1-219ENST00000551787 Q9H3A6 140 aa11.83□□□□□ -0.52
BRF1-219ENST00000551787 C7orf71A4D174 169 aa11.82□□□□□ -0.52
BRF1-219ENST00000551787 SLC25A5P05141 298 aaKnown RBP11.82□□□□□ -0.52
BRF1-219ENST00000551787 GPX1P07203 203 aa11.82□□□□□ -0.52
BRF1-219ENST00000551787 ATP6V0CP27449 155 aa11.82□□□□□ -0.52
BRF1-219ENST00000551787 ZNF266Q14584 549 aa11.82□□□□□ -0.52
BRF1-219ENST00000551787 TMEM88Q6PEY1 159 aa11.82□□□□□ -0.52
BRF1-219ENST00000551787 Q6ZQT7 251 aa11.82□□□□□ -0.52
BRF1-219ENST00000551787 ZNF493Q6ZR52 646 aa11.82□□□□□ -0.52
BRF1-219ENST00000551787 Q8TAT8 98 aa11.82□□□□□ -0.52
BRF1-219ENST00000551787 TMEM263Q8WUH6 116 aaKnown RBP11.82□□□□□ -0.52
BRF1-219ENST00000551787 SH3BGRL3Q9H299 93 aa11.82□□□□□ -0.52
BRF1-219ENST00000551787 TIMM8BQ9Y5J9 83 aaPredicted RBP11.82□□□□□ -0.52
BRF1-219ENST00000551787 RNF222A6NCQ9 220 aa11.81□□□□□ -0.52
BRF1-219ENST00000551787 KLLNB2CW77 178 aa11.81□□□□□ -0.52
BRF1-219ENST00000551787 CSN1S1P47710 185 aa11.81□□□□□ -0.52
BRF1-219ENST00000551787 PRR9Q5T870 116 aa11.81□□□□□ -0.52
BRF1-219ENST00000551787 ASB13Q8WXK3 278 aa11.81□□□□□ -0.52
BRF1-219ENST00000551787 ZNF492Q9P255 531 aa11.81□□□□□ -0.52
BRF1-219ENST00000551787 F5H768 121 aa11.8□□□□□ -0.52
BRF1-219ENST00000551787 G3V3Q6 166 aa11.8□□□□□ -0.52
BRF1-219ENST00000551787 SMLR1H3BR10 107 aa11.8□□□□□ -0.52
BRF1-219ENST00000551787 ZNF324O75467 553 aaPredicted RBP11.8□□□□□ -0.52
BRF1-219ENST00000551787 ZNF138P52744 262 aa11.8□□□□□ -0.52
BRF1-219ENST00000551787 RPL7L1Q6DKI1 246 aaKnown RBP11.8□□□□□ -0.52
BRF1-219ENST00000551787 LYPD1Q8N2G4 141 aa11.8□□□□□ -0.52
BRF1-219ENST00000551787 ZFAND2AQ8N6M9 145 aa11.8□□□□□ -0.52
BRF1-219ENST00000551787 PYGO2Q9BRQ0 406 aa11.8□□□□□ -0.52
BRF1-219ENST00000551787 RPH3ALQ9UNE2 315 aa11.8□□□□□ -0.52
BRF1-219ENST00000551787 TNFSF18Q9UNG2 199 aa11.8□□□□□ -0.52
BRF1-219ENST00000551787 DNAH10Q8IVF4 4471 aa11.8□□□□□ -0.52
BRF1-219ENST00000551787 PGPA6NDG6 321 aa11.79□□□□□ -0.52
BRF1-219ENST00000551787 CBY3A6NI87 242 aa11.79□□□□□ -0.52
BRF1-219ENST00000551787 DIRC3C9JPN6 131 aa11.79□□□□□ -0.52
BRF1-219ENST00000551787 CRISP2P16562 243 aa11.79□□□□□ -0.52
BRF1-219ENST00000551787 OR2G3Q8NGZ4 309 aa11.79□□□□□ -0.52
BRF1-219ENST00000551787 RAB24Q969Q5 203 aa11.79□□□□□ -0.52
BRF1-219ENST00000551787 OTORQ9NRC9 128 aa11.79□□□□□ -0.52
BRF1-219ENST00000551787 GAGE12BA1L429 117 aa11.78□□□□□ -0.52
BRF1-219ENST00000551787 SNURFLB1AK76 121 aa11.78□□□□□ -0.52
BRF1-219ENST00000551787 GAGE7O76087 117 aa11.78□□□□□ -0.52
BRF1-219ENST00000551787 GAGE12FP0CL80 117 aa11.78□□□□□ -0.52
BRF1-219ENST00000551787 GAGE12GP0CL81 117 aa11.78□□□□□ -0.52
BRF1-219ENST00000551787 GAGE12IP0CL82 117 aa11.78□□□□□ -0.52
BRF1-219ENST00000551787 ARL14EPLP0DKL9 152 aa11.78□□□□□ -0.52
BRF1-219ENST00000551787 P0DMU3 169 aa11.78□□□□□ -0.52
BRF1-219ENST00000551787 FAM231AP0DMU4 169 aa11.78□□□□□ -0.52
BRF1-219ENST00000551787 FAM231CP0DMU5 169 aa11.78□□□□□ -0.52
BRF1-219ENST00000551787 CDC34P49427 236 aaPredicted RBP11.78□□□□□ -0.52
BRF1-219ENST00000551787 Q6ZNX1 250 aa11.78□□□□□ -0.52
BRF1-219ENST00000551787 PQLC2Q6ZP29 291 aa11.78□□□□□ -0.52
BRF1-219ENST00000551787 FAM210BQ96KR6 192 aa11.78□□□□□ -0.52
BRF1-219ENST00000551787 PSMG3Q9BT73 122 aaPredicted RBP11.78□□□□□ -0.52
BRF1-219ENST00000551787 GSN-AS1Q9NRJ2 163 aa11.78□□□□□ -0.52
BRF1-219ENST00000551787 DNAH6Q9C0G6 4158 aa11.78□□□□□ -0.52
BRF1-219ENST00000551787 FRAS1Q86XX4 4008 aa11.77□□□□□ -0.53
BRF1-219ENST00000551787 ARPC5O15511 151 aa11.77□□□□□ -0.53
BRF1-219ENST00000551787 ATP5G1P05496 136 aa11.77□□□□□ -0.53
BRF1-219ENST00000551787 ATP5G3P48201 142 aa11.77□□□□□ -0.53
BRF1-219ENST00000551787 POM121L12Q8N7R1 296 aa11.77□□□□□ -0.53
BRF1-219ENST00000551787 CMTM2Q8TAZ6 248 aa11.77□□□□□ -0.53
BRF1-219ENST00000551787 RXFP4Q8TDU9 374 aa11.77□□□□□ -0.53
BRF1-219ENST00000551787 TP53TG3Q9ULZ0 132 aa11.77□□□□□ -0.53
BRF1-219ENST00000551787 BORCS7-ASMTA0A0B4J1R7 106 aa11.76□□□□□ -0.53
BRF1-219ENST00000551787 NMBP08949 121 aa11.76□□□□□ -0.53
BRF1-219ENST00000551787 SERF2P84101 59 aa11.76□□□□□ -0.53
BRF1-219ENST00000551787 RBAKDNA6NC62 111 aa11.75□□□□□ -0.53
BRF1-219ENST00000551787 M0R2N4 97 aa11.75□□□□□ -0.53
BRF1-219ENST00000551787 RGS13O14921 159 aa11.75□□□□□ -0.53
BRF1-219ENST00000551787 MBP02144 154 aa11.75□□□□□ -0.53
BRF1-219ENST00000551787 STAG3L2P0CL84 134 aa11.75□□□□□ -0.53
BRF1-219ENST00000551787 STAG3L3P0CL85 134 aa11.75□□□□□ -0.53
BRF1-219ENST00000551787 GCHFRP30047 84 aa11.75□□□□□ -0.53
BRF1-219ENST00000551787 GNG5P63218 68 aa11.75□□□□□ -0.53
BRF1-219ENST00000551787 OR5I1Q13606 314 aa11.75□□□□□ -0.53
BRF1-219ENST00000551787 MUC21Q5SSG8 566 aa11.75□□□□□ -0.53
BRF1-219ENST00000551787 Q6ZTI0 123 aa11.75□□□□□ -0.53
BRF1-219ENST00000551787 GOLT1AQ6ZVE7 132 aa11.75□□□□□ -0.53
BRF1-219ENST00000551787 SSX7Q7RTT5 188 aa11.75□□□□□ -0.53
BRF1-219ENST00000551787 UBE2DNLQ8IWF7 75 aa11.75□□□□□ -0.53
BRF1-219ENST00000551787 EIF4E3Q8N5X7 224 aaKnown RBP11.75□□□□□ -0.53
BRF1-219ENST00000551787 ACTR3CQ9C0K3 210 aaPredicted RBP11.75□□□□□ -0.53
BRF1-219ENST00000551787 KLF12Q9Y4X4 402 aa11.75□□□□□ -0.53
BRF1-219ENST00000551787 IGHV1OR15-1A0A075B7D0 117 aa11.74□□□□□ -0.53
BRF1-219ENST00000551787 TRAV8-1A0A0A6YYK1 113 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms