RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 YTHDF2Q9Y5A9 579 aaKnown RBP15.67■□□□□ 0.1
NEK3-202ENST00000550841 CT45A10P0DMU9 189 aa15.66■□□□□ 0.1
NEK3-202ENST00000550841 CDKN1BP46527 198 aa15.66■□□□□ 0.1
NEK3-202ENST00000550841 ERCC8Q13216 396 aa15.66■□□□□ 0.1
NEK3-202ENST00000550841 TCEAL7Q9BRU2 100 aa15.66■□□□□ 0.1
NEK3-202ENST00000550841 MANBALQ9NQG1 85 aa15.66■□□□□ 0.1
NEK3-202ENST00000550841 RPH3ALQ9UNE2 315 aa15.66■□□□□ 0.1
NEK3-202ENST00000550841 GGTLC3B5MD39 225 aa15.65■□□□□ 0.1
NEK3-202ENST00000550841 F6UZH7 168 aa15.65■□□□□ 0.1
NEK3-202ENST00000550841 PAGE4O60829 102 aa15.65■□□□□ 0.1
NEK3-202ENST00000550841 TCRAP04437 139 aa15.65■□□□□ 0.1
NEK3-202ENST00000550841 SPINK13Q1W4C9 94 aa15.65■□□□□ 0.1
NEK3-202ENST00000550841 TEX261Q6UWH6 196 aa15.65■□□□□ 0.1
NEK3-202ENST00000550841 GOLT1AQ6ZVE7 132 aa15.65■□□□□ 0.1
NEK3-202ENST00000550841 IGF2BP2-AS1Q96M15 143 aa15.65■□□□□ 0.1
NEK3-202ENST00000550841 VGLL1Q99990 258 aa15.65■□□□□ 0.1
NEK3-202ENST00000550841 TRBV7-9A0A0J9YWB2 115 aa15.64■□□□□ 0.09
NEK3-202ENST00000550841 FBLL1A6NHQ2 334 aaKnown RBP15.64■□□□□ 0.09
NEK3-202ENST00000550841 IFNA1P01562 189 aa15.64■□□□□ 0.09
NEK3-202ENST00000550841 NMBP08949 121 aa15.64■□□□□ 0.09
NEK3-202ENST00000550841 ZNF138P52744 262 aa15.64■□□□□ 0.09
NEK3-202ENST00000550841 PMS2P11Q13670 270 aa15.64■□□□□ 0.09
NEK3-202ENST00000550841 CSNK1G2-AS1Q8NCQ2 148 aa15.64■□□□□ 0.09
NEK3-202ENST00000550841 HIST1H2BAQ96A08 127 aa15.64■□□□□ 0.09
NEK3-202ENST00000550841 ATG101Q9BSB4 218 aa15.64■□□□□ 0.09
NEK3-202ENST00000550841 ZNF492Q9P255 531 aa15.64■□□□□ 0.09
NEK3-202ENST00000550841 GOLT1BQ9Y3E0 138 aa15.64■□□□□ 0.09
NEK3-202ENST00000550841 LENEPQ9Y5L5 61 aa15.64■□□□□ 0.09
NEK3-202ENST00000550841 U3KQK5 164 aa15.64■□□□□ 0.09
NEK3-202ENST00000550841 M0R2Z0 102 aa15.63■□□□□ 0.09
NEK3-202ENST00000550841 GNG5P63218 68 aa15.63■□□□□ 0.09
NEK3-202ENST00000550841 CCL20P78556 96 aa15.63■□□□□ 0.09
NEK3-202ENST00000550841 RARRES2Q99969 163 aa15.63■□□□□ 0.09
NEK3-202ENST00000550841 TXNDC17Q9BRA2 123 aa15.63■□□□□ 0.09
NEK3-202ENST00000550841 RETNQ9HD89 108 aa15.63■□□□□ 0.09
NEK3-202ENST00000550841 GNG13Q9P2W3 67 aa15.63■□□□□ 0.09
NEK3-202ENST00000550841 INSP01308 110 aa15.62■□□□□ 0.09
NEK3-202ENST00000550841 TAGLN2P37802 199 aaKnown RBP15.62■□□□□ 0.09
NEK3-202ENST00000550841 CCDC28AQ8IWP9 274 aa15.62■□□□□ 0.09
NEK3-202ENST00000550841 CYB561D1Q8N8Q1 229 aa15.62■□□□□ 0.09
NEK3-202ENST00000550841 ZNF680Q8NEM1 530 aa15.62■□□□□ 0.09
NEK3-202ENST00000550841 OR11H2Q8NH07 326 aa15.62■□□□□ 0.09
NEK3-202ENST00000550841 FAM19A4Q96LR4 140 aa15.61■□□□□ 0.09
NEK3-202ENST00000550841 C20orf144Q9BQM9 153 aa15.61■□□□□ 0.09
NEK3-202ENST00000550841 PEX7O00628 323 aa15.6■□□□□ 0.09
NEK3-202ENST00000550841 CRXO43186 299 aaPredicted RBP15.6■□□□□ 0.09
NEK3-202ENST00000550841 CRISP2P16562 243 aa15.6■□□□□ 0.09
NEK3-202ENST00000550841 TRAV12-2A0A075B6T6 113 aa15.59■□□□□ 0.09
NEK3-202ENST00000550841 SMIM9A6NGZ8 99 aa15.59■□□□□ 0.09
NEK3-202ENST00000550841 C11orf94C9JXX5 98 aa15.59■□□□□ 0.09
NEK3-202ENST00000550841 GPX1P07203 203 aa15.59■□□□□ 0.09
NEK3-202ENST00000550841 TMEM256Q8N2U0 113 aa15.59■□□□□ 0.09
NEK3-202ENST00000550841 TMEM75Q8N9X5 138 aa15.59■□□□□ 0.09
NEK3-202ENST00000550841 LYPD6BQ8NI32 183 aa15.59■□□□□ 0.09
NEK3-202ENST00000550841 NDFIP1Q9BT67 221 aa15.59■□□□□ 0.09
NEK3-202ENST00000550841 TMEM208Q9BTX3 173 aa15.59■□□□□ 0.09
NEK3-202ENST00000550841 ATP5G3P48201 142 aa15.58■□□□□ 0.08
NEK3-202ENST00000550841 ZNF705AQ6ZN79 300 aaPredicted RBP15.58■□□□□ 0.08
NEK3-202ENST00000550841 NEU1Q99519 415 aa15.58■□□□□ 0.08
NEK3-202ENST00000550841 PSG8Q9UQ74 426 aa15.58■□□□□ 0.08
NEK3-202ENST00000550841 DNAH9Q9NYC9 4486 aa15.58■□□□□ 0.08
NEK3-202ENST00000550841 KLLNB2CW77 178 aa15.57■□□□□ 0.08
NEK3-202ENST00000550841 MIFP14174 115 aa15.57■□□□□ 0.08
NEK3-202ENST00000550841 C1orf158Q8N1D5 194 aa15.57■□□□□ 0.08
NEK3-202ENST00000550841 Q8TAT8 98 aa15.57■□□□□ 0.08
NEK3-202ENST00000550841 WWC2-AS2Q96NR7 200 aa15.57■□□□□ 0.08
NEK3-202ENST00000550841 VAX2Q9UIW0 290 aa15.57■□□□□ 0.08
NEK3-202ENST00000550841 IGHV3OR16-12A0A075B7B8 117 aa15.56■□□□□ 0.08
NEK3-202ENST00000550841 C7orf71A4D174 169 aa15.56■□□□□ 0.08
NEK3-202ENST00000550841 J3KRW8 73 aa15.56■□□□□ 0.08
NEK3-202ENST00000550841 S100A9P06702 114 aaKnown RBP15.56■□□□□ 0.08
NEK3-202ENST00000550841 FLI1Q01543 452 aaPredicted RBP15.56■□□□□ 0.08
NEK3-202ENST00000550841 SAPCD1Q5SSQ6 148 aa15.56■□□□□ 0.08
NEK3-202ENST00000550841 GFI1BQ5VTD9 330 aa15.56■□□□□ 0.08
NEK3-202ENST00000550841 LINC01587Q99440 93 aa15.56■□□□□ 0.08
NEK3-202ENST00000550841 NIPSNAP3BQ9BS92 247 aa15.56■□□□□ 0.08
NEK3-202ENST00000550841 TRAV8-1A0A0A6YYK1 113 aa15.55■□□□□ 0.08
NEK3-202ENST00000550841 BCL2P10415 239 aa15.55■□□□□ 0.08
NEK3-202ENST00000550841 RNASE4P34096 147 aaKnown RBP15.55■□□□□ 0.08
NEK3-202ENST00000550841 ZFAND2AQ8N6M9 145 aa15.55■□□□□ 0.08
NEK3-202ENST00000550841 FMC1Q96HJ9 113 aa15.55■□□□□ 0.08
NEK3-202ENST00000550841 TREM1Q9NP99 234 aa15.55■□□□□ 0.08
NEK3-202ENST00000550841 H7BYZ3 331 aa15.54■□□□□ 0.08
NEK3-202ENST00000550841 PDE6DO43924 150 aa15.54■□□□□ 0.08
NEK3-202ENST00000550841 AKR1C3P42330 323 aa15.54■□□□□ 0.08
NEK3-202ENST00000550841 UBE2G1P62253 170 aa15.54■□□□□ 0.08
NEK3-202ENST00000550841 MEF2BQ02080 365 aaPredicted RBP15.54■□□□□ 0.08
NEK3-202ENST00000550841 PRNTQ86SH4 94 aa15.54■□□□□ 0.08
NEK3-202ENST00000550841 SGK494Q96LW2 274 aa15.54■□□□□ 0.08
NEK3-202ENST00000550841 KLF12Q9Y4X4 402 aa15.54■□□□□ 0.08
NEK3-202ENST00000550841 X6R8D5 127 aa15.54■□□□□ 0.08
NEK3-202ENST00000550841 TRAV12-3A0A0B4J271 114 aa15.53■□□□□ 0.08
NEK3-202ENST00000550841 IGLV2-11P01706 119 aa15.53■□□□□ 0.08
NEK3-202ENST00000550841 TAS2R60P59551 318 aa15.53■□□□□ 0.08
NEK3-202ENST00000550841 KIR3DS1Q14943 382 aa15.53■□□□□ 0.08
NEK3-202ENST00000550841 LINC00479Q96M42 142 aa15.53■□□□□ 0.08
NEK3-202ENST00000550841 ZFP30Q9Y2G7 519 aa15.53■□□□□ 0.08
NEK3-202ENST00000550841 TRAV34A0A0B4J273 112 aa15.52■□□□□ 0.08
NEK3-202ENST00000550841 TRBV6-1A0A0K0K1D8 114 aa15.52■□□□□ 0.08
NEK3-202ENST00000550841 RBFOX3A6NFN3 312 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms