RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 MEGF8Q7Z7M0 2845 aa4.27□□□□□ -1.73
SCAF11-213ENST00000550629 TRAV5A0A0B4J249 113 aa4.26□□□□□ -1.73
SCAF11-213ENST00000550629 MAP1LC3B2A6NCE7 125 aa4.26□□□□□ -1.73
SCAF11-213ENST00000550629 IZUMO1RA6ND01 250 aa4.26□□□□□ -1.73
SCAF11-213ENST00000550629 H3BQ15 152 aa4.26□□□□□ -1.73
SCAF11-213ENST00000550629 DNASE2O00115 360 aaPredicted RBP4.26□□□□□ -1.73
SCAF11-213ENST00000550629 SOCS3O14543 225 aa4.26□□□□□ -1.73
SCAF11-213ENST00000550629 NBEAP1P0C6P0 100 aa4.26□□□□□ -1.73
SCAF11-213ENST00000550629 ARL14EPLP0DKL9 152 aa4.26□□□□□ -1.73
SCAF11-213ENST00000550629 PPT1P50897 306 aa4.26□□□□□ -1.73
SCAF11-213ENST00000550629 UBE2L3P68036 154 aaKnown RBP4.26□□□□□ -1.73
SCAF11-213ENST00000550629 PSG9Q00887 426 aa4.26□□□□□ -1.73
SCAF11-213ENST00000550629 ZNF726P1Q15940 193 aa4.26□□□□□ -1.73
SCAF11-213ENST00000550629 GUCA2BQ16661 112 aa4.26□□□□□ -1.73
SCAF11-213ENST00000550629 SPATA31B1PQ5VZV4 182 aa4.26□□□□□ -1.73
SCAF11-213ENST00000550629 ZNF680Q8NEM1 530 aa4.26□□□□□ -1.73
SCAF11-213ENST00000550629 SFT2D1Q8WV19 159 aa4.26□□□□□ -1.73
SCAF11-213ENST00000550629 C17orf77Q96MU5 243 aa4.26□□□□□ -1.73
SCAF11-213ENST00000550629 SLC50A1Q9BRV3 221 aa4.26□□□□□ -1.73
SCAF11-213ENST00000550629 NKX6-2Q9C056 277 aaPredicted RBP4.26□□□□□ -1.73
SCAF11-213ENST00000550629 MAP1LC3BQ9GZQ8 125 aa4.26□□□□□ -1.73
SCAF11-213ENST00000550629 ZNF331Q9NQX6 463 aaPredicted RBP4.26□□□□□ -1.73
SCAF11-213ENST00000550629 ARL2-SNX15V9GYD0 113 aa4.26□□□□□ -1.73
SCAF11-213ENST00000550629 NOTCH1P46531 2555 aa4.26□□□□□ -1.73
SCAF11-213ENST00000550629 DNHD1Q96M86 4753 aa4.26□□□□□ -1.73
SCAF11-213ENST00000550629 IGHV4-28A0A0C4DH34 117 aa4.25□□□□□ -1.73
SCAF11-213ENST00000550629 ZNF705EA8MWA4 302 aaPredicted RBP4.25□□□□□ -1.73
SCAF11-213ENST00000550629 G3V4G9 280 aa4.25□□□□□ -1.73
SCAF11-213ENST00000550629 NDUFB4O95168 129 aa4.25□□□□□ -1.73
SCAF11-213ENST00000550629 HBE1P02100 147 aa4.25□□□□□ -1.73
SCAF11-213ENST00000550629 OR10J4P0C629 311 aa4.25□□□□□ -1.73
SCAF11-213ENST00000550629 PYYP10082 97 aa4.25□□□□□ -1.73
SCAF11-213ENST00000550629 GCHFRP30047 84 aa4.25□□□□□ -1.73
SCAF11-213ENST00000550629 TAGLN2P37802 199 aaKnown RBP4.25□□□□□ -1.73
SCAF11-213ENST00000550629 FHITP49789 147 aa4.25□□□□□ -1.73
SCAF11-213ENST00000550629 RPL36AP83881 106 aaKnown RBP4.25□□□□□ -1.73
SCAF11-213ENST00000550629 ALKAL2Q6UX46 152 aa4.25□□□□□ -1.73
SCAF11-213ENST00000550629 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.25□□□□□ -1.73
SCAF11-213ENST00000550629 Q6ZTC4 211 aa4.25□□□□□ -1.73
SCAF11-213ENST00000550629 ZNF767PQ75MW2 155 aa4.25□□□□□ -1.73
SCAF11-213ENST00000550629 GBGT1Q8N5D6 347 aa4.25□□□□□ -1.73
SCAF11-213ENST00000550629 MRPL53Q96EL3 112 aaKnown RBP4.25□□□□□ -1.73
SCAF11-213ENST00000550629 TCEAL7Q9BRU2 100 aa4.25□□□□□ -1.73
SCAF11-213ENST00000550629 ZNF586Q9NXT0 402 aa4.25□□□□□ -1.73
SCAF11-213ENST00000550629 UBQLN2Q9UHD9 624 aa4.25□□□□□ -1.73
SCAF11-213ENST00000550629 PRELID1Q9Y255 219 aa4.25□□□□□ -1.73
SCAF11-213ENST00000550629 IGKV3-7A0A075B6H7 116 aa4.24□□□□□ -1.73
SCAF11-213ENST00000550629 TRAV8-2A0A0B4J237 113 aa4.24□□□□□ -1.73
SCAF11-213ENST00000550629 A0A1B0GUV1 79 aa4.24□□□□□ -1.73
SCAF11-213ENST00000550629 A0A1W2PRE2 83 aa4.24□□□□□ -1.73
SCAF11-213ENST00000550629 A8MZ25 164 aa4.24□□□□□ -1.73
SCAF11-213ENST00000550629 OR11H12B2RN74 326 aa4.24□□□□□ -1.73
SCAF11-213ENST00000550629 CD81P60033 236 aa4.24□□□□□ -1.73
SCAF11-213ENST00000550629 FAM74A1Q5RGS3 127 aa4.24□□□□□ -1.73
SCAF11-213ENST00000550629 SSX7Q7RTT5 188 aa4.24□□□□□ -1.73
SCAF11-213ENST00000550629 LYPD6BQ8NI32 183 aa4.24□□□□□ -1.73
SCAF11-213ENST00000550629 RXFP4Q8TDU9 374 aa4.24□□□□□ -1.73
SCAF11-213ENST00000550629 TXNDC17Q9BRA2 123 aa4.24□□□□□ -1.73
SCAF11-213ENST00000550629 MANBALQ9NQG1 85 aa4.24□□□□□ -1.73
SCAF11-213ENST00000550629 OTORQ9NRC9 128 aa4.24□□□□□ -1.73
SCAF11-213ENST00000550629 TRRAPQ9Y4A5 3859 aa4.24□□□□□ -1.73
SCAF11-213ENST00000550629 IGLV5-52A0A0A0MRZ9 124 aa4.23□□□□□ -1.73
SCAF11-213ENST00000550629 SERTM2A0A1B0GWG4 89 aa4.23□□□□□ -1.73
SCAF11-213ENST00000550629 SLC17A3O00476 420 aa4.23□□□□□ -1.73
SCAF11-213ENST00000550629 HMGB3O15347 200 aaKnown RBP4.23□□□□□ -1.73
SCAF11-213ENST00000550629 IFNA1P01562 189 aa4.23□□□□□ -1.73
SCAF11-213ENST00000550629 ZNF688P0C7X2 276 aa4.23□□□□□ -1.73
SCAF11-213ENST00000550629 MT3P25713 68 aa4.23□□□□□ -1.73
SCAF11-213ENST00000550629 CSN1S1P47710 185 aa4.23□□□□□ -1.73
SCAF11-213ENST00000550629 TFPI2P48307 235 aa4.23□□□□□ -1.73
SCAF11-213ENST00000550629 RAB14P61106 215 aa4.23□□□□□ -1.73
SCAF11-213ENST00000550629 RANP62826 216 aaKnown RBP4.23□□□□□ -1.73
SCAF11-213ENST00000550629 PSG3Q16557 428 aa4.23□□□□□ -1.73
SCAF11-213ENST00000550629 PSMG4Q5JS54 123 aa4.23□□□□□ -1.73
SCAF11-213ENST00000550629 FOXI2Q6ZQN5 318 aa4.23□□□□□ -1.73
SCAF11-213ENST00000550629 C5orf17Q8NAS9 161 aa4.23□□□□□ -1.73
SCAF11-213ENST00000550629 BLNKQ8WV28 456 aa4.23□□□□□ -1.73
SCAF11-213ENST00000550629 C1QTNF4Q9BXJ3 329 aa4.23□□□□□ -1.73
SCAF11-213ENST00000550629 SELENOKQ9Y6D0 94 aa4.23□□□□□ -1.73
SCAF11-213ENST00000550629 FBN3Q75N90 2809 aa4.23□□□□□ -1.73
SCAF11-213ENST00000550629 NOTCH3Q9UM47 2321 aa4.23□□□□□ -1.73
SCAF11-213ENST00000550629 TRBV7-9A0A0J9YWB2 115 aa4.22□□□□□ -1.73
SCAF11-213ENST00000550629 A0A0J9YX75 114 aa4.22□□□□□ -1.73
SCAF11-213ENST00000550629 RBAKDNA6NC62 111 aa4.22□□□□□ -1.73
SCAF11-213ENST00000550629 FBLL1A6NHQ2 334 aaKnown RBP4.22□□□□□ -1.73
SCAF11-213ENST00000550629 FAM74A7A6NL05 159 aa4.22□□□□□ -1.73
SCAF11-213ENST00000550629 A8MTW9 85 aa4.22□□□□□ -1.73
SCAF11-213ENST00000550629 GGTLC3B5MD39 225 aa4.22□□□□□ -1.73
SCAF11-213ENST00000550629 H3BTX0 84 aa4.22□□□□□ -1.73
SCAF11-213ENST00000550629 NDUFS6O75380 124 aaKnown RBP4.22□□□□□ -1.73
SCAF11-213ENST00000550629 DUSP14O95147 198 aaKnown RBP4.22□□□□□ -1.73
SCAF11-213ENST00000550629 SLC25A5P05141 298 aaKnown RBP4.22□□□□□ -1.73
SCAF11-213ENST00000550629 NMBP08949 121 aa4.22□□□□□ -1.73
SCAF11-213ENST00000550629 CD7P09564 240 aa4.22□□□□□ -1.73
SCAF11-213ENST00000550629 HLA-DRB4P13762 266 aa4.22□□□□□ -1.73
SCAF11-213ENST00000550629 FGF8P55075 233 aaPredicted RBP4.22□□□□□ -1.73
SCAF11-213ENST00000550629 DEFB131AP59861 70 aa4.22□□□□□ -1.73
SCAF11-213ENST00000550629 ERVFC1-1P60608 527 aa4.22□□□□□ -1.73
SCAF11-213ENST00000550629 EBLN2Q6P2I7 272 aa4.22□□□□□ -1.73
SCAF11-213ENST00000550629 IQCF2Q8IXL9 164 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms