RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 DYNC2H1Q8NCM8 4307 aaKnown RBP18.62■□□□□ 0.57
CPSF6-205ENST00000550075 TRAV10A0A0B4J240 114 aa18.61■□□□□ 0.57
CPSF6-205ENST00000550075 KANTRA0A1W2PQU2 76 aa18.61■□□□□ 0.57
CPSF6-205ENST00000550075 RBAKDNA6NC62 111 aa18.61■□□□□ 0.57
CPSF6-205ENST00000550075 CXorf1O96002 111 aa18.61■□□□□ 0.57
CPSF6-205ENST00000550075 SLC25A5P05141 298 aaKnown RBP18.61■□□□□ 0.57
CPSF6-205ENST00000550075 Q6ZNX1 250 aa18.61■□□□□ 0.57
CPSF6-205ENST00000550075 Q6ZTC4 211 aa18.61■□□□□ 0.57
CPSF6-205ENST00000550075 NIPSNAP3BQ9BS92 247 aa18.61■□□□□ 0.57
CPSF6-205ENST00000550075 CYTL1Q9NRR1 136 aa18.61■□□□□ 0.57
CPSF6-205ENST00000550075 TMEM167BQ9NRX6 74 aa18.61■□□□□ 0.57
CPSF6-205ENST00000550075 YTHDF2Q9Y5A9 579 aaKnown RBP18.61■□□□□ 0.57
CPSF6-205ENST00000550075 J3KRW8 73 aa18.6■□□□□ 0.57
CPSF6-205ENST00000550075 OR11H4Q8NGC9 324 aa18.6■□□□□ 0.57
CPSF6-205ENST00000550075 DKK2Q9UBU2 259 aa18.6■□□□□ 0.57
CPSF6-205ENST00000550075 CTXND1A0A1B0GTU2 59 aa18.59■□□□□ 0.57
CPSF6-205ENST00000550075 NMBP08949 121 aa18.59■□□□□ 0.57
CPSF6-205ENST00000550075 GCHFRP30047 84 aa18.59■□□□□ 0.57
CPSF6-205ENST00000550075 ZNF138P52744 262 aa18.59■□□□□ 0.57
CPSF6-205ENST00000550075 FAM222AQ5U5X8 452 aa18.59■□□□□ 0.57
CPSF6-205ENST00000550075 ARL6IP6Q8N6S5 226 aa18.59■□□□□ 0.57
CPSF6-205ENST00000550075 C2CD4CQ8TF44 421 aa18.59■□□□□ 0.57
CPSF6-205ENST00000550075 C16orf74Q96GX8 76 aa18.59■□□□□ 0.57
CPSF6-205ENST00000550075 HYLS1Q96M11 299 aa18.59■□□□□ 0.57
CPSF6-205ENST00000550075 VGLL1Q99990 258 aa18.59■□□□□ 0.57
CPSF6-205ENST00000550075 TRBV7-9A0A0J9YWB2 115 aa18.58■□□□□ 0.56
CPSF6-205ENST00000550075 C7orf71A4D174 169 aa18.58■□□□□ 0.56
CPSF6-205ENST00000550075 PGPA6NDG6 321 aa18.58■□□□□ 0.56
CPSF6-205ENST00000550075 BCL2L11O43521 198 aa18.58■□□□□ 0.56
CPSF6-205ENST00000550075 CRISP2P16562 243 aa18.58■□□□□ 0.56
CPSF6-205ENST00000550075 EIF5AP63241 154 aaKnown RBP18.58■□□□□ 0.56
CPSF6-205ENST00000550075 KIR3DS1Q14943 382 aa18.58■□□□□ 0.56
CPSF6-205ENST00000550075 C12orf74Q32Q52 190 aa18.58■□□□□ 0.56
CPSF6-205ENST00000550075 FAM19A4Q96LR4 140 aa18.58■□□□□ 0.56
CPSF6-205ENST00000550075 ZNF492Q9P255 531 aa18.58■□□□□ 0.56
CPSF6-205ENST00000550075 TRAV12-3A0A0B4J271 114 aa18.57■□□□□ 0.56
CPSF6-205ENST00000550075 KLLNB2CW77 178 aa18.57■□□□□ 0.56
CPSF6-205ENST00000550075 DIRC3C9JPN6 131 aa18.57■□□□□ 0.56
CPSF6-205ENST00000550075 PFDN1O60925 122 aa18.57■□□□□ 0.56
CPSF6-205ENST00000550075 HTN1P15515 57 aa18.57■□□□□ 0.56
CPSF6-205ENST00000550075 ZNF493Q6ZR52 646 aa18.57■□□□□ 0.56
CPSF6-205ENST00000550075 CCDC28AQ8IWP9 274 aa18.57■□□□□ 0.56
CPSF6-205ENST00000550075 IQCF2Q8IXL9 164 aa18.57■□□□□ 0.56
CPSF6-205ENST00000550075 TCTE3Q8IZS6 198 aa18.57■□□□□ 0.56
CPSF6-205ENST00000550075 ZNF471Q9BX82 626 aaPredicted RBP18.57■□□□□ 0.56
CPSF6-205ENST00000550075 LYRM9A8MSI8 78 aa18.56■□□□□ 0.56
CPSF6-205ENST00000550075 GPX1P07203 203 aa18.56■□□□□ 0.56
CPSF6-205ENST00000550075 TCTAP57738 103 aa18.56■□□□□ 0.56
CPSF6-205ENST00000550075 ZNF767PQ75MW2 155 aa18.56■□□□□ 0.56
CPSF6-205ENST00000550075 TMEM263Q8WUH6 116 aaKnown RBP18.56■□□□□ 0.56
CPSF6-205ENST00000550075 ST6GAL2Q96JF0 529 aa18.56■□□□□ 0.56
CPSF6-205ENST00000550075 PYGO2Q9BRQ0 406 aa18.56■□□□□ 0.56
CPSF6-205ENST00000550075 RPH3ALQ9UNE2 315 aa18.56■□□□□ 0.56
CPSF6-205ENST00000550075 SUN5Q8TC36 379 aa18.55■□□□□ 0.56
CPSF6-205ENST00000550075 DAD1P61803 113 aa18.54■□□□□ 0.56
CPSF6-205ENST00000550075 Q8TAT8 98 aa18.54■□□□□ 0.56
CPSF6-205ENST00000550075 LENEPQ9Y5L5 61 aa18.54■□□□□ 0.56
CPSF6-205ENST00000550075 DEFB131BA0A096LNP1 70 aa18.53■□□□□ 0.56
CPSF6-205ENST00000550075 SERTM2A0A1B0GWG4 89 aa18.53■□□□□ 0.56
CPSF6-205ENST00000550075 AZU1P20160 251 aa18.53■□□□□ 0.56
CPSF6-205ENST00000550075 SSX7Q7RTT5 188 aa18.53■□□□□ 0.56
CPSF6-205ENST00000550075 C5orf17Q8NAS9 161 aa18.53■□□□□ 0.56
CPSF6-205ENST00000550075 TMED6Q8WW62 240 aa18.53■□□□□ 0.56
CPSF6-205ENST00000550075 LYSTQ99698 3801 aa18.53■□□□□ 0.56
CPSF6-205ENST00000550075 PRM2P04554 102 aa18.52■□□□□ 0.56
CPSF6-205ENST00000550075 SEC11BP0C7V7 166 aa18.52■□□□□ 0.56
CPSF6-205ENST00000550075 RNASE4P34096 147 aaKnown RBP18.52■□□□□ 0.56
CPSF6-205ENST00000550075 BTN1A1Q13410 526 aa18.52■□□□□ 0.56
CPSF6-205ENST00000550075 ZNF726P1Q15940 193 aa18.52■□□□□ 0.56
CPSF6-205ENST00000550075 GOLT1AQ6ZVE7 132 aa18.52■□□□□ 0.56
CPSF6-205ENST00000550075 TMUB2Q71RG4 321 aa18.52■□□□□ 0.56
CPSF6-205ENST00000550075 ZFAND2AQ8N6M9 145 aa18.52■□□□□ 0.56
CPSF6-205ENST00000550075 TIMM8BQ9Y5J9 83 aaPredicted RBP18.52■□□□□ 0.56
CPSF6-205ENST00000550075 ALMS1Q8TCU4 4167 aa18.52■□□□□ 0.56
CPSF6-205ENST00000550075 IGLL5B9A064 214 aa18.51■□□□□ 0.55
CPSF6-205ENST00000550075 K7EQM0 130 aa18.51■□□□□ 0.55
CPSF6-205ENST00000550075 RNASE8Q8TDE3 154 aaKnown RBP18.51■□□□□ 0.55
CPSF6-205ENST00000550075 MAP1LC3B2A6NCE7 125 aa18.5■□□□□ 0.55
CPSF6-205ENST00000550075 UMAD1C9J7I0 102 aa18.5■□□□□ 0.55
CPSF6-205ENST00000550075 TPT1P13693 172 aaKnown RBP18.5■□□□□ 0.55
CPSF6-205ENST00000550075 CD300CQ08708 224 aa18.5■□□□□ 0.55
CPSF6-205ENST00000550075 AKAP14Q86UN6 197 aa18.5■□□□□ 0.55
CPSF6-205ENST00000550075 STOML3Q8TAV4 291 aa18.5■□□□□ 0.55
CPSF6-205ENST00000550075 MAP1LC3BQ9GZQ8 125 aa18.5■□□□□ 0.55
CPSF6-205ENST00000550075 hCG_2014768A0A024R1R8 64 aa18.49■□□□□ 0.55
CPSF6-205ENST00000550075 A0A1W2PRE2 83 aa18.49■□□□□ 0.55
CPSF6-205ENST00000550075 PLAC8L1A1L4L8 177 aa18.49■□□□□ 0.55
CPSF6-205ENST00000550075 ZNF680Q8NEM1 530 aa18.49■□□□□ 0.55
CPSF6-205ENST00000550075 LINC00476Q8WZB0 136 aa18.49■□□□□ 0.55
CPSF6-205ENST00000550075 LINC00467Q9BRT7 94 aa18.49■□□□□ 0.55
CPSF6-205ENST00000550075 SNURFLB1AK76 121 aa18.48■□□□□ 0.55
CPSF6-205ENST00000550075 C1QBP02746 253 aa18.48■□□□□ 0.55
CPSF6-205ENST00000550075 GNG5P63218 68 aa18.48■□□□□ 0.55
CPSF6-205ENST00000550075 PLECQ15149 4684 aaKnown RBP18.48■□□□□ 0.55
CPSF6-205ENST00000550075 GGTLC3B5MD39 225 aa18.47■□□□□ 0.55
CPSF6-205ENST00000550075 RGS13O14921 159 aa18.47■□□□□ 0.55
CPSF6-205ENST00000550075 ZNF324O75467 553 aaPredicted RBP18.47■□□□□ 0.55
CPSF6-205ENST00000550075 SUMO1P63165 101 aaKnown RBP18.47■□□□□ 0.55
CPSF6-205ENST00000550075 EIF4E3Q8N5X7 224 aaKnown RBP18.47■□□□□ 0.55
CPSF6-205ENST00000550075 NDFIP1Q9BT67 221 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms