RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 ZFP69Q49AA0 526 aa13.97□□□□□ -0.17
DDX54-207ENST00000550016 TMEM78Q5T7P6 136 aa13.97□□□□□ -0.17
DDX54-207ENST00000550016 CMTM2Q8TAZ6 248 aa13.97□□□□□ -0.17
DDX54-207ENST00000550016 DIRC3C9JPN6 131 aa13.96□□□□□ -0.17
DDX54-207ENST00000550016 SLC25A5P05141 298 aaKnown RBP13.96□□□□□ -0.17
DDX54-207ENST00000550016 IQCF2Q8IXL9 164 aa13.96□□□□□ -0.17
DDX54-207ENST00000550016 TMEM256Q8N2U0 113 aa13.96□□□□□ -0.17
DDX54-207ENST00000550016 MAP1LC3B2A6NCE7 125 aa13.95□□□□□ -0.18
DDX54-207ENST00000550016 HBE1P02100 147 aa13.95□□□□□ -0.18
DDX54-207ENST00000550016 FGF8P55075 233 aaPredicted RBP13.95□□□□□ -0.18
DDX54-207ENST00000550016 ZFAND6Q6FIF0 208 aa13.95□□□□□ -0.18
DDX54-207ENST00000550016 TMED6Q8WW62 240 aa13.95□□□□□ -0.18
DDX54-207ENST00000550016 FAM19A4Q96LR4 140 aa13.95□□□□□ -0.18
DDX54-207ENST00000550016 C20orf144Q9BQM9 153 aa13.95□□□□□ -0.18
DDX54-207ENST00000550016 MAP1LC3BQ9GZQ8 125 aa13.95□□□□□ -0.18
DDX54-207ENST00000550016 DNAH7Q8WXX0 4024 aa13.95□□□□□ -0.18
DDX54-207ENST00000550016 TMEM189A5PLL7 270 aa13.94□□□□□ -0.18
DDX54-207ENST00000550016 FHITP49789 147 aa13.94□□□□□ -0.18
DDX54-207ENST00000550016 ZNF138P52744 262 aa13.94□□□□□ -0.18
DDX54-207ENST00000550016 KIR3DS1Q14943 382 aa13.94□□□□□ -0.18
DDX54-207ENST00000550016 RRN3P1Q2M238 152 aa13.94□□□□□ -0.18
DDX54-207ENST00000550016 CASC10Q5T4H9 136 aa13.94□□□□□ -0.18
DDX54-207ENST00000550016 GFI1BQ5VTD9 330 aa13.94□□□□□ -0.18
DDX54-207ENST00000550016 EIF5AL1Q6IS14 154 aaKnown RBP13.94□□□□□ -0.18
DDX54-207ENST00000550016 DPPA3Q6W0C5 159 aa13.94□□□□□ -0.18
DDX54-207ENST00000550016 C9orf62Q8N4C0 152 aa13.94□□□□□ -0.18
DDX54-207ENST00000550016 C11orf45Q8TAV5 145 aa13.94□□□□□ -0.18
DDX54-207ENST00000550016 FAM213BQ8TBF2 198 aa13.94□□□□□ -0.18
DDX54-207ENST00000550016 LINC01587Q99440 93 aa13.94□□□□□ -0.18
DDX54-207ENST00000550016 TMPRSS5Q9H3S3 457 aa13.94□□□□□ -0.18
DDX54-207ENST00000550016 ZNF492Q9P255 531 aa13.94□□□□□ -0.18
DDX54-207ENST00000550016 A0A1W2PRE2 83 aa13.93□□□□□ -0.18
DDX54-207ENST00000550016 NMBP08949 121 aa13.93□□□□□ -0.18
DDX54-207ENST00000550016 CRISP2P16562 243 aa13.93□□□□□ -0.18
DDX54-207ENST00000550016 SUMO1P63165 101 aaKnown RBP13.93□□□□□ -0.18
DDX54-207ENST00000550016 SLC51BQ86UW2 128 aa13.93□□□□□ -0.18
DDX54-207ENST00000550016 RPH3ALQ9UNE2 315 aa13.93□□□□□ -0.18
DDX54-207ENST00000550016 TRBV7-9A0A0J9YWB2 115 aa13.92□□□□□ -0.18
DDX54-207ENST00000550016 LOC102723971A0A1B0GUV8 181 aa13.92□□□□□ -0.18
DDX54-207ENST00000550016 ZNF705GA8MUZ8 300 aaPredicted RBP13.92□□□□□ -0.18
DDX54-207ENST00000550016 J3KRW8 73 aa13.92□□□□□ -0.18
DDX54-207ENST00000550016 GOLT1AQ6ZVE7 132 aa13.92□□□□□ -0.18
DDX54-207ENST00000550016 C5orf17Q8NAS9 161 aa13.92□□□□□ -0.18
DDX54-207ENST00000550016 MBD3L1Q8WWY6 194 aa13.92□□□□□ -0.18
DDX54-207ENST00000550016 KLLNB2CW77 178 aa13.91□□□□□ -0.18
DDX54-207ENST00000550016 H7BYZ3 331 aa13.91□□□□□ -0.18
DDX54-207ENST00000550016 TAS2R60P59551 318 aa13.91□□□□□ -0.18
DDX54-207ENST00000550016 NANOS2P60321 138 aaKnown RBP13.91□□□□□ -0.18
DDX54-207ENST00000550016 GNG5P63218 68 aa13.91□□□□□ -0.18
DDX54-207ENST00000550016 SFT2D1Q8WV19 159 aa13.91□□□□□ -0.18
DDX54-207ENST00000550016 LENEPQ9Y5L5 61 aa13.91□□□□□ -0.18
DDX54-207ENST00000550016 TRAV12-3A0A0B4J271 114 aa13.9□□□□□ -0.18
DDX54-207ENST00000550016 SERTM2A0A1B0GWG4 89 aa13.9□□□□□ -0.18
DDX54-207ENST00000550016 C7orf71A4D174 169 aa13.9□□□□□ -0.18
DDX54-207ENST00000550016 CXorf65A6NEN9 183 aa13.9□□□□□ -0.18
DDX54-207ENST00000550016 GGTLC3B5MD39 225 aa13.9□□□□□ -0.18
DDX54-207ENST00000550016 GPX1P07203 203 aa13.9□□□□□ -0.18
DDX54-207ENST00000550016 EMP1P54849 157 aa13.9□□□□□ -0.18
DDX54-207ENST00000550016 PMS2P11Q13670 270 aa13.9□□□□□ -0.18
DDX54-207ENST00000550016 ZFAND2AQ8N6M9 145 aa13.9□□□□□ -0.18
DDX54-207ENST00000550016 Q8TAT8 98 aa13.9□□□□□ -0.18
DDX54-207ENST00000550016 NIPSNAP3BQ9BS92 247 aa13.9□□□□□ -0.18
DDX54-207ENST00000550016 NKX6-2Q9C056 277 aaPredicted RBP13.9□□□□□ -0.18
DDX54-207ENST00000550016 EPDR1Q9UM22 224 aa13.9□□□□□ -0.18
DDX54-207ENST00000550016 YTHDF2Q9Y5A9 579 aaKnown RBP13.9□□□□□ -0.18
DDX54-207ENST00000550016 PRM2P04554 102 aa13.89□□□□□ -0.19
DDX54-207ENST00000550016 RNASE4P34096 147 aaKnown RBP13.89□□□□□ -0.19
DDX54-207ENST00000550016 RAB5CP51148 216 aa13.89□□□□□ -0.19
DDX54-207ENST00000550016 UBE2G2P60604 165 aa13.89□□□□□ -0.19
DDX54-207ENST00000550016 FAM74A7A6NL05 159 aa13.88□□□□□ -0.19
DDX54-207ENST00000550016 K7EQM0 130 aa13.88□□□□□ -0.19
DDX54-207ENST00000550016 TCRAP04437 139 aa13.88□□□□□ -0.19
DDX54-207ENST00000550016 H2AFB1P0C5Y9 115 aa13.88□□□□□ -0.19
DDX54-207ENST00000550016 HTN1P15515 57 aa13.88□□□□□ -0.19
DDX54-207ENST00000550016 AZU1P20160 251 aa13.88□□□□□ -0.19
DDX54-207ENST00000550016 CELA1Q9UNI1 258 aa13.88□□□□□ -0.19
DDX54-207ENST00000550016 TENM2Q9NT68 2774 aa13.88□□□□□ -0.19
DDX54-207ENST00000550016 ZNF324O75467 553 aaPredicted RBP13.87□□□□□ -0.19
DDX54-207ENST00000550016 SPART-AS1P0CW21 52 aa13.87□□□□□ -0.19
DDX54-207ENST00000550016 SULT1A2P50226 295 aa13.87□□□□□ -0.19
DDX54-207ENST00000550016 BTN1A1Q13410 526 aa13.87□□□□□ -0.19
DDX54-207ENST00000550016 PYGO2Q9BRQ0 406 aa13.87□□□□□ -0.19
DDX54-207ENST00000550016 CSMD3Q7Z407 3707 aa13.87□□□□□ -0.19
DDX54-207ENST00000550016 TRAV8-1A0A0A6YYK1 113 aa13.86□□□□□ -0.19
DDX54-207ENST00000550016 TEX48A0A1B0GUV7 120 aa13.86□□□□□ -0.19
DDX54-207ENST00000550016 IFNA7P01567 189 aa13.86□□□□□ -0.19
DDX54-207ENST00000550016 NKX2-5P52952 324 aaPredicted RBP13.86□□□□□ -0.19
DDX54-207ENST00000550016 PRR9Q5T870 116 aa13.86□□□□□ -0.19
DDX54-207ENST00000550016 ZNF493Q6ZR52 646 aa13.86□□□□□ -0.19
DDX54-207ENST00000550016 CCDC28AQ8IWP9 274 aa13.86□□□□□ -0.19
DDX54-207ENST00000550016 PHLDA1Q8WV24 401 aaPredicted RBP13.86□□□□□ -0.19
DDX54-207ENST00000550016 ATG101Q9BSB4 218 aa13.86□□□□□ -0.19
DDX54-207ENST00000550016 DKK2Q9UBU2 259 aa13.86□□□□□ -0.19
DDX54-207ENST00000550016 ARL2-SNX15V9GYD0 113 aa13.86□□□□□ -0.19
DDX54-207ENST00000550016 NUPR2A6NF83 97 aa13.85□□□□□ -0.19
DDX54-207ENST00000550016 C12orf74Q32Q52 190 aa13.85□□□□□ -0.19
DDX54-207ENST00000550016 FAM222AQ5U5X8 452 aa13.85□□□□□ -0.19
DDX54-207ENST00000550016 CEMP1Q6PRD7 247 aaPredicted RBP13.85□□□□□ -0.19
DDX54-207ENST00000550016 CYB561D1Q8N8Q1 229 aa13.85□□□□□ -0.19
DDX54-207ENST00000550016 C16orf74Q96GX8 76 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms