RNA–Protein interactions for RNA: ENST00000549047.5

ARFGAP1-221, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 5

Gene ARFGAP1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-221ENST00000549047 OR10J4P0C629 311 aa10.66□□□□□ -0.7
ARFGAP1-221ENST00000549047 RPL12P30050 165 aaKnown RBP10.66□□□□□ -0.7
ARFGAP1-221ENST00000549047 FAM122CQ6P4D5 195 aa10.66□□□□□ -0.7
ARFGAP1-221ENST00000549047 RNF141Q8WVD5 230 aa10.66□□□□□ -0.7
ARFGAP1-221ENST00000549047 FXYD5Q96DB9 178 aa10.66□□□□□ -0.7
ARFGAP1-221ENST00000549047 FAM19A4Q96LR4 140 aa10.66□□□□□ -0.7
ARFGAP1-221ENST00000549047 PYGO2Q9BRQ0 406 aa10.66□□□□□ -0.7
ARFGAP1-221ENST00000549047 SMIM3Q9BZL3 60 aa10.66□□□□□ -0.7
ARFGAP1-221ENST00000549047 MBD2Q9UBB5 411 aa10.66□□□□□ -0.7
ARFGAP1-221ENST00000549047 C7orf71A4D174 169 aa10.65□□□□□ -0.7
ARFGAP1-221ENST00000549047 SNURFLB1AK76 121 aa10.65□□□□□ -0.7
ARFGAP1-221ENST00000549047 KLLNB2CW77 178 aa10.65□□□□□ -0.7
ARFGAP1-221ENST00000549047 NUDT3O95989 172 aa10.65□□□□□ -0.7
ARFGAP1-221ENST00000549047 IFNA5P01569 189 aa10.65□□□□□ -0.7
ARFGAP1-221ENST00000549047 FFAR4Q5NUL3 377 aa10.65□□□□□ -0.7
ARFGAP1-221ENST00000549047 C9orf47Q6ZRZ4 202 aa10.65□□□□□ -0.7
ARFGAP1-221ENST00000549047 LINC00612Q8N6U2 182 aa10.65□□□□□ -0.7
ARFGAP1-221ENST00000549047 ATG101Q9BSB4 218 aa10.65□□□□□ -0.7
ARFGAP1-221ENST00000549047 DNAH11Q96DT5 4516 aa10.65□□□□□ -0.7
ARFGAP1-221ENST00000549047 PKHD1P08F94 4074 aa10.65□□□□□ -0.7
ARFGAP1-221ENST00000549047 KIAA1109Q2LD37 5005 aa10.65□□□□□ -0.71
ARFGAP1-221ENST00000549047 GAGE12BA1L429 117 aa10.64□□□□□ -0.71
ARFGAP1-221ENST00000549047 RTL8CO15255 209 aa10.64□□□□□ -0.71
ARFGAP1-221ENST00000549047 OR7C2O60412 319 aa10.64□□□□□ -0.71
ARFGAP1-221ENST00000549047 GAGE7O76087 117 aa10.64□□□□□ -0.71
ARFGAP1-221ENST00000549047 GAGE12FP0CL80 117 aa10.64□□□□□ -0.71
ARFGAP1-221ENST00000549047 GAGE12GP0CL81 117 aa10.64□□□□□ -0.71
ARFGAP1-221ENST00000549047 GAGE12IP0CL82 117 aa10.64□□□□□ -0.71
ARFGAP1-221ENST00000549047 CD300CQ08708 224 aa10.64□□□□□ -0.71
ARFGAP1-221ENST00000549047 BTN1A1Q13410 526 aa10.64□□□□□ -0.71
ARFGAP1-221ENST00000549047 TMEM78Q5T7P6 136 aa10.64□□□□□ -0.71
ARFGAP1-221ENST00000549047 Q6ZR54 194 aa10.64□□□□□ -0.71
ARFGAP1-221ENST00000549047 SCGB1C1Q8TD33 95 aa10.64□□□□□ -0.71
ARFGAP1-221ENST00000549047 ZNF503Q96F45 646 aa10.64□□□□□ -0.71
ARFGAP1-221ENST00000549047 PHYHIPLQ96FC7 376 aa10.64□□□□□ -0.71
ARFGAP1-221ENST00000549047 VGLL1Q99990 258 aa10.64□□□□□ -0.71
ARFGAP1-221ENST00000549047 DYNC1H1Q14204 4646 aaKnown RBP10.64□□□□□ -0.71
ARFGAP1-221ENST00000549047 ZNF324O75467 553 aaPredicted RBP10.63□□□□□ -0.71
ARFGAP1-221ENST00000549047 CRISP2P16562 243 aa10.63□□□□□ -0.71
ARFGAP1-221ENST00000549047 RNASE4P34096 147 aaKnown RBP10.63□□□□□ -0.71
ARFGAP1-221ENST00000549047 FAM3BP58499 235 aaPredicted RBP10.63□□□□□ -0.71
ARFGAP1-221ENST00000549047 UBE2L3P68036 154 aaKnown RBP10.63□□□□□ -0.71
ARFGAP1-221ENST00000549047 ALG5Q9Y673 324 aa10.63□□□□□ -0.71
ARFGAP1-221ENST00000549047 PKD1P98161 4303 aa10.62□□□□□ -0.71
ARFGAP1-221ENST00000549047 PRSS29PA6NIE9 313 aa10.62□□□□□ -0.71
ARFGAP1-221ENST00000549047 GPX1P07203 203 aa10.62□□□□□ -0.71
ARFGAP1-221ENST00000549047 NMBP08949 121 aa10.62□□□□□ -0.71
ARFGAP1-221ENST00000549047 RANP62826 216 aaKnown RBP10.62□□□□□ -0.71
ARFGAP1-221ENST00000549047 DAZ2Q13117 558 aaKnown RBP10.62□□□□□ -0.71
ARFGAP1-221ENST00000549047 OR5I1Q13606 314 aa10.62□□□□□ -0.71
ARFGAP1-221ENST00000549047 ZFAND2AQ8N6M9 145 aa10.62□□□□□ -0.71
ARFGAP1-221ENST00000549047 ZNF680Q8NEM1 530 aa10.62□□□□□ -0.71
ARFGAP1-221ENST00000549047 LINC00467Q9BRT7 94 aa10.62□□□□□ -0.71
ARFGAP1-221ENST00000549047 WFDC1Q9HC57 220 aa10.62□□□□□ -0.71
ARFGAP1-221ENST00000549047 GSN-AS1Q9NRJ2 163 aa10.62□□□□□ -0.71
ARFGAP1-221ENST00000549047 TRAV26-1A0A087WT03 109 aa10.61□□□□□ -0.71
ARFGAP1-221ENST00000549047 M6PRP20645 277 aa10.61□□□□□ -0.71
ARFGAP1-221ENST00000549047 HOXA5P20719 270 aa10.61□□□□□ -0.71
ARFGAP1-221ENST00000549047 TAS2R45P59539 299 aa10.61□□□□□ -0.71
ARFGAP1-221ENST00000549047 KHDC3LQ587J8 217 aa10.61□□□□□ -0.71
ARFGAP1-221ENST00000549047 PRR9Q5T870 116 aa10.61□□□□□ -0.71
ARFGAP1-221ENST00000549047 Q6ZTI0 123 aa10.61□□□□□ -0.71
ARFGAP1-221ENST00000549047 EIF4E3Q8N5X7 224 aaKnown RBP10.61□□□□□ -0.71
ARFGAP1-221ENST00000549047 C11orf72Q8NBR9 251 aa10.61□□□□□ -0.71
ARFGAP1-221ENST00000549047 Q8TAT8 98 aa10.61□□□□□ -0.71
ARFGAP1-221ENST00000549047 ZNF492Q9P255 531 aa10.61□□□□□ -0.71
ARFGAP1-221ENST00000549047 A0A1B0GVY2 172 aa10.6□□□□□ -0.71
ARFGAP1-221ENST00000549047 EIF3GO75821 320 aaKnown RBP eCLIP10.6□□□□□ -0.71
ARFGAP1-221ENST00000549047 PTTG1O95997 202 aa10.6□□□□□ -0.71
ARFGAP1-221ENST00000549047 CSN1S1P47710 185 aa10.6□□□□□ -0.71
ARFGAP1-221ENST00000549047 ZNF138P52744 262 aa10.6□□□□□ -0.71
ARFGAP1-221ENST00000549047 CCL18P55774 89 aa10.6□□□□□ -0.71
ARFGAP1-221ENST00000549047 ANXA2RQ3ZCQ2 193 aa10.6□□□□□ -0.71
ARFGAP1-221ENST00000549047 LYPD1Q8N2G4 141 aa10.6□□□□□ -0.71
ARFGAP1-221ENST00000549047 GNPNAT1Q96EK6 184 aaPredicted RBP10.6□□□□□ -0.71
ARFGAP1-221ENST00000549047 Q9H3A6 140 aa10.6□□□□□ -0.71
ARFGAP1-221ENST00000549047 TMPRSS5Q9H3S3 457 aa10.6□□□□□ -0.71
ARFGAP1-221ENST00000549047 A0A0J9YY99 117 aa10.59□□□□□ -0.71
ARFGAP1-221ENST00000549047 SOHLH1Q5JUK2 328 aa10.59□□□□□ -0.71
ARFGAP1-221ENST00000549047 Q6ZQT7 251 aa10.59□□□□□ -0.71
ARFGAP1-221ENST00000549047 ZNRF2Q8NHG8 242 aa10.59□□□□□ -0.71
ARFGAP1-221ENST00000549047 LINC00588Q9Y4M8 146 aa10.59□□□□□ -0.71
ARFGAP1-221ENST00000549047 TRGV2A0A075B6R0 118 aa10.58□□□□□ -0.72
ARFGAP1-221ENST00000549047 TRGV1A0A0A0MS02 117 aa10.58□□□□□ -0.72
ARFGAP1-221ENST00000549047 TRBV7-9A0A0J9YWB2 115 aa10.58□□□□□ -0.72
ARFGAP1-221ENST00000549047 RBAKDNA6NC62 111 aa10.58□□□□□ -0.72
ARFGAP1-221ENST00000549047 RGS13O14921 159 aa10.58□□□□□ -0.72
ARFGAP1-221ENST00000549047 ACOT6Q3I5F7 207 aaPredicted RBP10.58□□□□□ -0.72
ARFGAP1-221ENST00000549047 C1orf134Q5TEV5 83 aa10.58□□□□□ -0.72
ARFGAP1-221ENST00000549047 RXFP4Q8TDU9 374 aa10.58□□□□□ -0.72
ARFGAP1-221ENST00000549047 KLF12Q9Y4X4 402 aa10.58□□□□□ -0.72
ARFGAP1-221ENST00000549047 IGHV1OR15-1A0A075B7D0 117 aa10.57□□□□□ -0.72
ARFGAP1-221ENST00000549047 TCL1AP56279 114 aa10.57□□□□□ -0.72
ARFGAP1-221ENST00000549047 RAB2AP61019 212 aa10.57□□□□□ -0.72
ARFGAP1-221ENST00000549047 IBA57Q5T440 356 aaKnown RBP10.57□□□□□ -0.72
ARFGAP1-221ENST00000549047 SSX7Q7RTT5 188 aa10.57□□□□□ -0.72
ARFGAP1-221ENST00000549047 HYLS1Q96M11 299 aa10.57□□□□□ -0.72
ARFGAP1-221ENST00000549047 MED28Q9H204 178 aa10.57□□□□□ -0.72
ARFGAP1-221ENST00000549047 TP53TG3Q9ULZ0 132 aa10.57□□□□□ -0.72
ARFGAP1-221ENST00000549047 NACAE9PAV3 2078 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms