RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 IGF2BP2-AS1Q96M15 143 aa15.09■□□□□ 0.01
SCARB1-211ENST00000546215 TRAV12-2A0A075B6T6 113 aa15.08■□□□□ 0
SCARB1-211ENST00000546215 A0A1B0GV50 99 aa15.08■□□□□ 0
SCARB1-211ENST00000546215 FAM74A7A6NL05 159 aa15.08■□□□□ 0
SCARB1-211ENST00000546215 SLC25A5P05141 298 aaKnown RBP15.08■□□□□ 0
SCARB1-211ENST00000546215 ALKAL2Q6UX46 152 aa15.08■□□□□ 0
SCARB1-211ENST00000546215 ZNF705AQ6ZN79 300 aaPredicted RBP15.08■□□□□ 0
SCARB1-211ENST00000546215 C5orf17Q8NAS9 161 aa15.08■□□□□ 0
SCARB1-211ENST00000546215 GNG5P63218 68 aa15.07■□□□□ 0
SCARB1-211ENST00000546215 TMEM78Q5T7P6 136 aa15.07■□□□□ 0
SCARB1-211ENST00000546215 C1orf158Q8N1D5 194 aa15.07■□□□□ 0
SCARB1-211ENST00000546215 FAM19A4Q96LR4 140 aa15.07■□□□□ 0
SCARB1-211ENST00000546215 RPH3ALQ9UNE2 315 aa15.07■□□□□ 0
SCARB1-211ENST00000546215 X6R8D5 127 aa15.07■□□□□ 0
SCARB1-211ENST00000546215 TRAV1-1A0A0B4J248 108 aa15.07■□□□□ 0
SCARB1-211ENST00000546215 TSPOP30536 169 aa15.07■□□□□ 0
SCARB1-211ENST00000546215 KIR3DS1Q14943 382 aa15.07■□□□□ 0
SCARB1-211ENST00000546215 GOLT1AQ6ZVE7 132 aa15.07■□□□□ 0
SCARB1-211ENST00000546215 EDA2RQ9HAV5 297 aa15.07■□□□□ 0
SCARB1-211ENST00000546215 ZNF492Q9P255 531 aa15.07■□□□□ 0
SCARB1-211ENST00000546215 NKX6-2Q9C056 277 aaPredicted RBP15.06■□□□□ 0
SCARB1-211ENST00000546215 EPDR1Q9UM22 224 aa15.06■□□□□ 0
SCARB1-211ENST00000546215 INSP01308 110 aa15.05■□□□□ -0
SCARB1-211ENST00000546215 TCRAP04437 139 aa15.05■□□□□ -0
SCARB1-211ENST00000546215 ZNF138P52744 262 aa15.05■□□□□ -0
SCARB1-211ENST00000546215 ARL2-SNX15V9GYD0 113 aa15.05■□□□□ -0
SCARB1-211ENST00000546215 RBMY1A1P0DJD3 496 aaKnown RBP15.04■□□□□ -0
SCARB1-211ENST00000546215 RBMY1CP0DJD4 496 aa15.04■□□□□ -0
SCARB1-211ENST00000546215 LEPP41159 167 aa15.04■□□□□ -0
SCARB1-211ENST00000546215 CCL20P78556 96 aa15.04■□□□□ -0
SCARB1-211ENST00000546215 RBMY1FQ15415 496 aaKnown RBP15.04■□□□□ -0
SCARB1-211ENST00000546215 Q8TAT8 98 aa15.04■□□□□ -0
SCARB1-211ENST00000546215 GOLT1BQ9Y3E0 138 aa15.04■□□□□ -0
SCARB1-211ENST00000546215 IGHV3OR16-12A0A075B7B8 117 aa15.03■□□□□ -0
SCARB1-211ENST00000546215 CRISP2P16562 243 aa15.03■□□□□ -0
SCARB1-211ENST00000546215 GFI1BQ5VTD9 330 aa15.03■□□□□ -0
SCARB1-211ENST00000546215 CCDC28AQ8IWP9 274 aa15.03■□□□□ -0
SCARB1-211ENST00000546215 Q8NAQ8 132 aa15.03■□□□□ -0
SCARB1-211ENST00000546215 NEU1Q99519 415 aa15.03■□□□□ -0
SCARB1-211ENST00000546215 TRAV8-1A0A0A6YYK1 113 aa15.02■□□□□ -0
SCARB1-211ENST00000546215 TRBV7-9A0A0J9YWB2 115 aa15.02■□□□□ -0
SCARB1-211ENST00000546215 A0A0J9YWU9 116 aa15.02■□□□□ -0
SCARB1-211ENST00000546215 SERTM2A0A1B0GWG4 89 aa15.02■□□□□ -0
SCARB1-211ENST00000546215 KLLNB2CW77 178 aa15.02■□□□□ -0
SCARB1-211ENST00000546215 PAGE4O60829 102 aa15.02■□□□□ -0
SCARB1-211ENST00000546215 TEX46H3BTG2 121 aa15.02□□□□□ -0.01
SCARB1-211ENST00000546215 J3KRW8 73 aa15.02□□□□□ -0.01
SCARB1-211ENST00000546215 IFNA7P01567 189 aa15.02□□□□□ -0.01
SCARB1-211ENST00000546215 HBE1P02100 147 aa15.02□□□□□ -0.01
SCARB1-211ENST00000546215 NMBP08949 121 aa15.02□□□□□ -0.01
SCARB1-211ENST00000546215 MIFP14174 115 aa15.02□□□□□ -0.01
SCARB1-211ENST00000546215 PPT1P50897 306 aa15.02□□□□□ -0.01
SCARB1-211ENST00000546215 CST9LP1Q5W188 147 aa15.02□□□□□ -0.01
SCARB1-211ENST00000546215 ZFAND2AQ8N6M9 145 aa15.02□□□□□ -0.01
SCARB1-211ENST00000546215 WWC2-AS2Q96NR7 200 aa15.02□□□□□ -0.01
SCARB1-211ENST00000546215 ATG101Q9BSB4 218 aa15.02□□□□□ -0.01
SCARB1-211ENST00000546215 LENEPQ9Y5L5 61 aa15.02□□□□□ -0.01
SCARB1-211ENST00000546215 CYB561D1Q8N8Q1 229 aa15.01□□□□□ -0.01
SCARB1-211ENST00000546215 IGHV4-28A0A0C4DH34 117 aa15□□□□□ -0.01
SCARB1-211ENST00000546215 ATP5G3P48201 142 aa15□□□□□ -0.01
SCARB1-211ENST00000546215 SGK494Q96LW2 274 aa15□□□□□ -0.01
SCARB1-211ENST00000546215 C20orf144Q9BQM9 153 aa15□□□□□ -0.01
SCARB1-211ENST00000546215 TMEM208Q9BTX3 173 aa15□□□□□ -0.01
SCARB1-211ENST00000546215 SMIM9A6NGZ8 99 aa14.99□□□□□ -0.01
SCARB1-211ENST00000546215 K7EQM0 130 aa14.99□□□□□ -0.01
SCARB1-211ENST00000546215 DEFB4AO15263 64 aa14.99□□□□□ -0.01
SCARB1-211ENST00000546215 IGLV2-11P01706 119 aa14.99□□□□□ -0.01
SCARB1-211ENST00000546215 PRR9Q5T870 116 aa14.99□□□□□ -0.01
SCARB1-211ENST00000546215 TMEM256Q8N2U0 113 aa14.99□□□□□ -0.01
SCARB1-211ENST00000546215 HIST1H2BAQ96A08 127 aa14.99□□□□□ -0.01
SCARB1-211ENST00000546215 C11orf68Q9H3H3 251 aaKnown RBP14.99□□□□□ -0.01
SCARB1-211ENST00000546215 TRAV12-3A0A0B4J271 114 aa14.98□□□□□ -0.01
SCARB1-211ENST00000546215 PEX7O00628 323 aa14.98□□□□□ -0.01
SCARB1-211ENST00000546215 GPX1P07203 203 aa14.98□□□□□ -0.01
SCARB1-211ENST00000546215 BLOC1S1P78537 153 aa14.98□□□□□ -0.01
SCARB1-211ENST00000546215 BTN1A1Q13410 526 aa14.98□□□□□ -0.01
SCARB1-211ENST00000546215 TVP23CQ96ET8 276 aa14.98□□□□□ -0.01
SCARB1-211ENST00000546215 LINC00479Q96M42 142 aa14.98□□□□□ -0.01
SCARB1-211ENST00000546215 TCEAL7Q9BRU2 100 aa14.98□□□□□ -0.01
SCARB1-211ENST00000546215 MANBALQ9NQG1 85 aa14.98□□□□□ -0.01
SCARB1-211ENST00000546215 GNG13Q9P2W3 67 aa14.98□□□□□ -0.01
SCARB1-211ENST00000546215 C7orf71A4D174 169 aa14.98□□□□□ -0.01
SCARB1-211ENST00000546215 ZNF324O75467 553 aaPredicted RBP14.98□□□□□ -0.01
SCARB1-211ENST00000546215 PRM2P04554 102 aa14.98□□□□□ -0.01
SCARB1-211ENST00000546215 RNASE4P34096 147 aaKnown RBP14.98□□□□□ -0.01
SCARB1-211ENST00000546215 PMS2P11Q13670 270 aa14.98□□□□□ -0.01
SCARB1-211ENST00000546215 TMEM75Q8N9X5 138 aa14.98□□□□□ -0.01
SCARB1-211ENST00000546215 LINC01587Q99440 93 aa14.98□□□□□ -0.01
SCARB1-211ENST00000546215 TEX261Q6UWH6 196 aa14.97□□□□□ -0.01
SCARB1-211ENST00000546215 LYPD6BQ8NI32 183 aa14.97□□□□□ -0.01
SCARB1-211ENST00000546215 PSG8Q9UQ74 426 aa14.97□□□□□ -0.01
SCARB1-211ENST00000546215 TRAV34A0A0B4J273 112 aa14.96□□□□□ -0.01
SCARB1-211ENST00000546215 ZNF705GA8MUZ8 300 aaPredicted RBP14.96□□□□□ -0.01
SCARB1-211ENST00000546215 H7BYZ3 331 aa14.96□□□□□ -0.01
SCARB1-211ENST00000546215 FLI1Q01543 452 aaPredicted RBP14.96□□□□□ -0.01
SCARB1-211ENST00000546215 NIPSNAP3BQ9BS92 247 aa14.96□□□□□ -0.01
SCARB1-211ENST00000546215 FBLL1A6NHQ2 334 aaKnown RBP14.95□□□□□ -0.02
SCARB1-211ENST00000546215 C11orf94C9JXX5 98 aa14.95□□□□□ -0.02
SCARB1-211ENST00000546215 F6UZH7 168 aa14.95□□□□□ -0.02
SCARB1-211ENST00000546215 TAS2R60P59551 318 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms