RNA–Protein interactions for RNA: ENST00000544454.5

LTBR-213, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-213ENST00000544454 C20orf144Q9BQM9 153 aa9.88□□□□□ -0.83
LTBR-213ENST00000544454 IGKV2-40A0A087WW87 121 aaPredicted RBP9.87□□□□□ -0.83
LTBR-213ENST00000544454 UMAD1C9J7I0 102 aa9.87□□□□□ -0.83
LTBR-213ENST00000544454 IGKV2D-40P01614 121 aaPredicted RBP9.87□□□□□ -0.83
LTBR-213ENST00000544454 SLC25A5P05141 298 aaKnown RBP9.87□□□□□ -0.83
LTBR-213ENST00000544454 NMBP08949 121 aa9.87□□□□□ -0.83
LTBR-213ENST00000544454 TPT1P13693 172 aaKnown RBP9.87□□□□□ -0.83
LTBR-213ENST00000544454 RRN3P1Q2M238 152 aa9.87□□□□□ -0.83
LTBR-213ENST00000544454 TMEM78Q5T7P6 136 aa9.87□□□□□ -0.83
LTBR-213ENST00000544454 SSX7Q7RTT5 188 aa9.87□□□□□ -0.83
LTBR-213ENST00000544454 CMTM2Q8TAZ6 248 aa9.87□□□□□ -0.83
LTBR-213ENST00000544454 FAM19A4Q96LR4 140 aa9.87□□□□□ -0.83
LTBR-213ENST00000544454 VGLL1Q99990 258 aa9.87□□□□□ -0.83
LTBR-213ENST00000544454 TRBV7-9A0A0J9YWB2 115 aa9.86□□□□□ -0.83
LTBR-213ENST00000544454 DIRC3C9JPN6 131 aa9.86□□□□□ -0.83
LTBR-213ENST00000544454 ZNF138P52744 262 aa9.86□□□□□ -0.83
LTBR-213ENST00000544454 STOML3Q8TAV4 291 aa9.86□□□□□ -0.83
LTBR-213ENST00000544454 LINC01587Q99440 93 aa9.86□□□□□ -0.83
LTBR-213ENST00000544454 ZNF492Q9P255 531 aa9.86□□□□□ -0.83
LTBR-213ENST00000544454 A0A1B0GVG6 124 aa9.85□□□□□ -0.83
LTBR-213ENST00000544454 CXorf65A6NEN9 183 aa9.85□□□□□ -0.83
LTBR-213ENST00000544454 H7BYZ3 331 aa9.85□□□□□ -0.83
LTBR-213ENST00000544454 CRISP2P16562 243 aa9.85□□□□□ -0.83
LTBR-213ENST00000544454 TAS2R60P59551 318 aa9.85□□□□□ -0.83
LTBR-213ENST00000544454 KIR3DS1Q14943 382 aa9.85□□□□□ -0.83
LTBR-213ENST00000544454 GFI1BQ5VTD9 330 aa9.85□□□□□ -0.83
LTBR-213ENST00000544454 EIF5AL1Q6IS14 154 aaKnown RBP9.85□□□□□ -0.83
LTBR-213ENST00000544454 DPPA3Q6W0C5 159 aa9.85□□□□□ -0.83
LTBR-213ENST00000544454 PLA2G2EQ9NZK7 142 aa9.85□□□□□ -0.83
LTBR-213ENST00000544454 LOC102723971A0A1B0GUV8 181 aa9.84□□□□□ -0.83
LTBR-213ENST00000544454 A0A1W2PRE2 83 aa9.84□□□□□ -0.83
LTBR-213ENST00000544454 ZNF705GA8MUZ8 300 aaPredicted RBP9.84□□□□□ -0.83
LTBR-213ENST00000544454 KLLNB2CW77 178 aa9.84□□□□□ -0.83
LTBR-213ENST00000544454 NANOS2P60321 138 aaKnown RBP9.84□□□□□ -0.83
LTBR-213ENST00000544454 IQCF2Q8IXL9 164 aa9.84□□□□□ -0.83
LTBR-213ENST00000544454 TMED6Q8WW62 240 aa9.84□□□□□ -0.83
LTBR-213ENST00000544454 LENEPQ9Y5L5 61 aa9.84□□□□□ -0.83
LTBR-213ENST00000544454 STARD9Q9P2P6 4700 aa9.84□□□□□ -0.83
LTBR-213ENST00000544454 TENM2Q9NT68 2774 aa9.84□□□□□ -0.83
LTBR-213ENST00000544454 SERTM2A0A1B0GWG4 89 aa9.83□□□□□ -0.84
LTBR-213ENST00000544454 MAP1LC3B2A6NCE7 125 aa9.83□□□□□ -0.84
LTBR-213ENST00000544454 SPART-AS1P0CW21 52 aa9.83□□□□□ -0.84
LTBR-213ENST00000544454 FHITP49789 147 aa9.83□□□□□ -0.84
LTBR-213ENST00000544454 EMP1P54849 157 aa9.83□□□□□ -0.84
LTBR-213ENST00000544454 SUMO1P63165 101 aaKnown RBP9.83□□□□□ -0.84
LTBR-213ENST00000544454 CD300CQ08708 224 aa9.83□□□□□ -0.84
LTBR-213ENST00000544454 PMS2P11Q13670 270 aa9.83□□□□□ -0.84
LTBR-213ENST00000544454 ZFP69Q49AA0 526 aa9.83□□□□□ -0.84
LTBR-213ENST00000544454 CEMP1Q6PRD7 247 aaPredicted RBP9.83□□□□□ -0.84
LTBR-213ENST00000544454 SLC51BQ86UW2 128 aa9.83□□□□□ -0.84
LTBR-213ENST00000544454 ZFAND2AQ8N6M9 145 aa9.83□□□□□ -0.84
LTBR-213ENST00000544454 C5orf17Q8NAS9 161 aa9.83□□□□□ -0.84
LTBR-213ENST00000544454 MBD3L1Q8WWY6 194 aa9.83□□□□□ -0.84
LTBR-213ENST00000544454 NIPSNAP3BQ9BS92 247 aa9.83□□□□□ -0.84
LTBR-213ENST00000544454 NKX6-2Q9C056 277 aaPredicted RBP9.83□□□□□ -0.84
LTBR-213ENST00000544454 MAP1LC3BQ9GZQ8 125 aa9.83□□□□□ -0.84
LTBR-213ENST00000544454 TMPRSS5Q9H3S3 457 aa9.83□□□□□ -0.84
LTBR-213ENST00000544454 KMT2CQ8NEZ4 4911 aaKnown RBP9.82□□□□□ -0.84
LTBR-213ENST00000544454 TRAV12-3A0A0B4J271 114 aa9.82□□□□□ -0.84
LTBR-213ENST00000544454 TEX48A0A1B0GUV7 120 aa9.82□□□□□ -0.84
LTBR-213ENST00000544454 C7orf71A4D174 169 aa9.82□□□□□ -0.84
LTBR-213ENST00000544454 NUPR2A6NF83 97 aa9.82□□□□□ -0.84
LTBR-213ENST00000544454 J3KRW8 73 aa9.82□□□□□ -0.84
LTBR-213ENST00000544454 ZNF324O75467 553 aaPredicted RBP9.82□□□□□ -0.84
LTBR-213ENST00000544454 GPX1P07203 203 aa9.82□□□□□ -0.84
LTBR-213ENST00000544454 RNASE4P34096 147 aaKnown RBP9.82□□□□□ -0.84
LTBR-213ENST00000544454 RAB5CP51148 216 aa9.82□□□□□ -0.84
LTBR-213ENST00000544454 FGF8P55075 233 aaPredicted RBP9.82□□□□□ -0.84
LTBR-213ENST00000544454 ZNF493Q6ZR52 646 aa9.82□□□□□ -0.84
LTBR-213ENST00000544454 GOLT1AQ6ZVE7 132 aa9.82□□□□□ -0.84
LTBR-213ENST00000544454 C9orf62Q8N4C0 152 aa9.82□□□□□ -0.84
LTBR-213ENST00000544454 FAM213BQ8TBF2 198 aa9.82□□□□□ -0.84
LTBR-213ENST00000544454 PHLDA1Q8WV24 401 aaPredicted RBP9.82□□□□□ -0.84
LTBR-213ENST00000544454 EPDR1Q9UM22 224 aa9.82□□□□□ -0.84
LTBR-213ENST00000544454 GGTLC3B5MD39 225 aa9.81□□□□□ -0.84
LTBR-213ENST00000544454 C11orf94C9JXX5 98 aa9.81□□□□□ -0.84
LTBR-213ENST00000544454 K7EQM0 130 aa9.81□□□□□ -0.84
LTBR-213ENST00000544454 TCRAP04437 139 aa9.81□□□□□ -0.84
LTBR-213ENST00000544454 PRM2P04554 102 aa9.81□□□□□ -0.84
LTBR-213ENST00000544454 HTN1P15515 57 aa9.81□□□□□ -0.84
LTBR-213ENST00000544454 AZU1P20160 251 aa9.81□□□□□ -0.84
LTBR-213ENST00000544454 GNG5P63218 68 aa9.81□□□□□ -0.84
LTBR-213ENST00000544454 C12orf74Q32Q52 190 aa9.81□□□□□ -0.84
LTBR-213ENST00000544454 Q8TAT8 98 aa9.81□□□□□ -0.84
LTBR-213ENST00000544454 SFT2D1Q8WV19 159 aa9.81□□□□□ -0.84
LTBR-213ENST00000544454 PYGO2Q9BRQ0 406 aa9.81□□□□□ -0.84
LTBR-213ENST00000544454 DKK2Q9UBU2 259 aa9.81□□□□□ -0.84
LTBR-213ENST00000544454 RPH3ALQ9UNE2 315 aa9.81□□□□□ -0.84
LTBR-213ENST00000544454 CELA1Q9UNI1 258 aa9.81□□□□□ -0.84
LTBR-213ENST00000544454 KLK5Q9Y337 293 aaPredicted RBP9.81□□□□□ -0.84
LTBR-213ENST00000544454 YTHDF2Q9Y5A9 579 aaKnown RBP9.81□□□□□ -0.84
LTBR-213ENST00000544454 DYNC2H1Q8NCM8 4307 aaKnown RBP9.81□□□□□ -0.84
LTBR-213ENST00000544454 FAM74A7A6NL05 159 aa9.8□□□□□ -0.84
LTBR-213ENST00000544454 H2AFB1P0C5Y9 115 aa9.8□□□□□ -0.84
LTBR-213ENST00000544454 BTN1A1Q13410 526 aa9.8□□□□□ -0.84
LTBR-213ENST00000544454 FAM222AQ5U5X8 452 aa9.8□□□□□ -0.84
LTBR-213ENST00000544454 CCDC28AQ8IWP9 274 aa9.8□□□□□ -0.84
LTBR-213ENST00000544454 C16orf74Q96GX8 76 aa9.8□□□□□ -0.84
LTBR-213ENST00000544454 LINC00467Q9BRT7 94 aa9.8□□□□□ -0.84
LTBR-213ENST00000544454 PLECQ15149 4684 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms