RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 LGALS9BQ3B8N2 356 aa7□□□□□ -1.29
VPS13D-212ENST00000543766 ZFP2Q6ZN57 461 aa7□□□□□ -1.29
VPS13D-212ENST00000543766 IL36BQ9NZH7 164 aa7□□□□□ -1.29
VPS13D-212ENST00000543766 THADAQ6YHU6 1953 aa7□□□□□ -1.29
VPS13D-212ENST00000543766 CADP27708 2225 aa7□□□□□ -1.29
VPS13D-212ENST00000543766 LINC01553A4QN01 128 aa7□□□□□ -1.29
VPS13D-212ENST00000543766 FXYD3Q14802 87 aa7□□□□□ -1.29
VPS13D-212ENST00000543766 RSPO4Q2I0M5 234 aaPredicted RBP7□□□□□ -1.29
VPS13D-212ENST00000543766 FAM19A3Q7Z5A8 133 aa7□□□□□ -1.29
VPS13D-212ENST00000543766 MARCH3Q86UD3 253 aa7□□□□□ -1.29
VPS13D-212ENST00000543766 TTTY13Q9BZ97 58 aa7□□□□□ -1.29
VPS13D-212ENST00000543766 NACAE9PAV3 2078 aa7□□□□□ -1.29
VPS13D-212ENST00000543766 DOCK10Q96BY6 2186 aa6.99□□□□□ -1.29
VPS13D-212ENST00000543766 SLC25A16P16260 332 aa6.99□□□□□ -1.29
VPS13D-212ENST00000543766 ESM1Q9NQ30 184 aa6.99□□□□□ -1.29
VPS13D-212ENST00000543766 TMEM74BQ9NUR3 256 aa6.99□□□□□ -1.29
VPS13D-212ENST00000543766 LGALS9O00182 355 aa6.99□□□□□ -1.29
VPS13D-212ENST00000543766 ATOX1O00244 68 aa6.99□□□□□ -1.29
VPS13D-212ENST00000543766 STATHP02808 62 aa6.99□□□□□ -1.29
VPS13D-212ENST00000543766 EFNA4P52798 201 aa6.99□□□□□ -1.29
VPS13D-212ENST00000543766 LY6G5CQ5SRR4 150 aa6.99□□□□□ -1.29
VPS13D-212ENST00000543766 LGALS9CQ6DKI2 356 aa6.99□□□□□ -1.29
VPS13D-212ENST00000543766 Q8N1Y9 231 aa6.99□□□□□ -1.29
VPS13D-212ENST00000543766 SPTSSBQ8NFR3 76 aa6.99□□□□□ -1.29
VPS13D-212ENST00000543766 ZNF524Q96C55 264 aa6.99□□□□□ -1.29
VPS13D-212ENST00000543766 LINC00474Q9P2X8 69 aa6.99□□□□□ -1.29
VPS13D-212ENST00000543766 ADAMTS9Q9P2N4 1935 aa6.99□□□□□ -1.29
VPS13D-212ENST00000543766 IGHV1-45A0A0A0MS14 117 aa6.99□□□□□ -1.29
VPS13D-212ENST00000543766 Q1RN00 199 aa6.99□□□□□ -1.29
VPS13D-212ENST00000543766 SPRNQ5BIV9 151 aa6.99□□□□□ -1.29
VPS13D-212ENST00000543766 DCTN5Q9BTE1 182 aa6.99□□□□□ -1.29
VPS13D-212ENST00000543766 CACNA1GO43497 2377 aa6.98□□□□□ -1.29
VPS13D-212ENST00000543766 LINC01549A6NIU2 74 aa6.98□□□□□ -1.29
VPS13D-212ENST00000543766 MFAP2P55001 183 aa6.98□□□□□ -1.29
VPS13D-212ENST00000543766 H1FXQ92522 213 aaKnown RBP6.98□□□□□ -1.29
VPS13D-212ENST00000543766 TRAV9-1A0A075B6T8 112 aa6.98□□□□□ -1.29
VPS13D-212ENST00000543766 UBE2L5PA0A1B0GUS4 154 aa6.98□□□□□ -1.29
VPS13D-212ENST00000543766 LYRM9A8MSI8 78 aa6.98□□□□□ -1.29
VPS13D-212ENST00000543766 NPPCP23582 126 aa6.98□□□□□ -1.29
VPS13D-212ENST00000543766 FREM2Q5SZK8 3169 aa6.98□□□□□ -1.29
VPS13D-212ENST00000543766 K7ENP7 123 aa6.98□□□□□ -1.29
VPS13D-212ENST00000543766 ZNF883P0CG24 379 aa6.98□□□□□ -1.29
VPS13D-212ENST00000543766 PEBP1P30086 187 aaKnown RBP6.98□□□□□ -1.29
VPS13D-212ENST00000543766 ZNF799Q96GE5 643 aa6.98□□□□□ -1.29
VPS13D-212ENST00000543766 ASPMQ8IZT6 3477 aa6.97□□□□□ -1.29
VPS13D-212ENST00000543766 TCRBV4S1A1TA0A5B7 111 aa6.97□□□□□ -1.29
VPS13D-212ENST00000543766 ZNF138P52744 262 aa6.97□□□□□ -1.29
VPS13D-212ENST00000543766 TEPPQ6URK8 271 aa6.97□□□□□ -1.29
VPS13D-212ENST00000543766 VN1R4Q7Z5H5 301 aa6.97□□□□□ -1.29
VPS13D-212ENST00000543766 COX14Q96I36 57 aa6.97□□□□□ -1.29
VPS13D-212ENST00000543766 ODF3Q96PU9 254 aa6.97□□□□□ -1.29
VPS13D-212ENST00000543766 CYSTM1Q9H1C7 97 aa6.97□□□□□ -1.29
VPS13D-212ENST00000543766 TRAV17A0A0B4J275 112 aa6.97□□□□□ -1.29
VPS13D-212ENST00000543766 TEX49A0A1B0GTD5 131 aa6.97□□□□□ -1.29
VPS13D-212ENST00000543766 LY6LH3BQJ8 138 aa6.97□□□□□ -1.29
VPS13D-212ENST00000543766 SCRG1O75711 98 aa6.97□□□□□ -1.29
VPS13D-212ENST00000543766 RPL30P62888 115 aaKnown RBP6.97□□□□□ -1.29
VPS13D-212ENST00000543766 NEXN-AS1Q8NBZ9 246 aa6.97□□□□□ -1.29
VPS13D-212ENST00000543766 FOXQ1Q9C009 403 aa6.97□□□□□ -1.29
VPS13D-212ENST00000543766 SERP1Q9Y6X1 66 aa6.97□□□□□ -1.29
VPS13D-212ENST00000543766 TMEM256-PLSCR3K7ERE1 68 aa6.97□□□□□ -1.29
VPS13D-212ENST00000543766 COPS9Q8WXC6 57 aa6.97□□□□□ -1.29
VPS13D-212ENST00000543766 C2orf16Q68DN1 1984 aa6.97□□□□□ -1.29
VPS13D-212ENST00000543766 RBMY1FQ15415 496 aaKnown RBP6.96□□□□□ -1.29
VPS13D-212ENST00000543766 PIEZO1Q92508 2521 aa6.96□□□□□ -1.29
VPS13D-212ENST00000543766 MYOFQ9NZM1 2061 aa6.96□□□□□ -1.29
VPS13D-212ENST00000543766 IGHG1P01857 330 aa6.96□□□□□ -1.3
VPS13D-212ENST00000543766 SERF2P84101 59 aa6.96□□□□□ -1.3
VPS13D-212ENST00000543766 H3BMM0 161 aa6.96□□□□□ -1.3
VPS13D-212ENST00000543766 IGHV4-39P01824 125 aa6.96□□□□□ -1.3
VPS13D-212ENST00000543766 FREM3P0C091 2139 aa6.95□□□□□ -1.3
VPS13D-212ENST00000543766 HBBP68871 147 aa6.95□□□□□ -1.3
VPS13D-212ENST00000543766 SRXN1Q9BYN0 137 aa6.95□□□□□ -1.3
VPS13D-212ENST00000543766 TANC2Q9HCD6 1990 aa6.95□□□□□ -1.3
VPS13D-212ENST00000543766 GPR179Q6PRD1 2367 aa6.95□□□□□ -1.3
VPS13D-212ENST00000543766 UBE2L6O14933 153 aa6.95□□□□□ -1.3
VPS13D-212ENST00000543766 IGKV1D-33P01593 117 aa6.95□□□□□ -1.3
VPS13D-212ENST00000543766 IGKV1-33P01594 117 aa6.95□□□□□ -1.3
VPS13D-212ENST00000543766 UBE2WQ96B02 151 aa6.95□□□□□ -1.3
VPS13D-212ENST00000543766 SLC25A15Q9Y619 301 aa6.95□□□□□ -1.3
VPS13D-212ENST00000543766 F5P12259 2224 aa6.95□□□□□ -1.3
VPS13D-212ENST00000543766 IGKV1-9A0A0C4DH69 117 aa6.95□□□□□ -1.3
VPS13D-212ENST00000543766 LINC01565O15544 149 aa6.94□□□□□ -1.3
VPS13D-212ENST00000543766 FXYD4P59646 89 aa6.94□□□□□ -1.3
VPS13D-212ENST00000543766 FAM223AQ8IWN6 122 aa6.94□□□□□ -1.3
VPS13D-212ENST00000543766 ZNF525Q8N782 197 aa6.94□□□□□ -1.3
VPS13D-212ENST00000543766 SLC25A2Q9BXI2 301 aa6.94□□□□□ -1.3
VPS13D-212ENST00000543766 LTAP01374 205 aa6.94□□□□□ -1.3
VPS13D-212ENST00000543766 TMEM170BQ5T4T1 132 aa6.94□□□□□ -1.3
VPS13D-212ENST00000543766 Q6ZS92 163 aa6.94□□□□□ -1.3
VPS13D-212ENST00000543766 UNQ9165/PRO28630Q6UXU0 137 aa6.94□□□□□ -1.3
VPS13D-212ENST00000543766 C20orf197Q8N268 126 aa6.94□□□□□ -1.3
VPS13D-212ENST00000543766 RPP25LQ8N5L8 163 aaKnown RBP6.94□□□□□ -1.3
VPS13D-212ENST00000543766 LHFPL6Q9Y693 200 aa6.94□□□□□ -1.3
VPS13D-212ENST00000543766 FREM1Q5H8C1 2179 aa6.93□□□□□ -1.3
VPS13D-212ENST00000543766 TPRP12270 2363 aaKnown RBP6.93□□□□□ -1.3
VPS13D-212ENST00000543766 IGHV1-24A0A0C4DH33 117 aa6.93□□□□□ -1.3
VPS13D-212ENST00000543766 IGLV3-1P01715 115 aa6.93□□□□□ -1.3
VPS13D-212ENST00000543766 CXCL5P42830 114 aa6.93□□□□□ -1.3
VPS13D-212ENST00000543766 MLANAQ16655 118 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms