RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 M0QZ24 198 aa10.74□□□□□ -0.69
MSH2-206ENST00000543555 TPPP3Q9BW30 176 aa10.74□□□□□ -0.69
MSH2-206ENST00000543555 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.74□□□□□ -0.69
MSH2-206ENST00000543555 CHCHD1Q96BP2 118 aaKnown RBP10.74□□□□□ -0.69
MSH2-206ENST00000543555 LINC00527Q9UJ94 153 aa10.74□□□□□ -0.69
MSH2-206ENST00000543555 IGHV3-66A0A0C4DH42 116 aa10.73□□□□□ -0.69
MSH2-206ENST00000543555 ITPR3Q14573 2671 aa10.73□□□□□ -0.69
MSH2-206ENST00000543555 SETXQ7Z333 2677 aaKnown RBP10.73□□□□□ -0.69
MSH2-206ENST00000543555 TMSB15BA0A087X1C1 80 aa10.73□□□□□ -0.69
MSH2-206ENST00000543555 FAM223BA6NKX1 122 aa10.73□□□□□ -0.69
MSH2-206ENST00000543555 EBLN2Q6P2I7 272 aa10.73□□□□□ -0.69
MSH2-206ENST00000543555 FAM223AQ8IWN6 122 aa10.73□□□□□ -0.69
MSH2-206ENST00000543555 METTL26Q96S19 204 aa10.73□□□□□ -0.69
MSH2-206ENST00000543555 MIEN1Q9BRT3 115 aa10.73□□□□□ -0.69
MSH2-206ENST00000543555 SONP18583 2426 aaKnown RBP10.73□□□□□ -0.69
MSH2-206ENST00000543555 EREGO14944 169 aa10.72□□□□□ -0.69
MSH2-206ENST00000543555 ATP6V0BQ99437 205 aa10.72□□□□□ -0.69
MSH2-206ENST00000543555 SLC50A1Q9BRV3 221 aa10.72□□□□□ -0.69
MSH2-206ENST00000543555 A0A1B0GV90 55 aa10.72□□□□□ -0.69
MSH2-206ENST00000543555 MSMBP08118 114 aa10.72□□□□□ -0.69
MSH2-206ENST00000543555 ZNF80P51504 273 aaPredicted RBP10.72□□□□□ -0.69
MSH2-206ENST00000543555 LYZL1Q6UWQ5 148 aa10.72□□□□□ -0.69
MSH2-206ENST00000543555 CREBBPQ92793 2442 aa10.72□□□□□ -0.69
MSH2-206ENST00000543555 MYO9AB2RTY4 2548 aa10.72□□□□□ -0.69
MSH2-206ENST00000543555 PDZD2O15018 2839 aa10.72□□□□□ -0.69
MSH2-206ENST00000543555 IGHV3OR16-13A0A075B7E8 117 aa10.71□□□□□ -0.69
MSH2-206ENST00000543555 IGHV3-74A0A0B4J1X5 117 aa10.71□□□□□ -0.69
MSH2-206ENST00000543555 C2orf70A6NJV1 201 aa10.71□□□□□ -0.69
MSH2-206ENST00000543555 LINC00614P0C842 121 aa10.71□□□□□ -0.69
MSH2-206ENST00000543555 BMI1P35226 326 aa10.71□□□□□ -0.69
MSH2-206ENST00000543555 CTRLP40313 264 aa10.71□□□□□ -0.69
MSH2-206ENST00000543555 PRAC2D3DTV9 90 aa10.71□□□□□ -0.69
MSH2-206ENST00000543555 ZNF207O43670 478 aaKnown RBP10.71□□□□□ -0.69
MSH2-206ENST00000543555 TRGV3P03979 118 aa10.71□□□□□ -0.69
MSH2-206ENST00000543555 BTF3P20290 206 aaKnown RBP10.71□□□□□ -0.69
MSH2-206ENST00000543555 PMCHL1Q16048 86 aa10.71□□□□□ -0.69
MSH2-206ENST00000543555 ZNF705AQ6ZN79 300 aaPredicted RBP10.71□□□□□ -0.69
MSH2-206ENST00000543555 ZNF493Q6ZR52 646 aa10.71□□□□□ -0.69
MSH2-206ENST00000543555 SNHG12Q9BXW3 62 aa10.71□□□□□ -0.69
MSH2-206ENST00000543555 U3KQE9 123 aa10.71□□□□□ -0.69
MSH2-206ENST00000543555 IGHV3-49A0A0A0MS15 119 aa10.71□□□□□ -0.7
MSH2-206ENST00000543555 IGHV1-24A0A0C4DH33 117 aa10.71□□□□□ -0.7
MSH2-206ENST00000543555 IGF1P05019 195 aa10.71□□□□□ -0.7
MSH2-206ENST00000543555 LY6EQ16553 131 aa10.71□□□□□ -0.7
MSH2-206ENST00000543555 RNF182Q8N6D2 247 aa10.71□□□□□ -0.7
MSH2-206ENST00000543555 FLNAP21333 2647 aaKnown RBP10.7□□□□□ -0.7
MSH2-206ENST00000543555 SPATA45Q537H7 98 aa10.7□□□□□ -0.7
MSH2-206ENST00000543555 CLEC5AQ9NY25 188 aa10.7□□□□□ -0.7
MSH2-206ENST00000543555 RBAKDNA6NC62 111 aa10.7□□□□□ -0.7
MSH2-206ENST00000543555 A6NDX4 124 aa10.7□□□□□ -0.7
MSH2-206ENST00000543555 H3BUX3 64 aa10.7□□□□□ -0.7
MSH2-206ENST00000543555 RPS20P60866 119 aaKnown RBP10.7□□□□□ -0.7
MSH2-206ENST00000543555 ERCC8Q13216 396 aa10.7□□□□□ -0.7
MSH2-206ENST00000543555 DMRTA1Q5VZB9 504 aa10.7□□□□□ -0.7
MSH2-206ENST00000543555 M0R143 59 aa10.69□□□□□ -0.7
MSH2-206ENST00000543555 RAB4AP20338 218 aa10.69□□□□□ -0.7
MSH2-206ENST00000543555 ZMAT5Q9UDW3 170 aaKnown RBP10.69□□□□□ -0.7
MSH2-206ENST00000543555 ZNF138P52744 262 aa10.69□□□□□ -0.7
MSH2-206ENST00000543555 TRAV8-2A0A0B4J237 113 aa10.68□□□□□ -0.7
MSH2-206ENST00000543555 TMEM213A2RRL7 107 aa10.68□□□□□ -0.7
MSH2-206ENST00000543555 IGHG2P01859 326 aa10.68□□□□□ -0.7
MSH2-206ENST00000543555 SRSF2Q01130 221 aaKnown RBP10.68□□□□□ -0.7
MSH2-206ENST00000543555 ARL3P36405 182 aa10.68□□□□□ -0.7
MSH2-206ENST00000543555 C8orf86Q6ZUL3 223 aa10.68□□□□□ -0.7
MSH2-206ENST00000543555 ATOH7Q8N100 152 aa10.68□□□□□ -0.7
MSH2-206ENST00000543555 TMEM70Q9BUB7 260 aa10.68□□□□□ -0.7
MSH2-206ENST00000543555 HIF1ANQ9NWT6 349 aa10.68□□□□□ -0.7
MSH2-206ENST00000543555 CSN3P07498 182 aa10.68□□□□□ -0.7
MSH2-206ENST00000543555 IGLC6P0CF74 106 aa10.68□□□□□ -0.7
MSH2-206ENST00000543555 PPIFP30405 207 aaKnown RBP10.68□□□□□ -0.7
MSH2-206ENST00000543555 SSTP61278 116 aa10.68□□□□□ -0.7
MSH2-206ENST00000543555 CYB5R2Q6BCY4 276 aa10.68□□□□□ -0.7
MSH2-206ENST00000543555 FER1L6-AS1Q8NA97 138 aa10.68□□□□□ -0.7
MSH2-206ENST00000543555 MRPL53Q96EL3 112 aaKnown RBP10.68□□□□□ -0.7
MSH2-206ENST00000543555 FABP5P3A8MUU1 101 aa10.67□□□□□ -0.7
MSH2-206ENST00000543555 B4DSR2 109 aa10.67□□□□□ -0.7
MSH2-206ENST00000543555 LEPROTL1O95214 131 aa10.67□□□□□ -0.7
MSH2-206ENST00000543555 BRI3O95415 125 aa10.67□□□□□ -0.7
MSH2-206ENST00000543555 ZNF575Q86XF7 245 aa10.67□□□□□ -0.7
MSH2-206ENST00000543555 M0QZK8 103 aa10.67□□□□□ -0.7
MSH2-206ENST00000543555 SPATA12Q7Z6I5 190 aa10.67□□□□□ -0.7
MSH2-206ENST00000543555 MRPL52Q86TS9 123 aaKnown RBP10.67□□□□□ -0.7
MSH2-206ENST00000543555 BAHCC1Q9P281 2608 aa10.66□□□□□ -0.7
MSH2-206ENST00000543555 H3BUA1 57 aa10.66□□□□□ -0.7
MSH2-206ENST00000543555 ORM1P02763 201 aa10.66□□□□□ -0.7
MSH2-206ENST00000543555 OR5AL1P0C617 328 aa10.66□□□□□ -0.7
MSH2-206ENST00000543555 FAM104BQ5XKR9 115 aa10.66□□□□□ -0.7
MSH2-206ENST00000543555 LINC00173Q6ZV60 143 aa10.66□□□□□ -0.7
MSH2-206ENST00000543555 IL17RELQ6ZVW7 336 aa10.66□□□□□ -0.7
MSH2-206ENST00000543555 LINC00469Q8N7U9 141 aa10.66□□□□□ -0.7
MSH2-206ENST00000543555 AGPAT4-IT1Q9H0P7 198 aa10.66□□□□□ -0.7
MSH2-206ENST00000543555 MUC21A0A0G2JKD1 596 aa10.66□□□□□ -0.7
MSH2-206ENST00000543555 MUC21A0A140T8X8 626 aa10.66□□□□□ -0.7
MSH2-206ENST00000543555 CRXO43186 299 aaPredicted RBP10.66□□□□□ -0.7
MSH2-206ENST00000543555 AVPP01185 164 aa10.66□□□□□ -0.7
MSH2-206ENST00000543555 TRBV12-3P01733 135 aa10.66□□□□□ -0.7
MSH2-206ENST00000543555 DSCR9P59020 149 aa10.66□□□□□ -0.7
MSH2-206ENST00000543555 MUC21Q5SSG8 566 aa10.66□□□□□ -0.7
MSH2-206ENST00000543555 AMN1Q8IY45 258 aa10.66□□□□□ -0.7
MSH2-206ENST00000543555 GLMPQ8WWB7 406 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms