RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 CRXO43186 299 aaPredicted RBP6.97□□□□□ -1.29
TNFRSF1A-214ENST00000543048 INSP01308 110 aa6.97□□□□□ -1.29
TNFRSF1A-214ENST00000543048 RAB14P61106 215 aa6.97□□□□□ -1.29
TNFRSF1A-214ENST00000543048 SPINK13Q1W4C9 94 aa6.97□□□□□ -1.29
TNFRSF1A-214ENST00000543048 DPPA3Q6W0C5 159 aa6.97□□□□□ -1.29
TNFRSF1A-214ENST00000543048 TMEM14CQ9P0S9 112 aa6.97□□□□□ -1.29
TNFRSF1A-214ENST00000543048 APLNQ9ULZ1 77 aa6.97□□□□□ -1.29
TNFRSF1A-214ENST00000543048 VPS13DQ5THJ4 4388 aa6.97□□□□□ -1.29
TNFRSF1A-214ENST00000543048 DEFB131BA0A096LNP1 70 aa6.96□□□□□ -1.3
TNFRSF1A-214ENST00000543048 TEX48A0A1B0GUV7 120 aa6.96□□□□□ -1.3
TNFRSF1A-214ENST00000543048 LOC102723971A0A1B0GUV8 181 aa6.96□□□□□ -1.3
TNFRSF1A-214ENST00000543048 SLC17A3O00476 420 aa6.96□□□□□ -1.3
TNFRSF1A-214ENST00000543048 MBP02144 154 aa6.96□□□□□ -1.3
TNFRSF1A-214ENST00000543048 NMBP08949 121 aa6.96□□□□□ -1.3
TNFRSF1A-214ENST00000543048 HIST1H1EP10412 219 aaKnown RBP6.96□□□□□ -1.3
TNFRSF1A-214ENST00000543048 CLLU1Q5K131 121 aa6.96□□□□□ -1.3
TNFRSF1A-214ENST00000543048 FFAR4Q5NUL3 377 aa6.96□□□□□ -1.3
TNFRSF1A-214ENST00000543048 OR10J6PQ8NGY7 276 aa6.96□□□□□ -1.3
TNFRSF1A-214ENST00000543048 ZNF586Q9NXT0 402 aa6.96□□□□□ -1.3
TNFRSF1A-214ENST00000543048 DKK2Q9UBU2 259 aa6.96□□□□□ -1.3
TNFRSF1A-214ENST00000543048 DNAH6Q9C0G6 4158 aa6.95□□□□□ -1.3
TNFRSF1A-214ENST00000543048 TRBV19A0A075B6N1 114 aa6.95□□□□□ -1.3
TNFRSF1A-214ENST00000543048 TRAV12-2A0A075B6T6 113 aa6.95□□□□□ -1.3
TNFRSF1A-214ENST00000543048 ZNF705GA8MUZ8 300 aaPredicted RBP6.95□□□□□ -1.3
TNFRSF1A-214ENST00000543048 PRAC2D3DTV9 90 aa6.95□□□□□ -1.3
TNFRSF1A-214ENST00000543048 ZNF253O75346 499 aa6.95□□□□□ -1.3
TNFRSF1A-214ENST00000543048 PRB4P10163 310 aaPredicted RBP6.95□□□□□ -1.3
TNFRSF1A-214ENST00000543048 M6PRP20645 277 aa6.95□□□□□ -1.3
TNFRSF1A-214ENST00000543048 TSPOP30536 169 aa6.95□□□□□ -1.3
TNFRSF1A-214ENST00000543048 CDKN1BP46527 198 aa6.95□□□□□ -1.3
TNFRSF1A-214ENST00000543048 RAB2AP61019 212 aa6.95□□□□□ -1.3
TNFRSF1A-214ENST00000543048 BLOC1S1P78537 153 aa6.95□□□□□ -1.3
TNFRSF1A-214ENST00000543048 ACOT6Q3I5F7 207 aaPredicted RBP6.95□□□□□ -1.3
TNFRSF1A-214ENST00000543048 GCSAMLQ5JQS6 135 aa6.95□□□□□ -1.3
TNFRSF1A-214ENST00000543048 FAM222AQ5U5X8 452 aa6.95□□□□□ -1.3
TNFRSF1A-214ENST00000543048 TMEM256Q8N2U0 113 aa6.95□□□□□ -1.3
TNFRSF1A-214ENST00000543048 FAM213BQ8TBF2 198 aa6.95□□□□□ -1.3
TNFRSF1A-214ENST00000543048 LINC01587Q99440 93 aa6.95□□□□□ -1.3
TNFRSF1A-214ENST00000543048 NIPSNAP3BQ9BS92 247 aa6.95□□□□□ -1.3
TNFRSF1A-214ENST00000543048 PRELID1Q9Y255 219 aa6.95□□□□□ -1.3
TNFRSF1A-214ENST00000543048 IGHV4-4A0A075B6R2 117 aa6.94□□□□□ -1.3
TNFRSF1A-214ENST00000543048 PRM2P04554 102 aa6.94□□□□□ -1.3
TNFRSF1A-214ENST00000543048 PYYP10082 97 aa6.94□□□□□ -1.3
TNFRSF1A-214ENST00000543048 PDE6HQ13956 83 aa6.94□□□□□ -1.3
TNFRSF1A-214ENST00000543048 MIR17HGQ75NE6 70 aa6.94□□□□□ -1.3
TNFRSF1A-214ENST00000543048 RPP25LQ8N5L8 163 aaKnown RBP6.94□□□□□ -1.3
TNFRSF1A-214ENST00000543048 PCNPQ8WW12 178 aaKnown RBP6.94□□□□□ -1.3
TNFRSF1A-214ENST00000543048 SLC25A2Q9BXI2 301 aa6.94□□□□□ -1.3
TNFRSF1A-214ENST00000543048 OR51M1Q9H341 326 aa6.94□□□□□ -1.3
TNFRSF1A-214ENST00000543048 YTHDF2Q9Y5A9 579 aaKnown RBP6.94□□□□□ -1.3
TNFRSF1A-214ENST00000543048 NDUFB4O95168 129 aa6.93□□□□□ -1.3
TNFRSF1A-214ENST00000543048 NBEAP1P0C6P0 100 aa6.93□□□□□ -1.3
TNFRSF1A-214ENST00000543048 CT45A10P0DMU9 189 aa6.93□□□□□ -1.3
TNFRSF1A-214ENST00000543048 AZU1P20160 251 aa6.93□□□□□ -1.3
TNFRSF1A-214ENST00000543048 CDC34P49427 236 aaPredicted RBP6.93□□□□□ -1.3
TNFRSF1A-214ENST00000543048 FHITP49789 147 aa6.93□□□□□ -1.3
TNFRSF1A-214ENST00000543048 TAS2R60P59551 318 aa6.93□□□□□ -1.3
TNFRSF1A-214ENST00000543048 FAM122CQ6P4D5 195 aa6.93□□□□□ -1.3
TNFRSF1A-214ENST00000543048 OR10G4Q8NGN3 311 aa6.93□□□□□ -1.3
TNFRSF1A-214ENST00000543048 OR10G9Q8NGN4 311 aa6.93□□□□□ -1.3
TNFRSF1A-214ENST00000543048 OR10G7Q8NGN6 311 aa6.93□□□□□ -1.3
TNFRSF1A-214ENST00000543048 BLNKQ8WV28 456 aa6.93□□□□□ -1.3
TNFRSF1A-214ENST00000543048 MRPL53Q96EL3 112 aaKnown RBP6.93□□□□□ -1.3
TNFRSF1A-214ENST00000543048 FAM167A-AS1Q96KT0 104 aa6.93□□□□□ -1.3
TNFRSF1A-214ENST00000543048 C20orf144Q9BQM9 153 aa6.93□□□□□ -1.3
TNFRSF1A-214ENST00000543048 PAXXQ9BUH6 204 aa6.93□□□□□ -1.3
TNFRSF1A-214ENST00000543048 MRPL32Q9BYC8 188 aaKnown RBP6.93□□□□□ -1.3
TNFRSF1A-214ENST00000543048 ACTR3CQ9C0K3 210 aaPredicted RBP6.93□□□□□ -1.3
TNFRSF1A-214ENST00000543048 FUT9Q9Y231 359 aa6.93□□□□□ -1.3
TNFRSF1A-214ENST00000543048 CTXND1A0A1B0GTU2 59 aa6.92□□□□□ -1.3
TNFRSF1A-214ENST00000543048 MAP1LC3B2A6NCE7 125 aa6.92□□□□□ -1.3
TNFRSF1A-214ENST00000543048 LYRM9A8MSI8 78 aa6.92□□□□□ -1.3
TNFRSF1A-214ENST00000543048 NPIPB6E9PJ23 425 aa6.92□□□□□ -1.3
TNFRSF1A-214ENST00000543048 TEX46H3BTG2 121 aa6.92□□□□□ -1.3
TNFRSF1A-214ENST00000543048 HTN1P15515 57 aa6.92□□□□□ -1.3
TNFRSF1A-214ENST00000543048 LEPP41159 167 aa6.92□□□□□ -1.3
TNFRSF1A-214ENST00000543048 DAD1P61803 113 aa6.92□□□□□ -1.3
TNFRSF1A-214ENST00000543048 ZNF726P1Q15940 193 aa6.92□□□□□ -1.3
TNFRSF1A-214ENST00000543048 FAM210BQ96KR6 192 aa6.92□□□□□ -1.3
TNFRSF1A-214ENST00000543048 LINC00477Q96M19 166 aa6.92□□□□□ -1.3
TNFRSF1A-214ENST00000543048 ODF3Q96PU9 254 aa6.92□□□□□ -1.3
TNFRSF1A-214ENST00000543048 NDUFAF3Q9BU61 184 aa6.92□□□□□ -1.3
TNFRSF1A-214ENST00000543048 MAP1LC3BQ9GZQ8 125 aa6.92□□□□□ -1.3
TNFRSF1A-214ENST00000543048 AAMDCQ9H7C9 122 aa6.92□□□□□ -1.3
TNFRSF1A-214ENST00000543048 NACAE9PAV3 2078 aa6.91□□□□□ -1.3
TNFRSF1A-214ENST00000543048 TRAV1-1A0A0B4J248 108 aa6.91□□□□□ -1.3
TNFRSF1A-214ENST00000543048 A0A1W2PPV4 95 aa6.91□□□□□ -1.3
TNFRSF1A-214ENST00000543048 LINC00862A6NCI5 91 aa6.91□□□□□ -1.3
TNFRSF1A-214ENST00000543048 H7BYZ3 331 aa6.91□□□□□ -1.3
TNFRSF1A-214ENST00000543048 M0R3E3 92 aa6.91□□□□□ -1.3
TNFRSF1A-214ENST00000543048 ERCC8Q13216 396 aa6.91□□□□□ -1.3
TNFRSF1A-214ENST00000543048 ICAM4Q14773 271 aa6.91□□□□□ -1.3
TNFRSF1A-214ENST00000543048 KIR3DS1Q14943 382 aa6.91□□□□□ -1.3
TNFRSF1A-214ENST00000543048 NDUFA5Q16718 116 aa6.91□□□□□ -1.3
TNFRSF1A-214ENST00000543048 ZNF493Q6ZR52 646 aa6.91□□□□□ -1.3
TNFRSF1A-214ENST00000543048 CCDC28AQ8IWP9 274 aa6.91□□□□□ -1.3
TNFRSF1A-214ENST00000543048 EXOC3-AS1Q8N2X6 119 aa6.91□□□□□ -1.3
TNFRSF1A-214ENST00000543048 LYPD6BQ8NI32 183 aa6.91□□□□□ -1.3
TNFRSF1A-214ENST00000543048 MBD3L1Q8WWY6 194 aa6.91□□□□□ -1.3
TNFRSF1A-214ENST00000543048 RAB24Q969Q5 203 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms