RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 CRXO43186 299 aaPredicted RBP4.3□□□□□ -1.72
ABCF1-207ENST00000542772 PDE6DO43924 150 aa4.3□□□□□ -1.72
ABCF1-207ENST00000542772 IFNA1P01562 189 aa4.3□□□□□ -1.72
ABCF1-207ENST00000542772 S100A9P06702 114 aaKnown RBP4.3□□□□□ -1.72
ABCF1-207ENST00000542772 ZNF705DP0CH99 300 aaPredicted RBP4.3□□□□□ -1.72
ABCF1-207ENST00000542772 ZNF705BP0CI00 300 aaPredicted RBP4.3□□□□□ -1.72
ABCF1-207ENST00000542772 BCL2P10415 239 aa4.3□□□□□ -1.72
ABCF1-207ENST00000542772 CRISP2P16562 243 aa4.3□□□□□ -1.72
ABCF1-207ENST00000542772 ZNF138P52744 262 aa4.3□□□□□ -1.72
ABCF1-207ENST00000542772 UBE2G2P60604 165 aa4.3□□□□□ -1.72
ABCF1-207ENST00000542772 NUTF2P61970 127 aaKnown RBP4.3□□□□□ -1.72
ABCF1-207ENST00000542772 DEFA6Q01524 100 aa4.3□□□□□ -1.72
ABCF1-207ENST00000542772 HAGHQ16775 308 aa4.3□□□□□ -1.72
ABCF1-207ENST00000542772 TMEM183BQ1AE95 376 aa4.3□□□□□ -1.72
ABCF1-207ENST00000542772 CST9LP1Q5W188 147 aa4.3□□□□□ -1.72
ABCF1-207ENST00000542772 STHQ8IWL8 128 aa4.3□□□□□ -1.72
ABCF1-207ENST00000542772 IQCF2Q8IXL9 164 aa4.3□□□□□ -1.72
ABCF1-207ENST00000542772 SLC7A5P1Q8MH63 180 aa4.3□□□□□ -1.72
ABCF1-207ENST00000542772 EIF4E3Q8N5X7 224 aaKnown RBP4.3□□□□□ -1.72
ABCF1-207ENST00000542772 CYB561D1Q8N8Q1 229 aa4.3□□□□□ -1.72
ABCF1-207ENST00000542772 TMEM75Q8N9X5 138 aa4.3□□□□□ -1.72
ABCF1-207ENST00000542772 OR10J6PQ8NGY7 276 aa4.3□□□□□ -1.72
ABCF1-207ENST00000542772 C2CD4CQ8TF44 421 aa4.3□□□□□ -1.72
ABCF1-207ENST00000542772 PCNPQ8WW12 178 aaKnown RBP4.3□□□□□ -1.72
ABCF1-207ENST00000542772 TVP23CQ96ET8 276 aa4.3□□□□□ -1.72
ABCF1-207ENST00000542772 VGLL1Q99990 258 aa4.3□□□□□ -1.72
ABCF1-207ENST00000542772 ATG101Q9BSB4 218 aa4.3□□□□□ -1.72
ABCF1-207ENST00000542772 SRD5A3Q9H8P0 318 aa4.3□□□□□ -1.72
ABCF1-207ENST00000542772 LINC00862A6NCI5 91 aa4.29□□□□□ -1.72
ABCF1-207ENST00000542772 KLLNB2CW77 178 aa4.29□□□□□ -1.72
ABCF1-207ENST00000542772 K7EQM0 130 aa4.29□□□□□ -1.72
ABCF1-207ENST00000542772 PEX7O00628 323 aa4.29□□□□□ -1.72
ABCF1-207ENST00000542772 ZNF324O75467 553 aaPredicted RBP4.29□□□□□ -1.72
ABCF1-207ENST00000542772 AMBPP02760 352 aa4.29□□□□□ -1.72
ABCF1-207ENST00000542772 PRB2P02812 416 aaPredicted RBP4.29□□□□□ -1.72
ABCF1-207ENST00000542772 SRP19P09132 144 aaKnown RBP4.29□□□□□ -1.72
ABCF1-207ENST00000542772 FRMD6-AS1P0C7T7 363 aa4.29□□□□□ -1.72
ABCF1-207ENST00000542772 CDKN1BP46527 198 aa4.29□□□□□ -1.72
ABCF1-207ENST00000542772 TAS2R60P59551 318 aa4.29□□□□□ -1.72
ABCF1-207ENST00000542772 GNG5P63218 68 aa4.29□□□□□ -1.72
ABCF1-207ENST00000542772 FLI1Q01543 452 aaPredicted RBP4.29□□□□□ -1.72
ABCF1-207ENST00000542772 HIST1H1AQ02539 215 aaPredicted RBP4.29□□□□□ -1.72
ABCF1-207ENST00000542772 ERCC8Q13216 396 aa4.29□□□□□ -1.72
ABCF1-207ENST00000542772 DEFB121Q5J5C9 76 aa4.29□□□□□ -1.72
ABCF1-207ENST00000542772 SAPCD1Q5SSQ6 148 aa4.29□□□□□ -1.72
ABCF1-207ENST00000542772 TMEM78Q5T7P6 136 aa4.29□□□□□ -1.72
ABCF1-207ENST00000542772 GOLT1AQ6ZVE7 132 aa4.29□□□□□ -1.72
ABCF1-207ENST00000542772 Q6ZWC4 215 aa4.29□□□□□ -1.72
ABCF1-207ENST00000542772 OR4B1Q8NGF8 309 aa4.29□□□□□ -1.72
ABCF1-207ENST00000542772 LINC00479Q96M42 142 aa4.29□□□□□ -1.72
ABCF1-207ENST00000542772 MLST8Q9BVC4 326 aa4.29□□□□□ -1.72
ABCF1-207ENST00000542772 TUBA4BQ9H853 241 aa4.29□□□□□ -1.72
ABCF1-207ENST00000542772 PSG8Q9UQ74 426 aa4.29□□□□□ -1.72
ABCF1-207ENST00000542772 ZFP30Q9Y2G7 519 aa4.29□□□□□ -1.72
ABCF1-207ENST00000542772 IGKV2-40A0A087WW87 121 aaPredicted RBP4.28□□□□□ -1.72
ABCF1-207ENST00000542772 TRAV8-1A0A0A6YYK1 113 aa4.28□□□□□ -1.72
ABCF1-207ENST00000542772 IGKV2D-40P01614 121 aaPredicted RBP4.28□□□□□ -1.72
ABCF1-207ENST00000542772 TSPOP30536 169 aa4.28□□□□□ -1.72
ABCF1-207ENST00000542772 APOC4P55056 127 aa4.28□□□□□ -1.72
ABCF1-207ENST00000542772 SRSF3P84103 164 aaKnown RBP4.28□□□□□ -1.72
ABCF1-207ENST00000542772 PEA15Q15121 130 aa4.28□□□□□ -1.72
ABCF1-207ENST00000542772 SBSPONQ8IVN8 264 aa4.28□□□□□ -1.72
ABCF1-207ENST00000542772 ZFAND2AQ8N6M9 145 aa4.28□□□□□ -1.72
ABCF1-207ENST00000542772 RNF183Q96D59 192 aa4.28□□□□□ -1.72
ABCF1-207ENST00000542772 SMIM12Q96EX1 92 aa4.28□□□□□ -1.72
ABCF1-207ENST00000542772 FMC1Q96HJ9 113 aa4.28□□□□□ -1.72
ABCF1-207ENST00000542772 IGF2BP2-AS1Q96M15 143 aa4.28□□□□□ -1.72
ABCF1-207ENST00000542772 C20orf144Q9BQM9 153 aa4.28□□□□□ -1.72
ABCF1-207ENST00000542772 C1QTNF4Q9BXJ3 329 aa4.28□□□□□ -1.72
ABCF1-207ENST00000542772 EIF5A2Q9GZV4 153 aaKnown RBP4.28□□□□□ -1.72
ABCF1-207ENST00000542772 SLC35B3Q9H1N7 401 aa4.28□□□□□ -1.72
ABCF1-207ENST00000542772 TP53TG1Q9Y2A0 90 aa4.28□□□□□ -1.72
ABCF1-207ENST00000542772 MEGF8Q7Z7M0 2845 aa4.28□□□□□ -1.72
ABCF1-207ENST00000542772 DNAH9Q9NYC9 4486 aa4.27□□□□□ -1.73
ABCF1-207ENST00000542772 TRAV34A0A0B4J273 112 aa4.27□□□□□ -1.73
ABCF1-207ENST00000542772 SCO2A0A1W2PP80 73 aa4.27□□□□□ -1.73
ABCF1-207ENST00000542772 C9JQL5 133 aa4.27□□□□□ -1.73
ABCF1-207ENST00000542772 LTAP01374 205 aa4.27□□□□□ -1.73
ABCF1-207ENST00000542772 IGKV3-20P01619 116 aa4.27□□□□□ -1.73
ABCF1-207ENST00000542772 IGLV2-8P01709 118 aa4.27□□□□□ -1.73
ABCF1-207ENST00000542772 PRB4P10163 310 aaPredicted RBP4.27□□□□□ -1.73
ABCF1-207ENST00000542772 RPL35AP18077 110 aaKnown RBP4.27□□□□□ -1.73
ABCF1-207ENST00000542772 LEPP41159 167 aa4.27□□□□□ -1.73
ABCF1-207ENST00000542772 RPL35P42766 123 aaKnown RBP4.27□□□□□ -1.73
ABCF1-207ENST00000542772 CRIP1P50238 77 aa4.27□□□□□ -1.73
ABCF1-207ENST00000542772 KIR3DS1Q14943 382 aa4.27□□□□□ -1.73
ABCF1-207ENST00000542772 TOR2AQ5JU69 321 aa4.27□□□□□ -1.73
ABCF1-207ENST00000542772 Q6AWC8 147 aa4.27□□□□□ -1.73
ABCF1-207ENST00000542772 UQCC3Q6UW78 93 aa4.27□□□□□ -1.73
ABCF1-207ENST00000542772 ZNF705AQ6ZN79 300 aaPredicted RBP4.27□□□□□ -1.73
ABCF1-207ENST00000542772 ZNF575Q86XF7 245 aa4.27□□□□□ -1.73
ABCF1-207ENST00000542772 TMEM183AQ8IXX5 376 aa4.27□□□□□ -1.73
ABCF1-207ENST00000542772 C1orf158Q8N1D5 194 aa4.27□□□□□ -1.73
ABCF1-207ENST00000542772 MRAPQ8TCY5 172 aa4.27□□□□□ -1.73
ABCF1-207ENST00000542772 SGK494Q96LW2 274 aa4.27□□□□□ -1.73
ABCF1-207ENST00000542772 NEU1Q99519 415 aa4.27□□□□□ -1.73
ABCF1-207ENST00000542772 B9D2Q9BPU9 175 aa4.27□□□□□ -1.73
ABCF1-207ENST00000542772 TM2D3Q9BRN9 247 aa4.27□□□□□ -1.73
ABCF1-207ENST00000542772 LINC00467Q9BRT7 94 aa4.27□□□□□ -1.73
ABCF1-207ENST00000542772 TREM1Q9NP99 234 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms