RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 DEFB104AQ8WTQ1 72 aa10.61□□□□□ -0.71
BNIP3-202ENST00000540159 PRR25Q96S07 402 aa10.61□□□□□ -0.71
BNIP3-202ENST00000540159 CKS2P33552 79 aa10.61□□□□□ -0.71
BNIP3-202ENST00000540159 FAM162BQ5T6X4 162 aa10.61□□□□□ -0.71
BNIP3-202ENST00000540159 ABCA12Q86UK0 2595 aa10.61□□□□□ -0.71
BNIP3-202ENST00000540159 NPYP01303 97 aa10.61□□□□□ -0.71
BNIP3-202ENST00000540159 NHLH1Q02575 133 aa10.61□□□□□ -0.71
BNIP3-202ENST00000540159 SLC25A34Q6PIV7 304 aa10.61□□□□□ -0.71
BNIP3-202ENST00000540159 IL17RELQ6ZVW7 336 aa10.61□□□□□ -0.71
BNIP3-202ENST00000540159 Q8N9W7 124 aa10.61□□□□□ -0.71
BNIP3-202ENST00000540159 RNF5Q99942 180 aa10.61□□□□□ -0.71
BNIP3-202ENST00000540159 THYN1Q9P016 225 aa10.61□□□□□ -0.71
BNIP3-202ENST00000540159 FOSL1P15407 271 aa10.6□□□□□ -0.71
BNIP3-202ENST00000540159 RPL7P18124 248 aaKnown RBP10.6□□□□□ -0.71
BNIP3-202ENST00000540159 CACNG7P62955 275 aa10.6□□□□□ -0.71
BNIP3-202ENST00000540159 KLRB1Q12918 225 aa10.6□□□□□ -0.71
BNIP3-202ENST00000540159 MRPL51Q4U2R6 128 aaKnown RBP10.6□□□□□ -0.71
BNIP3-202ENST00000540159 PRSS57Q6UWY2 283 aa10.6□□□□□ -0.71
BNIP3-202ENST00000540159 LCNL1Q6ZST4 164 aa10.6□□□□□ -0.71
BNIP3-202ENST00000540159 IGHG4P01861 327 aa10.6□□□□□ -0.71
BNIP3-202ENST00000540159 TM4SF20Q53R12 229 aa10.6□□□□□ -0.71
BNIP3-202ENST00000540159 C11orf71Q6IPW1 123 aa10.6□□□□□ -0.71
BNIP3-202ENST00000540159 MYO9AB2RTY4 2548 aa10.6□□□□□ -0.71
BNIP3-202ENST00000540159 FER1L6-AS1Q8NA97 138 aa10.59□□□□□ -0.71
BNIP3-202ENST00000540159 ZNF747Q9BV97 191 aa10.59□□□□□ -0.71
BNIP3-202ENST00000540159 A0A096LNJ9 63 aa10.59□□□□□ -0.71
BNIP3-202ENST00000540159 PIP4P2Q8N4L2 257 aa10.59□□□□□ -0.71
BNIP3-202ENST00000540159 SPOCK3Q9BQ16 436 aa10.59□□□□□ -0.71
BNIP3-202ENST00000540159 HSPB8Q9UJY1 196 aa10.59□□□□□ -0.71
BNIP3-202ENST00000540159 TRAV26-2A0A0B4J265 109 aa10.59□□□□□ -0.71
BNIP3-202ENST00000540159 M0R1W7 72 aa10.59□□□□□ -0.71
BNIP3-202ENST00000540159 LY6EQ16553 131 aa10.59□□□□□ -0.71
BNIP3-202ENST00000540159 CCDC144NLQ6NUI1 221 aa10.59□□□□□ -0.71
BNIP3-202ENST00000540159 OR10AG1Q8NH19 301 aa10.59□□□□□ -0.71
BNIP3-202ENST00000540159 TTTY13Q9BZ97 58 aa10.59□□□□□ -0.71
BNIP3-202ENST00000540159 TRAV30A0A087WSZ9 112 aa10.58□□□□□ -0.72
BNIP3-202ENST00000540159 C19orf84I3L1E1 186 aa10.58□□□□□ -0.72
BNIP3-202ENST00000540159 ANKRD39Q53RE8 183 aa10.58□□□□□ -0.72
BNIP3-202ENST00000540159 TTC9CQ8N5M4 171 aa10.58□□□□□ -0.72
BNIP3-202ENST00000540159 MRPS16Q9Y3D3 137 aaKnown RBP10.58□□□□□ -0.72
BNIP3-202ENST00000540159 COX11Q9Y6N1 276 aa10.58□□□□□ -0.72
BNIP3-202ENST00000540159 FAM231BA6NCW3 169 aa10.58□□□□□ -0.72
BNIP3-202ENST00000540159 FAM104BQ5XKR9 115 aa10.57□□□□□ -0.72
BNIP3-202ENST00000540159 ORMDL3Q8N138 153 aa10.57□□□□□ -0.72
BNIP3-202ENST00000540159 ZNF738Q8NE65 137 aa10.57□□□□□ -0.72
BNIP3-202ENST00000540159 IGHV3-11P01762 117 aa10.57□□□□□ -0.72
BNIP3-202ENST00000540159 NMUP48645 174 aa10.57□□□□□ -0.72
BNIP3-202ENST00000540159 PAX2Q02962 417 aa10.57□□□□□ -0.72
BNIP3-202ENST00000540159 FBXL19-AS1Q494R0 122 aa10.57□□□□□ -0.72
BNIP3-202ENST00000540159 C16orf54Q6UWD8 224 aa10.57□□□□□ -0.72
BNIP3-202ENST00000540159 UFC1Q9Y3C8 167 aa10.57□□□□□ -0.72
BNIP3-202ENST00000540159 CRXO43186 299 aaPredicted RBP10.56□□□□□ -0.72
BNIP3-202ENST00000540159 LYPD1Q8N2G4 141 aa10.56□□□□□ -0.72
BNIP3-202ENST00000540159 IGF1P05019 195 aa10.56□□□□□ -0.72
BNIP3-202ENST00000540159 RPL11P62913 178 aaKnown RBP10.56□□□□□ -0.72
BNIP3-202ENST00000540159 PSG9Q00887 426 aa10.56□□□□□ -0.72
BNIP3-202ENST00000540159 RNASE8Q8TDE3 154 aaKnown RBP10.56□□□□□ -0.72
BNIP3-202ENST00000540159 COL25A1Q9BXS0 654 aaPredicted RBP10.56□□□□□ -0.72
BNIP3-202ENST00000540159 PTPN13Q12923 2485 aa10.56□□□□□ -0.72
BNIP3-202ENST00000540159 SONP18583 2426 aaKnown RBP10.56□□□□□ -0.72
BNIP3-202ENST00000540159 IGSF10Q6WRI0 2623 aa10.56□□□□□ -0.72
BNIP3-202ENST00000540159 WFDC12Q8WWY7 111 aa10.56□□□□□ -0.72
BNIP3-202ENST00000540159 CCDC140Q96MF4 163 aa10.56□□□□□ -0.72
BNIP3-202ENST00000540159 ST20Q9HBF5 79 aa10.56□□□□□ -0.72
BNIP3-202ENST00000540159 SCRT2Q9NQ03 307 aa10.56□□□□□ -0.72
BNIP3-202ENST00000540159 DKK2Q9UBU2 259 aa10.56□□□□□ -0.72
BNIP3-202ENST00000540159 GAGE1Q13065 139 aa10.55□□□□□ -0.72
BNIP3-202ENST00000540159 RNF151Q2KHN1 245 aa10.55□□□□□ -0.72
BNIP3-202ENST00000540159 BVES-AS1Q5T3Y7 98 aa10.55□□□□□ -0.72
BNIP3-202ENST00000540159 SRSF8Q9BRL6 282 aaKnown RBP10.55□□□□□ -0.72
BNIP3-202ENST00000540159 SIRPDQ9H106 197 aa10.55□□□□□ -0.72
BNIP3-202ENST00000540159 K7EMI3 77 aa10.55□□□□□ -0.72
BNIP3-202ENST00000540159 TRBV12-3P01733 135 aa10.55□□□□□ -0.72
BNIP3-202ENST00000540159 TRGV3P03979 118 aa10.55□□□□□ -0.72
BNIP3-202ENST00000540159 PET117Q6UWS5 81 aa10.55□□□□□ -0.72
BNIP3-202ENST00000540159 MRPL52Q86TS9 123 aaKnown RBP10.55□□□□□ -0.72
BNIP3-202ENST00000540159 Q8N6K4 173 aa10.55□□□□□ -0.72
BNIP3-202ENST00000540159 OR4C5Q8NGB2 326 aa10.55□□□□□ -0.72
BNIP3-202ENST00000540159 GLMPQ8WWB7 406 aa10.55□□□□□ -0.72
BNIP3-202ENST00000540159 C11orf21Q9P2W6 132 aa10.55□□□□□ -0.72
BNIP3-202ENST00000540159 SRD5A1P18405 259 aa10.54□□□□□ -0.72
BNIP3-202ENST00000540159 PDE6HQ13956 83 aa10.54□□□□□ -0.72
BNIP3-202ENST00000540159 LINC01545Q5VT33 79 aa10.54□□□□□ -0.72
BNIP3-202ENST00000540159 ZNF575Q86XF7 245 aa10.54□□□□□ -0.72
BNIP3-202ENST00000540159 RAB37Q96AX2 223 aa10.54□□□□□ -0.72
BNIP3-202ENST00000540159 TRAV40A0A0B4J280 105 aa10.53□□□□□ -0.72
BNIP3-202ENST00000540159 BUB3O43684 328 aa10.53□□□□□ -0.72
BNIP3-202ENST00000540159 SAPCD1Q5SSQ6 148 aa10.53□□□□□ -0.72
BNIP3-202ENST00000540159 AMMECR1LQ6DCA0 310 aa10.53□□□□□ -0.72
BNIP3-202ENST00000540159 PCP2Q8IVA1 136 aa10.53□□□□□ -0.72
BNIP3-202ENST00000540159 ZNF502Q8TBZ5 544 aa10.53□□□□□ -0.72
BNIP3-202ENST00000540159 AGPAT4-IT1Q9H0P7 198 aa10.53□□□□□ -0.72
BNIP3-202ENST00000540159 IGHV2-70DA0A0C4DH43 119 aa10.52□□□□□ -0.72
BNIP3-202ENST00000540159 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.52□□□□□ -0.72
BNIP3-202ENST00000540159 AJUBAQ96IF1 538 aa10.52□□□□□ -0.72
BNIP3-202ENST00000540159 KLK15Q9H2R5 256 aa10.52□□□□□ -0.72
BNIP3-202ENST00000540159 TAX1BP3O14907 124 aa10.52□□□□□ -0.73
BNIP3-202ENST00000540159 GNLYP22749 145 aa10.52□□□□□ -0.73
BNIP3-202ENST00000540159 ZFAND3Q9H8U3 227 aa10.52□□□□□ -0.73
BNIP3-202ENST00000540159 CLPSL1A2RUU4 121 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 219 ms