RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 CNTFRP26992 372 aa4.88□□□□□ -1.63
PTPRD-214ENST00000540109 OR13A1Q8NGR1 328 aa4.88□□□□□ -1.63
PTPRD-214ENST00000540109 LINC00479Q96M42 142 aa4.88□□□□□ -1.63
PTPRD-214ENST00000540109 CALYQ9NYX4 217 aa4.88□□□□□ -1.63
PTPRD-214ENST00000540109 SDK1Q7Z5N4 2213 aa4.88□□□□□ -1.63
PTPRD-214ENST00000540109 DAZAP2Q15038 168 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-214ENST00000540109 MPLKIPQ8TAP9 179 aa4.88□□□□□ -1.63
PTPRD-214ENST00000540109 Q8TCH9 128 aa4.88□□□□□ -1.63
PTPRD-214ENST00000540109 PRADC1Q9BSG0 188 aa4.88□□□□□ -1.63
PTPRD-214ENST00000540109 Q9H3A6 140 aa4.88□□□□□ -1.63
PTPRD-214ENST00000540109 PPDPFQ9H3Y8 114 aa4.88□□□□□ -1.63
PTPRD-214ENST00000540109 SRRM5B3KS81 715 aa4.88□□□□□ -1.63
PTPRD-214ENST00000540109 TCRAP04437 139 aa4.88□□□□□ -1.63
PTPRD-214ENST00000540109 PDE6GP18545 87 aa4.88□□□□□ -1.63
PTPRD-214ENST00000540109 SYNJ2BPP57105 145 aa4.88□□□□□ -1.63
PTPRD-214ENST00000540109 SPACA3Q8IXA5 215 aa4.88□□□□□ -1.63
PTPRD-214ENST00000540109 LEAP2Q969E1 77 aa4.88□□□□□ -1.63
PTPRD-214ENST00000540109 V9GYV3 84 aa4.88□□□□□ -1.63
PTPRD-214ENST00000540109 ARHGAP21Q5T5U3 1957 aa4.88□□□□□ -1.63
PTPRD-214ENST00000540109 IGHV1-18A0A0C4DH31 117 aa4.88□□□□□ -1.63
PTPRD-214ENST00000540109 NPFFO15130 113 aa4.88□□□□□ -1.63
PTPRD-214ENST00000540109 PRR30Q53SZ7 412 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-214ENST00000540109 IGFBPL1Q8WX77 278 aa4.88□□□□□ -1.63
PTPRD-214ENST00000540109 EEF1AKMT3Q96AZ1 226 aa4.88□□□□□ -1.63
PTPRD-214ENST00000540109 UBL5Q9BZL1 73 aa4.88□□□□□ -1.63
PTPRD-214ENST00000540109 TMEM14CQ9P0S9 112 aa4.88□□□□□ -1.63
PTPRD-214ENST00000540109 IGLV3-9A0A075B6K5 115 aa4.87□□□□□ -1.63
PTPRD-214ENST00000540109 NDUFC2-KCTD14E9PQ53 114 aa4.87□□□□□ -1.63
PTPRD-214ENST00000540109 VCYO14598 125 aa4.87□□□□□ -1.63
PTPRD-214ENST00000540109 LINC00694P0DN24 101 aa4.87□□□□□ -1.63
PTPRD-214ENST00000540109 CR1LQ2VPA4 569 aa4.87□□□□□ -1.63
PTPRD-214ENST00000540109 IL17RELQ6ZVW7 336 aa4.87□□□□□ -1.63
PTPRD-214ENST00000540109 IGKV3D-20A0A0C4DH25 116 aa4.87□□□□□ -1.63
PTPRD-214ENST00000540109 M0R381 172 aa4.87□□□□□ -1.63
PTPRD-214ENST00000540109 OVOL1O14753 267 aa4.87□□□□□ -1.63
PTPRD-214ENST00000540109 CRYGCP07315 174 aa4.87□□□□□ -1.63
PTPRD-214ENST00000540109 DUTP33316 252 aaKnown RBP4.87□□□□□ -1.63
PTPRD-214ENST00000540109 FXYD2P54710 66 aa4.87□□□□□ -1.63
PTPRD-214ENST00000540109 TMEM86BQ8N661 226 aa4.87□□□□□ -1.63
PTPRD-214ENST00000540109 TMEM75Q8N9X5 138 aa4.87□□□□□ -1.63
PTPRD-214ENST00000540109 IGHV3OR15-7A0A075B7D8 119 aa4.87□□□□□ -1.63
PTPRD-214ENST00000540109 IGKV1-6A0A0C4DH72 117 aa4.87□□□□□ -1.63
PTPRD-214ENST00000540109 FAM74A4Q5TZK3 123 aa4.87□□□□□ -1.63
PTPRD-214ENST00000540109 PRSS33Q8NF86 280 aa4.87□□□□□ -1.63
PTPRD-214ENST00000540109 TMEM158Q8WZ71 300 aa4.87□□□□□ -1.63
PTPRD-214ENST00000540109 TRAV12-1A0A0B4J245 112 aa4.87□□□□□ -1.63
PTPRD-214ENST00000540109 F8VRH5 84 aa4.87□□□□□ -1.63
PTPRD-214ENST00000540109 FGF6P10767 208 aa4.87□□□□□ -1.63
PTPRD-214ENST00000540109 FAM104BQ5XKR9 115 aa4.87□□□□□ -1.63
PTPRD-214ENST00000540109 RASL10AQ92737 203 aa4.87□□□□□ -1.63
PTPRD-214ENST00000540109 DKK4Q9UBT3 224 aa4.87□□□□□ -1.63
PTPRD-214ENST00000540109 DYSFO75923 2080 aa4.87□□□□□ -1.63
PTPRD-214ENST00000540109 WDR86Q86TI4 376 aa4.87□□□□□ -1.63
PTPRD-214ENST00000540109 DKK2Q9UBU2 259 aa4.87□□□□□ -1.63
PTPRD-214ENST00000540109 OOSP1A8MZH6 123 aa4.86□□□□□ -1.63
PTPRD-214ENST00000540109 ZNF747Q9BV97 191 aa4.86□□□□□ -1.63
PTPRD-214ENST00000540109 LOC107984640A0A0U1RRK4 108 aa4.86□□□□□ -1.63
PTPRD-214ENST00000540109 hADV29S1A0JD25 119 aa4.86□□□□□ -1.63
PTPRD-214ENST00000540109 RPL39P5Q59GN2 51 aa4.86□□□□□ -1.63
PTPRD-214ENST00000540109 RPUSD1Q9UJJ7 312 aaKnown RBP4.86□□□□□ -1.63
PTPRD-214ENST00000540109 A0A0G2JRQ6 117 aa4.86□□□□□ -1.63
PTPRD-214ENST00000540109 IGKV1D-33P01593 117 aa4.86□□□□□ -1.63
PTPRD-214ENST00000540109 IGKV1-33P01594 117 aa4.86□□□□□ -1.63
PTPRD-214ENST00000540109 TFF1P04155 84 aa4.86□□□□□ -1.63
PTPRD-214ENST00000540109 SAA1P0DJI8 122 aaPredicted RBP4.86□□□□□ -1.63
PTPRD-214ENST00000540109 TMEM243Q9BU79 118 aa4.86□□□□□ -1.63
PTPRD-214ENST00000540109 CSDC2Q9Y534 153 aaKnown RBP4.86□□□□□ -1.63
PTPRD-214ENST00000540109 TRAV41A0A0B4J266 112 aa4.86□□□□□ -1.63
PTPRD-214ENST00000540109 A0A0B4J2C4 111 aa4.86□□□□□ -1.63
PTPRD-214ENST00000540109 FAM240AA0A1B0GVK7 77 aa4.86□□□□□ -1.63
PTPRD-214ENST00000540109 SPTSSBQ8NFR3 76 aa4.86□□□□□ -1.63
PTPRD-214ENST00000540109 C10orf105Q8TEF2 133 aa4.86□□□□□ -1.63
PTPRD-214ENST00000540109 LENEPQ9Y5L5 61 aa4.86□□□□□ -1.63
PTPRD-214ENST00000540109 C12orf77C9JDV5 145 aa4.86□□□□□ -1.63
PTPRD-214ENST00000540109 RPL35AP18077 110 aaKnown RBP4.86□□□□□ -1.63
PTPRD-214ENST00000540109 CXCL5P42830 114 aa4.86□□□□□ -1.63
PTPRD-214ENST00000540109 RBMY1FQ15415 496 aaKnown RBP4.86□□□□□ -1.63
PTPRD-214ENST00000540109 NEU4Q8WWR8 484 aaPredicted RBP4.86□□□□□ -1.63
PTPRD-214ENST00000540109 MED12Q93074 2177 aa4.86□□□□□ -1.63
PTPRD-214ENST00000540109 M0R1B8 84 aa4.85□□□□□ -1.63
PTPRD-214ENST00000540109 Q6ZPA2 131 aa4.85□□□□□ -1.63
PTPRD-214ENST00000540109 VPREB3Q9UKI3 123 aa4.85□□□□□ -1.63
PTPRD-214ENST00000540109 H0YGX0 51 aa4.85□□□□□ -1.63
PTPRD-214ENST00000540109 C16orf97H3BN30 126 aa4.85□□□□□ -1.63
PTPRD-214ENST00000540109 LYZL1Q6UWQ5 148 aa4.85□□□□□ -1.63
PTPRD-214ENST00000540109 DTX2Q86UW9 622 aa4.85□□□□□ -1.63
PTPRD-214ENST00000540109 C11orf53Q8IXP5 236 aa4.85□□□□□ -1.63
PTPRD-214ENST00000540109 TTTY13Q9BZ97 58 aa4.85□□□□□ -1.63
PTPRD-214ENST00000540109 DPH3P1Q9H4G8 78 aa4.85□□□□□ -1.63
PTPRD-214ENST00000540109 EDN2P20800 178 aa4.85□□□□□ -1.63
PTPRD-214ENST00000540109 ZNF581Q9P0T4 197 aa4.85□□□□□ -1.63
PTPRD-214ENST00000540109 DUSP14O95147 198 aaKnown RBP4.85□□□□□ -1.63
PTPRD-214ENST00000540109 FRMD6-AS1P0C7T7 363 aa4.85□□□□□ -1.63
PTPRD-214ENST00000540109 SUMO2P61956 95 aaKnown RBP4.85□□□□□ -1.63
PTPRD-214ENST00000540109 HERVK_113P63121 156 aa4.85□□□□□ -1.63
PTPRD-214ENST00000540109 TMEM167AQ8TBQ9 72 aa4.85□□□□□ -1.63
PTPRD-214ENST00000540109 IGHV3-72A0A0B4J1Y9 119 aa4.85□□□□□ -1.63
PTPRD-214ENST00000540109 A0A1B0GX51 115 aa4.85□□□□□ -1.63
PTPRD-214ENST00000540109 VWC2LB2RUY7 222 aa4.85□□□□□ -1.63
PTPRD-214ENST00000540109 PF4P02776 101 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms