RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 C7orf66A4D0T2 115 aa13.51□□□□□ -0.25
LPCAT3-210ENST00000540090 H3BMQ9 156 aa13.51□□□□□ -0.25
LPCAT3-210ENST00000540090 M0R3E3 92 aa13.51□□□□□ -0.25
LPCAT3-210ENST00000540090 PRAF2O60831 178 aa13.51□□□□□ -0.25
LPCAT3-210ENST00000540090 MPDU1O75352 247 aa13.51□□□□□ -0.25
LPCAT3-210ENST00000540090 SCGB1D2O95969 90 aa13.51□□□□□ -0.25
LPCAT3-210ENST00000540090 RNASE4P34096 147 aaKnown RBP13.51□□□□□ -0.25
LPCAT3-210ENST00000540090 CAMLGP49069 296 aa13.51□□□□□ -0.25
LPCAT3-210ENST00000540090 FHL2Q14192 279 aa13.51□□□□□ -0.25
LPCAT3-210ENST00000540090 IAH1Q2TAA2 248 aaPredicted RBP13.51□□□□□ -0.25
LPCAT3-210ENST00000540090 NEGR1Q7Z3B1 354 aa13.51□□□□□ -0.25
LPCAT3-210ENST00000540090 AGPAT4-IT1Q9H0P7 198 aa13.51□□□□□ -0.25
LPCAT3-210ENST00000540090 MSRB1Q9NZV6 116 aa13.51□□□□□ -0.25
LPCAT3-210ENST00000540090 NDUFB6O95139 128 aa13.5□□□□□ -0.25
LPCAT3-210ENST00000540090 VGLL1Q99990 258 aa13.5□□□□□ -0.25
LPCAT3-210ENST00000540090 FLVCR2Q9UPI3 526 aa13.5□□□□□ -0.25
LPCAT3-210ENST00000540090 TRBV19A0A075B6N1 114 aa13.49□□□□□ -0.25
LPCAT3-210ENST00000540090 CRISP2P16562 243 aa13.49□□□□□ -0.25
LPCAT3-210ENST00000540090 RAB31Q13636 194 aa13.49□□□□□ -0.25
LPCAT3-210ENST00000540090 MIC13Q5XKP0 118 aa13.49□□□□□ -0.25
LPCAT3-210ENST00000540090 NRARPQ7Z6K4 114 aa13.49□□□□□ -0.25
LPCAT3-210ENST00000540090 OR1L4Q8NGR5 311 aa13.49□□□□□ -0.25
LPCAT3-210ENST00000540090 C8orf49Q96NF6 230 aa13.49□□□□□ -0.25
LPCAT3-210ENST00000540090 MRPL32Q9BYC8 188 aaKnown RBP13.49□□□□□ -0.25
LPCAT3-210ENST00000540090 GSKIPQ9P0R6 139 aa13.49□□□□□ -0.25
LPCAT3-210ENST00000540090 TP53TG3Q9ULZ0 132 aa13.49□□□□□ -0.25
LPCAT3-210ENST00000540090 PRELID1Q9Y255 219 aa13.49□□□□□ -0.25
LPCAT3-210ENST00000540090 MBPP02686 304 aaPredicted RBP13.48□□□□□ -0.25
LPCAT3-210ENST00000540090 GPX1P07203 203 aa13.48□□□□□ -0.25
LPCAT3-210ENST00000540090 NMBP08949 121 aa13.48□□□□□ -0.25
LPCAT3-210ENST00000540090 C9orf47Q6ZRZ4 202 aa13.48□□□□□ -0.25
LPCAT3-210ENST00000540090 MRPL16Q9NX20 251 aaKnown RBP13.48□□□□□ -0.25
LPCAT3-210ENST00000540090 NOL3O60936 208 aaKnown RBP13.47□□□□□ -0.25
LPCAT3-210ENST00000540090 NDUFB4O95168 129 aa13.47□□□□□ -0.25
LPCAT3-210ENST00000540090 EVI2AP22794 236 aa13.47□□□□□ -0.25
LPCAT3-210ENST00000540090 Q6ZSN1 163 aa13.47□□□□□ -0.25
LPCAT3-210ENST00000540090 C12orf45Q8N5I9 185 aaPredicted RBP13.47□□□□□ -0.25
LPCAT3-210ENST00000540090 PFDN5Q99471 154 aa13.47□□□□□ -0.25
LPCAT3-210ENST00000540090 IGHV1OR15-1A0A075B7D0 117 aa13.46□□□□□ -0.25
LPCAT3-210ENST00000540090 RGS13O14921 159 aa13.46□□□□□ -0.25
LPCAT3-210ENST00000540090 HIST1H1EP10412 219 aaKnown RBP13.46□□□□□ -0.25
LPCAT3-210ENST00000540090 WFDC10BQ8IUB3 73 aa13.46□□□□□ -0.25
LPCAT3-210ENST00000540090 ZFAND2AQ8N6M9 145 aa13.46□□□□□ -0.25
LPCAT3-210ENST00000540090 TMEM14CQ9P0S9 112 aa13.46□□□□□ -0.25
LPCAT3-210ENST00000540090 NAP1L6A6NFF2 107 aa13.45□□□□□ -0.26
LPCAT3-210ENST00000540090 K7EQD1 137 aa13.45□□□□□ -0.26
LPCAT3-210ENST00000540090 RPL29P47914 159 aaKnown RBP13.45□□□□□ -0.26
LPCAT3-210ENST00000540090 HAMPP81172 84 aa13.45□□□□□ -0.26
LPCAT3-210ENST00000540090 PDE6HQ13956 83 aa13.45□□□□□ -0.26
LPCAT3-210ENST00000540090 Q6ZQT7 251 aa13.45□□□□□ -0.26
LPCAT3-210ENST00000540090 IQCF2Q8IXL9 164 aa13.45□□□□□ -0.26
LPCAT3-210ENST00000540090 TMEM70Q9BUB7 260 aa13.45□□□□□ -0.26
LPCAT3-210ENST00000540090 WDR83OSQ9Y284 106 aa13.45□□□□□ -0.26
LPCAT3-210ENST00000540090 E5RGE8 158 aa13.44□□□□□ -0.26
LPCAT3-210ENST00000540090 SRIP30626 198 aa13.44□□□□□ -0.26
LPCAT3-210ENST00000540090 S100A5P33763 92 aa13.44□□□□□ -0.26
LPCAT3-210ENST00000540090 PRR9Q5T870 116 aa13.44□□□□□ -0.26
LPCAT3-210ENST00000540090 EXOC3-AS1Q8N2X6 119 aa13.44□□□□□ -0.26
LPCAT3-210ENST00000540090 MITD1Q8WV92 249 aa13.44□□□□□ -0.26
LPCAT3-210ENST00000540090 ARPC5LQ9BPX5 153 aa13.44□□□□□ -0.26
LPCAT3-210ENST00000540090 SLC39A9Q9NUM3 307 aa13.44□□□□□ -0.26
LPCAT3-210ENST00000540090 TIMM9Q9Y5J7 89 aa13.44□□□□□ -0.26
LPCAT3-210ENST00000540090 TRGV4A0A0C4DH28 118 aa13.43□□□□□ -0.26
LPCAT3-210ENST00000540090 J3QL48 77 aa13.43□□□□□ -0.26
LPCAT3-210ENST00000540090 L7N2F9 121 aa13.43□□□□□ -0.26
LPCAT3-210ENST00000540090 VAMP2P63027 116 aa13.43□□□□□ -0.26
LPCAT3-210ENST00000540090 C20orf85Q9H1P6 137 aa13.43□□□□□ -0.26
LPCAT3-210ENST00000540090 UQCC1Q9NVA1 299 aa13.43□□□□□ -0.26
LPCAT3-210ENST00000540090 IGLV5-52A0A0A0MRZ9 124 aa13.42□□□□□ -0.26
LPCAT3-210ENST00000540090 CST7O76096 145 aa13.42□□□□□ -0.26
LPCAT3-210ENST00000540090 CRYGDP07320 174 aa13.42□□□□□ -0.26
LPCAT3-210ENST00000540090 VWC2Q2TAL6 325 aa13.42□□□□□ -0.26
LPCAT3-210ENST00000540090 TMEM78Q5T7P6 136 aa13.42□□□□□ -0.26
LPCAT3-210ENST00000540090 C10orf126Q8N4M7 172 aa13.42□□□□□ -0.26
LPCAT3-210ENST00000540090 CHAC2Q8WUX2 184 aa13.42□□□□□ -0.26
LPCAT3-210ENST00000540090 SRRQ9GZT4 340 aa13.42□□□□□ -0.26
LPCAT3-210ENST00000540090 ZNF492Q9P255 531 aa13.42□□□□□ -0.26
LPCAT3-210ENST00000540090 LRCOL1A6NCL2 159 aa13.41□□□□□ -0.26
LPCAT3-210ENST00000540090 PYYP10082 97 aa13.41□□□□□ -0.26
LPCAT3-210ENST00000540090 GYPEP15421 78 aa13.41□□□□□ -0.26
LPCAT3-210ENST00000540090 BCAP31P51572 246 aa13.41□□□□□ -0.26
LPCAT3-210ENST00000540090 ZNF415Q09FC8 603 aa13.41□□□□□ -0.26
LPCAT3-210ENST00000540090 BAK1Q16611 211 aa13.41□□□□□ -0.26
LPCAT3-210ENST00000540090 NTN5Q8WTR8 489 aaPredicted RBP13.41□□□□□ -0.26
LPCAT3-210ENST00000540090 BLNKQ8WV28 456 aa13.41□□□□□ -0.26
LPCAT3-210ENST00000540090 ZNF479Q96JC4 524 aa13.41□□□□□ -0.26
LPCAT3-210ENST00000540090 C11orf1Q9H5F2 150 aa13.41□□□□□ -0.26
LPCAT3-210ENST00000540090 AAMDCQ9H7C9 122 aa13.41□□□□□ -0.26
LPCAT3-210ENST00000540090 IGKV2-40A0A087WW87 121 aaPredicted RBP13.4□□□□□ -0.26
LPCAT3-210ENST00000540090 FAM24AA6NFZ4 105 aa13.4□□□□□ -0.26
LPCAT3-210ENST00000540090 IGKV2D-40P01614 121 aaPredicted RBP13.4□□□□□ -0.26
LPCAT3-210ENST00000540090 ORM1P02763 201 aa13.4□□□□□ -0.26
LPCAT3-210ENST00000540090 SFTA3P0C7M3 94 aa13.4□□□□□ -0.26
LPCAT3-210ENST00000540090 CAV2P51636 162 aa13.4□□□□□ -0.26
LPCAT3-210ENST00000540090 OR10G4Q8NGN3 311 aa13.4□□□□□ -0.26
LPCAT3-210ENST00000540090 PCNPQ8WW12 178 aaKnown RBP13.4□□□□□ -0.26
LPCAT3-210ENST00000540090 RASL10AQ92737 203 aa13.4□□□□□ -0.26
LPCAT3-210ENST00000540090 TRBV7-9A0A0J9YWB2 115 aa13.39□□□□□ -0.27
LPCAT3-210ENST00000540090 INPP1P49441 399 aa13.39□□□□□ -0.27
LPCAT3-210ENST00000540090 LSM5Q9Y4Y9 91 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms