RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 SIVA1O15304 175 aa10.85□□□□□ -0.67
SCNN1A-215ENST00000540037 IGHG4P01861 327 aa10.85□□□□□ -0.67
SCNN1A-215ENST00000540037 PRSS1P07477 247 aa10.85□□□□□ -0.67
SCNN1A-215ENST00000540037 FABP2P12104 132 aa10.85□□□□□ -0.67
SCNN1A-215ENST00000540037 ERCC8Q13216 396 aa10.85□□□□□ -0.67
SCNN1A-215ENST00000540037 PPIAL4CA0A0B4J2A2 164 aa10.84□□□□□ -0.67
SCNN1A-215ENST00000540037 PPIAL4GP0DN37 164 aa10.84□□□□□ -0.67
SCNN1A-215ENST00000540037 ONECUT1Q9UBC0 465 aa10.84□□□□□ -0.67
SCNN1A-215ENST00000540037 AGRNO00468 2067 aa10.84□□□□□ -0.67
SCNN1A-215ENST00000540037 SMIM13P0DJ93 91 aa10.84□□□□□ -0.67
SCNN1A-215ENST00000540037 FANCD2OSQ96PS1 177 aa10.84□□□□□ -0.67
SCNN1A-215ENST00000540037 CHAC1Q9BUX1 264 aa10.84□□□□□ -0.67
SCNN1A-215ENST00000540037 COL25A1Q9BXS0 654 aaPredicted RBP10.84□□□□□ -0.67
SCNN1A-215ENST00000540037 NHP2Q9NX24 153 aaKnown RBP10.84□□□□□ -0.67
SCNN1A-215ENST00000540037 SMAD5-AS1Q9Y6J3 95 aa10.84□□□□□ -0.67
SCNN1A-215ENST00000540037 SHISA9B4DS77 424 aa10.84□□□□□ -0.67
SCNN1A-215ENST00000540037 LY6HO94772 140 aa10.84□□□□□ -0.67
SCNN1A-215ENST00000540037 FOXC2Q99958 501 aa10.84□□□□□ -0.67
SCNN1A-215ENST00000540037 IGLC6P0CF74 106 aa10.83□□□□□ -0.68
SCNN1A-215ENST00000540037 KLRD1Q13241 179 aa10.83□□□□□ -0.68
SCNN1A-215ENST00000540037 MTURNQ8N3F0 131 aa10.83□□□□□ -0.68
SCNN1A-215ENST00000540037 TRBV25-1A0A075B6N4 114 aa10.83□□□□□ -0.68
SCNN1A-215ENST00000540037 PRAC2D3DTV9 90 aa10.83□□□□□ -0.68
SCNN1A-215ENST00000540037 HES1Q14469 280 aa10.83□□□□□ -0.68
SCNN1A-215ENST00000540037 LY6LH3BQJ8 138 aa10.82□□□□□ -0.68
SCNN1A-215ENST00000540037 TNFRSF6BO95407 300 aa10.82□□□□□ -0.68
SCNN1A-215ENST00000540037 NDPQ00604 133 aa10.82□□□□□ -0.68
SCNN1A-215ENST00000540037 OR5A1Q8NGJ0 315 aa10.82□□□□□ -0.68
SCNN1A-215ENST00000540037 TMEM158Q8WZ71 300 aa10.82□□□□□ -0.68
SCNN1A-215ENST00000540037 TNFRSF14Q92956 283 aa10.82□□□□□ -0.68
SCNN1A-215ENST00000540037 TMEM11P17152 192 aa10.82□□□□□ -0.68
SCNN1A-215ENST00000540037 ZC2HC1BQ5TFG8 222 aa10.82□□□□□ -0.68
SCNN1A-215ENST00000540037 RIF1Q5UIP0 2472 aaKnown RBP10.82□□□□□ -0.68
SCNN1A-215ENST00000540037 IGFL3Q6UXB1 125 aa10.82□□□□□ -0.68
SCNN1A-215ENST00000540037 Q6ZQT7 251 aa10.82□□□□□ -0.68
SCNN1A-215ENST00000540037 PIP4P1Q86T03 277 aa10.82□□□□□ -0.68
SCNN1A-215ENST00000540037 RNF182Q8N6D2 247 aa10.82□□□□□ -0.68
SCNN1A-215ENST00000540037 MAP1LC3AQ9H492 121 aa10.82□□□□□ -0.68
SCNN1A-215ENST00000540037 TRAV26-2A0A0B4J265 109 aa10.82□□□□□ -0.68
SCNN1A-215ENST00000540037 MAPKAPK5-AS1Q8N8E1 139 aa10.82□□□□□ -0.68
SCNN1A-215ENST00000540037 PHLDA1Q8WV24 401 aaPredicted RBP10.82□□□□□ -0.68
SCNN1A-215ENST00000540037 GTSF1LQ9H1H1 148 aa10.82□□□□□ -0.68
SCNN1A-215ENST00000540037 TMEM160Q9NX00 188 aa10.82□□□□□ -0.68
SCNN1A-215ENST00000540037 TRAV40A0A0B4J280 105 aa10.81□□□□□ -0.68
SCNN1A-215ENST00000540037 TMEM8BA6NDV4 472 aa10.81□□□□□ -0.68
SCNN1A-215ENST00000540037 NBR2O15453 112 aa10.81□□□□□ -0.68
SCNN1A-215ENST00000540037 PDE6HQ13956 83 aa10.81□□□□□ -0.68
SCNN1A-215ENST00000540037 DYNAPQ8N1N2 210 aa10.81□□□□□ -0.68
SCNN1A-215ENST00000540037 PSMG3-AS1Q96PY0 264 aa10.81□□□□□ -0.68
SCNN1A-215ENST00000540037 IGHV3-66A0A0C4DH42 116 aa10.81□□□□□ -0.68
SCNN1A-215ENST00000540037 TRGV3P03979 118 aa10.81□□□□□ -0.68
SCNN1A-215ENST00000540037 CLEC2AQ6UVW9 174 aa10.81□□□□□ -0.68
SCNN1A-215ENST00000540037 IGHV3OR16-13A0A075B7E8 117 aa10.8□□□□□ -0.68
SCNN1A-215ENST00000540037 IGHV3-74A0A0B4J1X5 117 aa10.8□□□□□ -0.68
SCNN1A-215ENST00000540037 IGKCP01834 107 aa10.8□□□□□ -0.68
SCNN1A-215ENST00000540037 FCER1GP30273 86 aa10.8□□□□□ -0.68
SCNN1A-215ENST00000540037 WFDC2Q14508 124 aa10.8□□□□□ -0.68
SCNN1A-215ENST00000540037 ZMAT4Q9H898 229 aa10.8□□□□□ -0.68
SCNN1A-215ENST00000540037 TMEM95Q3KNT9 176 aa10.8□□□□□ -0.68
SCNN1A-215ENST00000540037 IGLV11-55A0A075B6I3 123 aa10.79□□□□□ -0.68
SCNN1A-215ENST00000540037 MFAP4P55083 255 aa10.79□□□□□ -0.68
SCNN1A-215ENST00000540037 AMTNQ6UX39 209 aa10.79□□□□□ -0.68
SCNN1A-215ENST00000540037 DTX2Q86UW9 622 aa10.79□□□□□ -0.68
SCNN1A-215ENST00000540037 LCNL1Q6ZST4 164 aa10.79□□□□□ -0.68
SCNN1A-215ENST00000540037 IL17RELQ6ZVW7 336 aa10.79□□□□□ -0.68
SCNN1A-215ENST00000540037 CFHR4Q92496 578 aa10.79□□□□□ -0.68
SCNN1A-215ENST00000540037 MRPL35Q9NZE8 188 aaKnown RBP10.79□□□□□ -0.68
SCNN1A-215ENST00000540037 C21orf62Q9NYP8 219 aa10.79□□□□□ -0.68
SCNN1A-215ENST00000540037 C11orf21Q9P2W6 132 aa10.79□□□□□ -0.68
SCNN1A-215ENST00000540037 NBASA2RRP1 2371 aa10.78□□□□□ -0.68
SCNN1A-215ENST00000540037 NCBP2LA6PVI3 153 aaKnown RBP10.78□□□□□ -0.68
SCNN1A-215ENST00000540037 PRRG2O14669 202 aa10.78□□□□□ -0.68
SCNN1A-215ENST00000540037 SMAGPQ0VAQ4 97 aa10.78□□□□□ -0.68
SCNN1A-215ENST00000540037 SH2D6Q7Z4S9 175 aa10.78□□□□□ -0.68
SCNN1A-215ENST00000540037 ZNF292O60281 2723 aa10.78□□□□□ -0.68
SCNN1A-215ENST00000540037 HRNRQ86YZ3 2850 aaPredicted RBP10.78□□□□□ -0.68
SCNN1A-215ENST00000540037 H3BMG7 143 aa10.78□□□□□ -0.68
SCNN1A-215ENST00000540037 BMI1P35226 326 aa10.78□□□□□ -0.68
SCNN1A-215ENST00000540037 CEND1Q8N111 149 aa10.78□□□□□ -0.68
SCNN1A-215ENST00000540037 RAB1BQ9H0U4 201 aa10.78□□□□□ -0.68
SCNN1A-215ENST00000540037 CELSR1Q9NYQ6 3014 aa10.77□□□□□ -0.68
SCNN1A-215ENST00000540037 SPRY2O43597 315 aa10.77□□□□□ -0.68
SCNN1A-215ENST00000540037 CTSGP08311 255 aa10.77□□□□□ -0.68
SCNN1A-215ENST00000540037 AZU1P20160 251 aa10.77□□□□□ -0.68
SCNN1A-215ENST00000540037 EFNA4P52798 201 aa10.77□□□□□ -0.68
SCNN1A-215ENST00000540037 SAMD13Q5VXD3 122 aa10.77□□□□□ -0.68
SCNN1A-215ENST00000540037 SMIM17P0DL12 118 aa10.77□□□□□ -0.69
SCNN1A-215ENST00000540037 RPL7P18124 248 aaKnown RBP10.77□□□□□ -0.69
SCNN1A-215ENST00000540037 COX8CQ7Z4L0 72 aa10.77□□□□□ -0.69
SCNN1A-215ENST00000540037 IGHV3-49A0A0A0MS15 119 aa10.76□□□□□ -0.69
SCNN1A-215ENST00000540037 IGKV3D-20A0A0C4DH25 116 aa10.76□□□□□ -0.69
SCNN1A-215ENST00000540037 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.76□□□□□ -0.69
SCNN1A-215ENST00000540037 C5orf64Q2M2E5 130 aa10.76□□□□□ -0.69
SCNN1A-215ENST00000540037 PRR30Q53SZ7 412 aaPredicted RBP10.76□□□□□ -0.69
SCNN1A-215ENST00000540037 ARPC1AQ92747 370 aa10.76□□□□□ -0.69
SCNN1A-215ENST00000540037 TSSC4Q9Y5U2 329 aaPredicted RBP10.76□□□□□ -0.69
SCNN1A-215ENST00000540037 FABP5P3A8MUU1 101 aa10.76□□□□□ -0.69
SCNN1A-215ENST00000540037 DPM2O94777 84 aa10.76□□□□□ -0.69
SCNN1A-215ENST00000540037 NDUFA3O95167 84 aa10.76□□□□□ -0.69
SCNN1A-215ENST00000540037 HIGD1BQ9P298 99 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms