RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 LINC00477Q96M19 166 aa13.05□□□□□ -0.32
SNRPA1-203ENST00000540017 TRAV10A0A0B4J240 114 aa13.04□□□□□ -0.32
SNRPA1-203ENST00000540017 C11orf94C9JXX5 98 aa13.04□□□□□ -0.32
SNRPA1-203ENST00000540017 ARL14EPLP0DKL9 152 aa13.04□□□□□ -0.32
SNRPA1-203ENST00000540017 HTN1P15515 57 aa13.04□□□□□ -0.32
SNRPA1-203ENST00000540017 TAS2R60P59551 318 aa13.04□□□□□ -0.32
SNRPA1-203ENST00000540017 SSX7Q7RTT5 188 aa13.04□□□□□ -0.32
SNRPA1-203ENST00000540017 C2CD4CQ8TF44 421 aa13.04□□□□□ -0.32
SNRPA1-203ENST00000540017 LINC00476Q8WZB0 136 aa13.04□□□□□ -0.32
SNRPA1-203ENST00000540017 TRAV12-3A0A0B4J271 114 aa13.03□□□□□ -0.32
SNRPA1-203ENST00000540017 STAG3L2P0CL84 134 aa13.03□□□□□ -0.32
SNRPA1-203ENST00000540017 STAG3L3P0CL85 134 aa13.03□□□□□ -0.32
SNRPA1-203ENST00000540017 GNPNAT1Q96EK6 184 aaPredicted RBP13.03□□□□□ -0.32
SNRPA1-203ENST00000540017 C20orf144Q9BQM9 153 aa13.03□□□□□ -0.32
SNRPA1-203ENST00000540017 KLLNB2CW77 178 aa13.02□□□□□ -0.33
SNRPA1-203ENST00000540017 IGLL5B9A064 214 aa13.02□□□□□ -0.33
SNRPA1-203ENST00000540017 H7BYZ3 331 aa13.02□□□□□ -0.33
SNRPA1-203ENST00000540017 MBP02144 154 aa13.02□□□□□ -0.33
SNRPA1-203ENST00000540017 CD300CQ08708 224 aa13.02□□□□□ -0.33
SNRPA1-203ENST00000540017 NIPSNAP3BQ9BS92 247 aa13.02□□□□□ -0.33
SNRPA1-203ENST00000540017 DEFB131BA0A096LNP1 70 aa13.01□□□□□ -0.33
SNRPA1-203ENST00000540017 PGPA6NDG6 321 aa13.01□□□□□ -0.33
SNRPA1-203ENST00000540017 TAAR5O14804 337 aa13.01□□□□□ -0.33
SNRPA1-203ENST00000540017 CRISP2P16562 243 aa13.01□□□□□ -0.33
SNRPA1-203ENST00000540017 BTN1A1Q13410 526 aa13.01□□□□□ -0.33
SNRPA1-203ENST00000540017 ZNF726P1Q15940 193 aa13.01□□□□□ -0.33
SNRPA1-203ENST00000540017 TMEM78Q5T7P6 136 aa13.01□□□□□ -0.33
SNRPA1-203ENST00000540017 PRR9Q5T870 116 aa13.01□□□□□ -0.33
SNRPA1-203ENST00000540017 KCNRGQ8N5I3 272 aa13.01□□□□□ -0.33
SNRPA1-203ENST00000540017 ZFAND2AQ8N6M9 145 aa13.01□□□□□ -0.33
SNRPA1-203ENST00000540017 Q8TAT8 98 aa13.01□□□□□ -0.33
SNRPA1-203ENST00000540017 HYLS1Q96M11 299 aa13.01□□□□□ -0.33
SNRPA1-203ENST00000540017 OTORQ9NRC9 128 aa13.01□□□□□ -0.33
SNRPA1-203ENST00000540017 ZNF492Q9P255 531 aa13.01□□□□□ -0.33
SNRPA1-203ENST00000540017 APLNQ9ULZ1 77 aa13.01□□□□□ -0.33
SNRPA1-203ENST00000540017 C7orf71A4D174 169 aa13□□□□□ -0.33
SNRPA1-203ENST00000540017 HMSDA8MTL9 139 aa13□□□□□ -0.33
SNRPA1-203ENST00000540017 DIRC3C9JPN6 131 aa13□□□□□ -0.33
SNRPA1-203ENST00000540017 ZNF324O75467 553 aaPredicted RBP13□□□□□ -0.33
SNRPA1-203ENST00000540017 SLC25A5P05141 298 aaKnown RBP13□□□□□ -0.33
SNRPA1-203ENST00000540017 GCHFRP30047 84 aa13□□□□□ -0.33
SNRPA1-203ENST00000540017 CSN1S1P47710 185 aa13□□□□□ -0.33
SNRPA1-203ENST00000540017 Q6ZQT7 251 aa13□□□□□ -0.33
SNRPA1-203ENST00000540017 SUN5Q8TC36 379 aa13□□□□□ -0.33
SNRPA1-203ENST00000540017 RNASE8Q8TDE3 154 aaKnown RBP13□□□□□ -0.33
SNRPA1-203ENST00000540017 ACTR3CQ9C0K3 210 aaPredicted RBP13□□□□□ -0.33
SNRPA1-203ENST00000540017 TEX48A0A1B0GUV7 120 aa12.99□□□□□ -0.33
SNRPA1-203ENST00000540017 RBAKDNA6NC62 111 aa12.99□□□□□ -0.33
SNRPA1-203ENST00000540017 LY6G6CO95867 125 aa12.99□□□□□ -0.33
SNRPA1-203ENST00000540017 RNASE4P34096 147 aaKnown RBP12.99□□□□□ -0.33
SNRPA1-203ENST00000540017 ZNF138P52744 262 aa12.99□□□□□ -0.33
SNRPA1-203ENST00000540017 ZNF345Q14585 488 aa12.99□□□□□ -0.33
SNRPA1-203ENST00000540017 Q6ZNX1 250 aa12.99□□□□□ -0.33
SNRPA1-203ENST00000540017 C16orf74Q96GX8 76 aa12.99□□□□□ -0.33
SNRPA1-203ENST00000540017 ST6GAL2Q96JF0 529 aa12.99□□□□□ -0.33
SNRPA1-203ENST00000540017 IGHV4-4A0A075B6R2 117 aa12.98□□□□□ -0.33
SNRPA1-203ENST00000540017 GPX1P07203 203 aa12.98□□□□□ -0.33
SNRPA1-203ENST00000540017 RXFP4Q8TDU9 374 aa12.98□□□□□ -0.33
SNRPA1-203ENST00000540017 TMEM263Q8WUH6 116 aaKnown RBP12.98□□□□□ -0.33
SNRPA1-203ENST00000540017 ARPC5LQ9BPX5 153 aa12.98□□□□□ -0.33
SNRPA1-203ENST00000540017 RPH3ALQ9UNE2 315 aa12.98□□□□□ -0.33
SNRPA1-203ENST00000540017 LYRM9A8MSI8 78 aa12.97□□□□□ -0.33
SNRPA1-203ENST00000540017 NMBP08949 121 aa12.97□□□□□ -0.33
SNRPA1-203ENST00000540017 DAD1P61803 113 aa12.97□□□□□ -0.33
SNRPA1-203ENST00000540017 GNG5P63218 68 aa12.97□□□□□ -0.33
SNRPA1-203ENST00000540017 ZNF493Q6ZR52 646 aa12.97□□□□□ -0.33
SNRPA1-203ENST00000540017 VPS13DQ5THJ4 4388 aa12.97□□□□□ -0.33
SNRPA1-203ENST00000540017 CXorf1O96002 111 aa12.96□□□□□ -0.33
SNRPA1-203ENST00000540017 DEFB130BP0DP73 79 aa12.96□□□□□ -0.33
SNRPA1-203ENST00000540017 DEFB130AP0DP74 79 aa12.96□□□□□ -0.33
SNRPA1-203ENST00000540017 GOLT1AQ6ZVE7 132 aa12.96□□□□□ -0.33
SNRPA1-203ENST00000540017 CMTM2Q8TAZ6 248 aa12.96□□□□□ -0.33
SNRPA1-203ENST00000540017 PYGO2Q9BRQ0 406 aa12.96□□□□□ -0.33
SNRPA1-203ENST00000540017 NOP10Q9NPE3 64 aaKnown RBP12.96□□□□□ -0.33
SNRPA1-203ENST00000540017 TIMM8BQ9Y5J9 83 aaPredicted RBP12.96□□□□□ -0.33
SNRPA1-203ENST00000540017 CTXND1A0A1B0GTU2 59 aa12.95□□□□□ -0.34
SNRPA1-203ENST00000540017 HTN3P15516 51 aa12.95□□□□□ -0.34
SNRPA1-203ENST00000540017 TCTAP57738 103 aa12.95□□□□□ -0.34
SNRPA1-203ENST00000540017 FAM74A1Q5RGS3 127 aa12.95□□□□□ -0.34
SNRPA1-203ENST00000540017 AKR1C8PQ5T2L2 129 aa12.95□□□□□ -0.34
SNRPA1-203ENST00000540017 CCDC28AQ8IWP9 274 aa12.95□□□□□ -0.34
SNRPA1-203ENST00000540017 TMPRSS5Q9H3S3 457 aa12.95□□□□□ -0.34
SNRPA1-203ENST00000540017 TRAV8-1A0A0A6YYK1 113 aa12.94□□□□□ -0.34
SNRPA1-203ENST00000540017 A0A0D9SG52 128 aa12.94□□□□□ -0.34
SNRPA1-203ENST00000540017 TRBV7-9A0A0J9YWB2 115 aa12.94□□□□□ -0.34
SNRPA1-203ENST00000540017 GGTLC3B5MD39 225 aa12.94□□□□□ -0.34
SNRPA1-203ENST00000540017 BCL2L11O43521 198 aa12.94□□□□□ -0.34
SNRPA1-203ENST00000540017 LGALS9CQ6DKI2 356 aa12.94□□□□□ -0.34
SNRPA1-203ENST00000540017 ARL6IP6Q8N6S5 226 aa12.94□□□□□ -0.34
SNRPA1-203ENST00000540017 TVP23CQ96ET8 276 aa12.94□□□□□ -0.34
SNRPA1-203ENST00000540017 LINC00467Q9BRT7 94 aa12.94□□□□□ -0.34
SNRPA1-203ENST00000540017 TMEM167BQ9NRX6 74 aa12.94□□□□□ -0.34
SNRPA1-203ENST00000540017 FHITP49789 147 aa12.93□□□□□ -0.34
SNRPA1-203ENST00000540017 FGF8P55075 233 aaPredicted RBP12.93□□□□□ -0.34
SNRPA1-203ENST00000540017 SUMO1P63165 101 aaKnown RBP12.93□□□□□ -0.34
SNRPA1-203ENST00000540017 IQCF2Q8IXL9 164 aa12.93□□□□□ -0.34
SNRPA1-203ENST00000540017 TP53TG3Q9ULZ0 132 aa12.93□□□□□ -0.34
SNRPA1-203ENST00000540017 TMUB2Q71RG4 321 aa12.92□□□□□ -0.34
SNRPA1-203ENST00000540017 EIF4E3Q8N5X7 224 aaKnown RBP12.92□□□□□ -0.34
SNRPA1-203ENST00000540017 C5orf17Q8NAS9 161 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 198.9 ms