RNA–Protein interactions for RNA: ENST00000536675.2

CDH20-202, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH20, Length 2,855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-202ENST00000536675 ORM1P02763 201 aa11.28□□□□□ -0.6
CDH20-202ENST00000536675 HLA-DMBP28068 263 aa11.28□□□□□ -0.6
CDH20-202ENST00000536675 NXT2Q9NPJ8 142 aaKnown RBP11.28□□□□□ -0.6
CDH20-202ENST00000536675 IGLL5B9A064 214 aa11.27□□□□□ -0.6
CDH20-202ENST00000536675 RAB1BQ9H0U4 201 aa11.27□□□□□ -0.6
CDH20-202ENST00000536675 DMXL1Q9Y485 3027 aa11.27□□□□□ -0.6
CDH20-202ENST00000536675 MAP1BP46821 2468 aaKnown RBP11.27□□□□□ -0.6
CDH20-202ENST00000536675 IGHG4P01861 327 aa11.27□□□□□ -0.61
CDH20-202ENST00000536675 SCGB1A1P11684 91 aa11.27□□□□□ -0.61
CDH20-202ENST00000536675 S100A7AQ86SG5 101 aa11.27□□□□□ -0.61
CDH20-202ENST00000536675 MAPKAPK5-AS1Q8N8E1 139 aa11.27□□□□□ -0.61
CDH20-202ENST00000536675 RNF5Q99942 180 aa11.27□□□□□ -0.61
CDH20-202ENST00000536675 TIMM23O14925 209 aa11.26□□□□□ -0.61
CDH20-202ENST00000536675 CD300EQ496F6 205 aaPredicted RBP11.26□□□□□ -0.61
CDH20-202ENST00000536675 FOXI2Q6ZQN5 318 aa11.26□□□□□ -0.61
CDH20-202ENST00000536675 IGFBPL1Q8WX77 278 aa11.26□□□□□ -0.61
CDH20-202ENST00000536675 CNFNQ9BYD5 112 aa11.26□□□□□ -0.61
CDH20-202ENST00000536675 DYNLRB1Q9NP97 96 aa11.26□□□□□ -0.61
CDH20-202ENST00000536675 TMEM160Q9NX00 188 aa11.26□□□□□ -0.61
CDH20-202ENST00000536675 GAGE12HA6NDE8 117 aa11.26□□□□□ -0.61
CDH20-202ENST00000536675 F8W735 103 aaPredicted RBP11.26□□□□□ -0.61
CDH20-202ENST00000536675 LY6LH3BQJ8 138 aa11.26□□□□□ -0.61
CDH20-202ENST00000536675 TRAV40A0A0B4J280 105 aa11.26□□□□□ -0.61
CDH20-202ENST00000536675 F8W1H4 67 aa11.26□□□□□ -0.61
CDH20-202ENST00000536675 ATP5LO75964 103 aa11.26□□□□□ -0.61
CDH20-202ENST00000536675 PPIFP30405 207 aaKnown RBP11.26□□□□□ -0.61
CDH20-202ENST00000536675 SMPXQ9UHP9 88 aa11.26□□□□□ -0.61
CDH20-202ENST00000536675 SMAD5-AS1Q9Y6J3 95 aa11.26□□□□□ -0.61
CDH20-202ENST00000536675 MFAP4P55083 255 aa11.25□□□□□ -0.61
CDH20-202ENST00000536675 SRSF1Q07955 248 aaKnown RBP eCLIP11.25□□□□□ -0.61
CDH20-202ENST00000536675 FANCD2OSQ96PS1 177 aa11.25□□□□□ -0.61
CDH20-202ENST00000536675 A0A0G2JNJ9 132 aa11.25□□□□□ -0.61
CDH20-202ENST00000536675 H3BMG7 143 aa11.25□□□□□ -0.61
CDH20-202ENST00000536675 HLA-DRB4P13762 266 aa11.25□□□□□ -0.61
CDH20-202ENST00000536675 RPL7P18124 248 aaKnown RBP11.25□□□□□ -0.61
CDH20-202ENST00000536675 SRSF2Q01130 221 aaKnown RBP11.25□□□□□ -0.61
CDH20-202ENST00000536675 SH2D6Q7Z4S9 175 aa11.25□□□□□ -0.61
CDH20-202ENST00000536675 FAM57AQ8TBR7 257 aa11.25□□□□□ -0.61
CDH20-202ENST00000536675 ZNF479Q96JC4 524 aa11.25□□□□□ -0.61
CDH20-202ENST00000536675 MRPL35Q9NZE8 188 aaKnown RBP11.25□□□□□ -0.61
CDH20-202ENST00000536675 Q9UFV3 132 aa11.25□□□□□ -0.61
CDH20-202ENST00000536675 HLA-DRB4X5D2U9 266 aa11.25□□□□□ -0.61
CDH20-202ENST00000536675 IGLV2-18A0A075B6J9 118 aa11.24□□□□□ -0.61
CDH20-202ENST00000536675 IGHV3-23P01764 117 aa11.24□□□□□ -0.61
CDH20-202ENST00000536675 Q8N8P6 123 aa11.24□□□□□ -0.61
CDH20-202ENST00000536675 LYNX1G3V0Z9 82 aa11.24□□□□□ -0.61
CDH20-202ENST00000536675 NBR2O15453 112 aa11.24□□□□□ -0.61
CDH20-202ENST00000536675 LYNX1P0DP58 116 aa11.24□□□□□ -0.61
CDH20-202ENST00000536675 C12orf74Q32Q52 190 aa11.24□□□□□ -0.61
CDH20-202ENST00000536675 LINC01559Q495D7 138 aa11.24□□□□□ -0.61
CDH20-202ENST00000536675 DTX2Q86UW9 622 aa11.24□□□□□ -0.61
CDH20-202ENST00000536675 ARPC1AQ92747 370 aa11.24□□□□□ -0.61
CDH20-202ENST00000536675 IGLV11-55A0A075B6I3 123 aa11.23□□□□□ -0.61
CDH20-202ENST00000536675 FABP5P3A8MUU1 101 aa11.23□□□□□ -0.61
CDH20-202ENST00000536675 ERCC8Q13216 396 aa11.23□□□□□ -0.61
CDH20-202ENST00000536675 Q6ZS92 163 aa11.23□□□□□ -0.61
CDH20-202ENST00000536675 ARHGAP32A7KAX9 2087 aa11.23□□□□□ -0.61
CDH20-202ENST00000536675 IGFL3Q6UXB1 125 aa11.23□□□□□ -0.61
CDH20-202ENST00000536675 SPAG8Q99932 426 aaPredicted RBP11.23□□□□□ -0.61
CDH20-202ENST00000536675 BSNQ9UPA5 3926 aa11.23□□□□□ -0.61
CDH20-202ENST00000536675 SPAARA0A1B0GVQ0 90 aa11.22□□□□□ -0.61
CDH20-202ENST00000536675 E7EQL1 145 aa11.22□□□□□ -0.61
CDH20-202ENST00000536675 ETDBQ3ZM63 59 aa11.22□□□□□ -0.61
CDH20-202ENST00000536675 AMTNQ6UX39 209 aa11.22□□□□□ -0.61
CDH20-202ENST00000536675 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.22□□□□□ -0.61
CDH20-202ENST00000536675 DYNAPQ8N1N2 210 aa11.22□□□□□ -0.61
CDH20-202ENST00000536675 ZNF48Q96MX3 618 aaPredicted RBP11.22□□□□□ -0.61
CDH20-202ENST00000536675 POLEQ07864 2286 aa11.22□□□□□ -0.61
CDH20-202ENST00000536675 CCDC144NLQ6NUI1 221 aa11.22□□□□□ -0.61
CDH20-202ENST00000536675 MTURNQ8N3F0 131 aa11.22□□□□□ -0.61
CDH20-202ENST00000536675 SPATA25Q9BR10 227 aa11.22□□□□□ -0.61
CDH20-202ENST00000536675 IGHV3OR16-8A0A075B7F1 116 aa11.21□□□□□ -0.61
CDH20-202ENST00000536675 PRAC2D3DTV9 90 aa11.21□□□□□ -0.61
CDH20-202ENST00000536675 J3QR89 54 aa11.21□□□□□ -0.61
CDH20-202ENST00000536675 TRGV3P03979 118 aa11.21□□□□□ -0.61
CDH20-202ENST00000536675 TAL2Q16559 108 aa11.21□□□□□ -0.61
CDH20-202ENST00000536675 C21orf62Q9NYP8 219 aa11.21□□□□□ -0.61
CDH20-202ENST00000536675 PRRG2O14669 202 aa11.21□□□□□ -0.62
CDH20-202ENST00000536675 DEFB124Q8NES8 71 aa11.21□□□□□ -0.62
CDH20-202ENST00000536675 TTC9CQ8N5M4 171 aa11.2□□□□□ -0.62
CDH20-202ENST00000536675 MYOZ3Q8TDC0 251 aa11.2□□□□□ -0.62
CDH20-202ENST00000536675 CFHR4Q92496 578 aa11.2□□□□□ -0.62
CDH20-202ENST00000536675 HIST1H4GQ99525 98 aa11.2□□□□□ -0.62
CDH20-202ENST00000536675 ONECUT1Q9UBC0 465 aa11.2□□□□□ -0.62
CDH20-202ENST00000536675 BDP1A6H8Y1 2624 aa11.2□□□□□ -0.62
CDH20-202ENST00000536675 CNOT1A5YKK6 2376 aaKnown RBP11.2□□□□□ -0.62
CDH20-202ENST00000536675 NDUFA3O95167 84 aa11.2□□□□□ -0.62
CDH20-202ENST00000536675 NPBQ8NG41 125 aa11.2□□□□□ -0.62
CDH20-202ENST00000536675 A0A087WX48 190 aa11.19□□□□□ -0.62
CDH20-202ENST00000536675 TRAV26-2A0A0B4J265 109 aa11.19□□□□□ -0.62
CDH20-202ENST00000536675 INSL3P51460 131 aa11.19□□□□□ -0.62
CDH20-202ENST00000536675 LAGE3Q14657 143 aa11.19□□□□□ -0.62
CDH20-202ENST00000536675 RRN3P1Q2M238 152 aa11.19□□□□□ -0.62
CDH20-202ENST00000536675 GAGE13Q4V321 117 aa11.19□□□□□ -0.62
CDH20-202ENST00000536675 IL17RELQ6ZVW7 336 aa11.19□□□□□ -0.62
CDH20-202ENST00000536675 NRACQ8N912 160 aa11.19□□□□□ -0.62
CDH20-202ENST00000536675 PRO0461Q9UI25 63 aa11.19□□□□□ -0.62
CDH20-202ENST00000536675 IGKV3D-20A0A0C4DH25 116 aa11.19□□□□□ -0.62
CDH20-202ENST00000536675 ATP6V0BQ99437 205 aa11.19□□□□□ -0.62
CDH20-202ENST00000536675 DCHS2Q6V1P9 2916 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms