RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 PRR9Q5T870 116 aa9.34□□□□□ -0.91
PRKDC-206ENST00000536429 RPL7L1Q6DKI1 246 aaKnown RBP9.34□□□□□ -0.91
PRKDC-206ENST00000536429 Q6ZQT7 251 aa9.34□□□□□ -0.91
PRKDC-206ENST00000536429 TMEM256Q8N2U0 113 aa9.34□□□□□ -0.91
PRKDC-206ENST00000536429 OR10G4Q8NGN3 311 aa9.34□□□□□ -0.91
PRKDC-206ENST00000536429 OR10G9Q8NGN4 311 aa9.34□□□□□ -0.91
PRKDC-206ENST00000536429 OR10G7Q8NGN6 311 aa9.34□□□□□ -0.91
PRKDC-206ENST00000536429 Q9H3A6 140 aa9.34□□□□□ -0.91
PRKDC-206ENST00000536429 H7BYZ3 331 aa9.33□□□□□ -0.92
PRKDC-206ENST00000536429 HTN3P15516 51 aa9.33□□□□□ -0.92
PRKDC-206ENST00000536429 TAS2R45P59539 299 aa9.33□□□□□ -0.92
PRKDC-206ENST00000536429 CD300CQ08708 224 aa9.33□□□□□ -0.92
PRKDC-206ENST00000536429 BTN1A1Q13410 526 aa9.33□□□□□ -0.92
PRKDC-206ENST00000536429 LGALS9CQ6DKI2 356 aa9.33□□□□□ -0.92
PRKDC-206ENST00000536429 C9orf47Q6ZRZ4 202 aa9.33□□□□□ -0.92
PRKDC-206ENST00000536429 INO80EQ8NBZ0 244 aaPredicted RBP9.33□□□□□ -0.92
PRKDC-206ENST00000536429 OR2G3Q8NGZ4 309 aa9.33□□□□□ -0.92
PRKDC-206ENST00000536429 Q8TAT8 98 aa9.33□□□□□ -0.92
PRKDC-206ENST00000536429 RNASE8Q8TDE3 154 aaKnown RBP9.33□□□□□ -0.92
PRKDC-206ENST00000536429 LINC00477Q96M19 166 aa9.33□□□□□ -0.92
PRKDC-206ENST00000536429 TEX48A0A1B0GUV7 120 aa9.32□□□□□ -0.92
PRKDC-206ENST00000536429 A0A1W2PPV4 95 aa9.32□□□□□ -0.92
PRKDC-206ENST00000536429 KLLNB2CW77 178 aa9.32□□□□□ -0.92
PRKDC-206ENST00000536429 DEFB130BP0DP73 79 aa9.32□□□□□ -0.92
PRKDC-206ENST00000536429 DEFB130AP0DP74 79 aa9.32□□□□□ -0.92
PRKDC-206ENST00000536429 DAD1P61803 113 aa9.32□□□□□ -0.92
PRKDC-206ENST00000536429 ZFAND2AQ8N6M9 145 aa9.32□□□□□ -0.92
PRKDC-206ENST00000536429 C20orf144Q9BQM9 153 aa9.32□□□□□ -0.92
PRKDC-206ENST00000536429 PSMG3Q9BT73 122 aaPredicted RBP9.32□□□□□ -0.92
PRKDC-206ENST00000536429 DNAH17Q9UFH2 4485 aa9.31□□□□□ -0.92
PRKDC-206ENST00000536429 C7orf71A4D174 169 aa9.31□□□□□ -0.92
PRKDC-206ENST00000536429 LYRM9A8MSI8 78 aa9.31□□□□□ -0.92
PRKDC-206ENST00000536429 ARPC5O15511 151 aa9.31□□□□□ -0.92
PRKDC-206ENST00000536429 ZNF324O75467 553 aaPredicted RBP9.31□□□□□ -0.92
PRKDC-206ENST00000536429 SLC25A5P05141 298 aaKnown RBP9.31□□□□□ -0.92
PRKDC-206ENST00000536429 ARL14EPLP0DKL9 152 aa9.31□□□□□ -0.92
PRKDC-206ENST00000536429 CRISP2P16562 243 aa9.31□□□□□ -0.92
PRKDC-206ENST00000536429 RNASE4P34096 147 aaKnown RBP9.31□□□□□ -0.92
PRKDC-206ENST00000536429 CDC34P49427 236 aaPredicted RBP9.31□□□□□ -0.92
PRKDC-206ENST00000536429 TCTAP57738 103 aa9.31□□□□□ -0.92
PRKDC-206ENST00000536429 SSX7Q7RTT5 188 aa9.31□□□□□ -0.92
PRKDC-206ENST00000536429 TMEM263Q8WUH6 116 aaKnown RBP9.31□□□□□ -0.92
PRKDC-206ENST00000536429 C16orf74Q96GX8 76 aa9.31□□□□□ -0.92
PRKDC-206ENST00000536429 HYLS1Q96M11 299 aa9.31□□□□□ -0.92
PRKDC-206ENST00000536429 NOP10Q9NPE3 64 aaKnown RBP9.31□□□□□ -0.92
PRKDC-206ENST00000536429 ZNF492Q9P255 531 aa9.31□□□□□ -0.92
PRKDC-206ENST00000536429 FAT2Q9NYQ8 4349 aa9.31□□□□□ -0.92
PRKDC-206ENST00000536429 DIRC3C9JPN6 131 aa9.3□□□□□ -0.92
PRKDC-206ENST00000536429 TMEM78Q5T7P6 136 aa9.3□□□□□ -0.92
PRKDC-206ENST00000536429 PQLC2Q6ZP29 291 aa9.3□□□□□ -0.92
PRKDC-206ENST00000536429 LYPD1Q8N2G4 141 aa9.3□□□□□ -0.92
PRKDC-206ENST00000536429 RAB24Q969Q5 203 aa9.3□□□□□ -0.92
PRKDC-206ENST00000536429 CYTL1Q9NRR1 136 aa9.3□□□□□ -0.92
PRKDC-206ENST00000536429 PGPA6NDG6 321 aa9.29□□□□□ -0.92
PRKDC-206ENST00000536429 STAG3L2P0CL84 134 aa9.29□□□□□ -0.92
PRKDC-206ENST00000536429 STAG3L3P0CL85 134 aa9.29□□□□□ -0.92
PRKDC-206ENST00000536429 CSN1S1P47710 185 aa9.29□□□□□ -0.92
PRKDC-206ENST00000536429 ZNF138P52744 262 aa9.29□□□□□ -0.92
PRKDC-206ENST00000536429 GNG5P63218 68 aa9.29□□□□□ -0.92
PRKDC-206ENST00000536429 TMEM88Q6PEY1 159 aa9.29□□□□□ -0.92
PRKDC-206ENST00000536429 OR11H4Q8NGC9 324 aa9.29□□□□□ -0.92
PRKDC-206ENST00000536429 NDUFAF3Q9BU61 184 aa9.29□□□□□ -0.92
PRKDC-206ENST00000536429 OTORQ9NRC9 128 aa9.29□□□□□ -0.92
PRKDC-206ENST00000536429 RPH3ALQ9UNE2 315 aa9.29□□□□□ -0.92
PRKDC-206ENST00000536429 TIMM8BQ9Y5J9 83 aaPredicted RBP9.29□□□□□ -0.92
PRKDC-206ENST00000536429 BORCS7-ASMTA0A0B4J1R7 106 aa9.28□□□□□ -0.92
PRKDC-206ENST00000536429 RBAKDNA6NC62 111 aa9.28□□□□□ -0.92
PRKDC-206ENST00000536429 GPX1P07203 203 aa9.28□□□□□ -0.92
PRKDC-206ENST00000536429 SERF2P84101 59 aa9.28□□□□□ -0.92
PRKDC-206ENST00000536429 ZNF726P1Q15940 193 aa9.28□□□□□ -0.92
PRKDC-206ENST00000536429 ZNF493Q6ZR52 646 aa9.28□□□□□ -0.92
PRKDC-206ENST00000536429 CCDC28AQ8IWP9 274 aa9.28□□□□□ -0.92
PRKDC-206ENST00000536429 PYGO2Q9BRQ0 406 aa9.28□□□□□ -0.92
PRKDC-206ENST00000536429 TP53TG3Q9ULZ0 132 aa9.28□□□□□ -0.92
PRKDC-206ENST00000536429 HECTD4Q9Y4D8 3996 aa9.28□□□□□ -0.92
PRKDC-206ENST00000536429 MBP02144 154 aa9.27□□□□□ -0.93
PRKDC-206ENST00000536429 GCHFRP30047 84 aa9.27□□□□□ -0.93
PRKDC-206ENST00000536429 GOLT1AQ6ZVE7 132 aa9.27□□□□□ -0.93
PRKDC-206ENST00000536429 C11orf72Q8NBR9 251 aa9.27□□□□□ -0.93
PRKDC-206ENST00000536429 SUN5Q8TC36 379 aa9.27□□□□□ -0.93
PRKDC-206ENST00000536429 GNPNAT1Q96EK6 184 aaPredicted RBP9.27□□□□□ -0.93
PRKDC-206ENST00000536429 TRAV8-1A0A0A6YYK1 113 aa9.26□□□□□ -0.93
PRKDC-206ENST00000536429 NMBP08949 121 aa9.26□□□□□ -0.93
PRKDC-206ENST00000536429 LINC00612Q8N6U2 182 aa9.26□□□□□ -0.93
PRKDC-206ENST00000536429 CMTM2Q8TAZ6 248 aa9.26□□□□□ -0.93
PRKDC-206ENST00000536429 RXFP4Q8TDU9 374 aa9.26□□□□□ -0.93
PRKDC-206ENST00000536429 TVP23CQ96ET8 276 aa9.26□□□□□ -0.93
PRKDC-206ENST00000536429 SGK494Q96LW2 274 aa9.26□□□□□ -0.93
PRKDC-206ENST00000536429 LINC00467Q9BRT7 94 aa9.26□□□□□ -0.93
PRKDC-206ENST00000536429 ACTR3CQ9C0K3 210 aaPredicted RBP9.26□□□□□ -0.93
PRKDC-206ENST00000536429 GSN-AS1Q9NRJ2 163 aa9.26□□□□□ -0.93
PRKDC-206ENST00000536429 GAGE12BA1L429 117 aa9.25□□□□□ -0.93
PRKDC-206ENST00000536429 CBY3A6NI87 242 aa9.25□□□□□ -0.93
PRKDC-206ENST00000536429 GGTLC3B5MD39 225 aa9.25□□□□□ -0.93
PRKDC-206ENST00000536429 F5H768 121 aa9.25□□□□□ -0.93
PRKDC-206ENST00000536429 GAGE7O76087 117 aa9.25□□□□□ -0.93
PRKDC-206ENST00000536429 GAGE12FP0CL80 117 aa9.25□□□□□ -0.93
PRKDC-206ENST00000536429 GAGE12GP0CL81 117 aa9.25□□□□□ -0.93
PRKDC-206ENST00000536429 GAGE12IP0CL82 117 aa9.25□□□□□ -0.93
PRKDC-206ENST00000536429 Q6ZTI0 123 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 162.9 ms