RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 LEPP41159 167 aa9.83□□□□□ -0.84
RPAIN-205ENST00000536255 FHITP49789 147 aa9.83□□□□□ -0.84
RPAIN-205ENST00000536255 C9orf47Q6ZRZ4 202 aa9.83□□□□□ -0.84
RPAIN-205ENST00000536255 NKX6-2Q9C056 277 aaPredicted RBP9.83□□□□□ -0.84
RPAIN-205ENST00000536255 IGKV2-40A0A087WW87 121 aaPredicted RBP9.82□□□□□ -0.84
RPAIN-205ENST00000536255 DIRC3C9JPN6 131 aa9.82□□□□□ -0.84
RPAIN-205ENST00000536255 IGKV2D-40P01614 121 aaPredicted RBP9.82□□□□□ -0.84
RPAIN-205ENST00000536255 FGF8P55075 233 aaPredicted RBP9.82□□□□□ -0.84
RPAIN-205ENST00000536255 C5orf17Q8NAS9 161 aa9.82□□□□□ -0.84
RPAIN-205ENST00000536255 SFT2D1Q8WV19 159 aa9.82□□□□□ -0.84
RPAIN-205ENST00000536255 TMEM208Q9BTX3 173 aa9.82□□□□□ -0.84
RPAIN-205ENST00000536255 RYR3Q15413 4870 aa9.82□□□□□ -0.84
RPAIN-205ENST00000536255 IGHV3OR16-12A0A075B7B8 117 aa9.81□□□□□ -0.84
RPAIN-205ENST00000536255 SERTM2A0A1B0GWG4 89 aa9.81□□□□□ -0.84
RPAIN-205ENST00000536255 SMIM9A6NGZ8 99 aa9.81□□□□□ -0.84
RPAIN-205ENST00000536255 TEX46H3BTG2 121 aa9.81□□□□□ -0.84
RPAIN-205ENST00000536255 K7EQM0 130 aa9.81□□□□□ -0.84
RPAIN-205ENST00000536255 H2AFB1P0C5Y9 115 aa9.81□□□□□ -0.84
RPAIN-205ENST00000536255 CT45A10P0DMU9 189 aa9.81□□□□□ -0.84
RPAIN-205ENST00000536255 ERCC8Q13216 396 aa9.81□□□□□ -0.84
RPAIN-205ENST00000536255 ZNF705AQ6ZN79 300 aaPredicted RBP9.81□□□□□ -0.84
RPAIN-205ENST00000536255 TMEM256Q8N2U0 113 aa9.81□□□□□ -0.84
RPAIN-205ENST00000536255 MBD3L1Q8WWY6 194 aa9.81□□□□□ -0.84
RPAIN-205ENST00000536255 NEU1Q99519 415 aa9.81□□□□□ -0.84
RPAIN-205ENST00000536255 C20orf144Q9BQM9 153 aa9.81□□□□□ -0.84
RPAIN-205ENST00000536255 AGPAT4-IT1Q9H0P7 198 aa9.81□□□□□ -0.84
RPAIN-205ENST00000536255 C11orf68Q9H3H3 251 aaKnown RBP9.81□□□□□ -0.84
RPAIN-205ENST00000536255 TRAV12-2A0A075B6T6 113 aa9.8□□□□□ -0.84
RPAIN-205ENST00000536255 TRBV7-9A0A0J9YWB2 115 aa9.8□□□□□ -0.84
RPAIN-205ENST00000536255 CRXO43186 299 aaPredicted RBP9.8□□□□□ -0.84
RPAIN-205ENST00000536255 SULT1A2P50226 295 aa9.8□□□□□ -0.84
RPAIN-205ENST00000536255 PPT1P50897 306 aa9.8□□□□□ -0.84
RPAIN-205ENST00000536255 ZNF138P52744 262 aa9.8□□□□□ -0.84
RPAIN-205ENST00000536255 NKX2-5P52952 324 aaPredicted RBP9.8□□□□□ -0.84
RPAIN-205ENST00000536255 SUMO1P63165 101 aaKnown RBP9.8□□□□□ -0.84
RPAIN-205ENST00000536255 VGLL1Q99990 258 aa9.8□□□□□ -0.84
RPAIN-205ENST00000536255 TMPRSS5Q9H3S3 457 aa9.8□□□□□ -0.84
RPAIN-205ENST00000536255 ZNF492Q9P255 531 aa9.8□□□□□ -0.84
RPAIN-205ENST00000536255 RPH3ALQ9UNE2 315 aa9.8□□□□□ -0.84
RPAIN-205ENST00000536255 ARL2-SNX15V9GYD0 113 aa9.8□□□□□ -0.84
RPAIN-205ENST00000536255 X6R8D5 127 aa9.8□□□□□ -0.84
RPAIN-205ENST00000536255 DYNC2H1Q8NCM8 4307 aaKnown RBP9.79□□□□□ -0.84
RPAIN-205ENST00000536255 HBE1P02100 147 aa9.79□□□□□ -0.84
RPAIN-205ENST00000536255 NMBP08949 121 aa9.79□□□□□ -0.84
RPAIN-205ENST00000536255 UBE2G2P60604 165 aa9.79□□□□□ -0.84
RPAIN-205ENST00000536255 GOLT1AQ6ZVE7 132 aa9.79□□□□□ -0.84
RPAIN-205ENST00000536255 C1orf158Q8N1D5 194 aa9.79□□□□□ -0.84
RPAIN-205ENST00000536255 Q8NAQ8 132 aa9.79□□□□□ -0.84
RPAIN-205ENST00000536255 LENEPQ9Y5L5 61 aa9.79□□□□□ -0.84
RPAIN-205ENST00000536255 IGHV4-28A0A0C4DH34 117 aa9.78□□□□□ -0.84
RPAIN-205ENST00000536255 TMEM189A5PLL7 270 aa9.78□□□□□ -0.84
RPAIN-205ENST00000536255 FAM74A7A6NL05 159 aa9.78□□□□□ -0.84
RPAIN-205ENST00000536255 GGTLC3B5MD39 225 aa9.78□□□□□ -0.84
RPAIN-205ENST00000536255 IFNA7P01567 189 aa9.78□□□□□ -0.84
RPAIN-205ENST00000536255 TCRAP04437 139 aa9.78□□□□□ -0.84
RPAIN-205ENST00000536255 RRN3P1Q2M238 152 aa9.78□□□□□ -0.84
RPAIN-205ENST00000536255 LINC01587Q99440 93 aa9.78□□□□□ -0.84
RPAIN-205ENST00000536255 TCEAL7Q9BRU2 100 aa9.78□□□□□ -0.84
RPAIN-205ENST00000536255 NIPSNAP3BQ9BS92 247 aa9.78□□□□□ -0.84
RPAIN-205ENST00000536255 EPDR1Q9UM22 224 aa9.78□□□□□ -0.84
RPAIN-205ENST00000536255 TRAV1-1A0A0B4J248 108 aa9.77□□□□□ -0.85
RPAIN-205ENST00000536255 CXorf65A6NEN9 183 aa9.77□□□□□ -0.85
RPAIN-205ENST00000536255 FBLL1A6NHQ2 334 aaKnown RBP9.77□□□□□ -0.85
RPAIN-205ENST00000536255 KLLNB2CW77 178 aa9.77□□□□□ -0.85
RPAIN-205ENST00000536255 H7BYZ3 331 aa9.77□□□□□ -0.85
RPAIN-205ENST00000536255 J3KRW8 73 aa9.77□□□□□ -0.85
RPAIN-205ENST00000536255 GPX1P07203 203 aa9.77□□□□□ -0.85
RPAIN-205ENST00000536255 CRISP2P16562 243 aa9.77□□□□□ -0.85
RPAIN-205ENST00000536255 GNG5P63218 68 aa9.77□□□□□ -0.85
RPAIN-205ENST00000536255 PMS2P11Q13670 270 aa9.77□□□□□ -0.85
RPAIN-205ENST00000536255 GFI1BQ5VTD9 330 aa9.77□□□□□ -0.85
RPAIN-205ENST00000536255 CST9LP1Q5W188 147 aa9.77□□□□□ -0.85
RPAIN-205ENST00000536255 CYB561D1Q8N8Q1 229 aa9.77□□□□□ -0.85
RPAIN-205ENST00000536255 HIST1H2BAQ96A08 127 aa9.77□□□□□ -0.85
RPAIN-205ENST00000536255 FAM19A4Q96LR4 140 aa9.77□□□□□ -0.85
RPAIN-205ENST00000536255 ATG101Q9BSB4 218 aa9.77□□□□□ -0.85
RPAIN-205ENST00000536255 YTHDF2Q9Y5A9 579 aaKnown RBP9.77□□□□□ -0.85
RPAIN-205ENST00000536255 RYR2Q92736 4967 aa9.76□□□□□ -0.85
RPAIN-205ENST00000536255 A0A1B0GV50 99 aa9.76□□□□□ -0.85
RPAIN-205ENST00000536255 C7orf71A4D174 169 aa9.76□□□□□ -0.85
RPAIN-205ENST00000536255 F6UZH7 168 aa9.76□□□□□ -0.85
RPAIN-205ENST00000536255 DEFB4AO15263 64 aa9.76□□□□□ -0.85
RPAIN-205ENST00000536255 TAS2R60P59551 318 aa9.76□□□□□ -0.85
RPAIN-205ENST00000536255 Q8TAT8 98 aa9.76□□□□□ -0.85
RPAIN-205ENST00000536255 NDFIP1Q9BT67 221 aa9.76□□□□□ -0.85
RPAIN-205ENST00000536255 TENM2Q9NT68 2774 aa9.76□□□□□ -0.85
RPAIN-205ENST00000536255 SACSQ9NZJ4 4579 aa9.75□□□□□ -0.85
RPAIN-205ENST00000536255 TRAV12-3A0A0B4J271 114 aa9.75□□□□□ -0.85
RPAIN-205ENST00000536255 NUPR2A6NF83 97 aa9.75□□□□□ -0.85
RPAIN-205ENST00000536255 RNASE4P34096 147 aaKnown RBP9.75□□□□□ -0.85
RPAIN-205ENST00000536255 KIR3DS1Q14943 382 aa9.75□□□□□ -0.85
RPAIN-205ENST00000536255 ALKAL2Q6UX46 152 aa9.75□□□□□ -0.85
RPAIN-205ENST00000536255 TMEM75Q8N9X5 138 aa9.75□□□□□ -0.85
RPAIN-205ENST00000536255 MANBALQ9NQG1 85 aa9.75□□□□□ -0.85
RPAIN-205ENST00000536255 LCE6AA0A183 80 aa9.74□□□□□ -0.85
RPAIN-205ENST00000536255 TEX48A0A1B0GUV7 120 aa9.74□□□□□ -0.85
RPAIN-205ENST00000536255 LOC102723971A0A1B0GUV8 181 aa9.74□□□□□ -0.85
RPAIN-205ENST00000536255 PEX7O00628 323 aa9.74□□□□□ -0.85
RPAIN-205ENST00000536255 PAGE4O60829 102 aa9.74□□□□□ -0.85
RPAIN-205ENST00000536255 RBMY1A1P0DJD3 496 aaKnown RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms