RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 PTHLHP12272 177 aa2.3□□□□□ -2.04
YBX3-205ENST00000536107 GADD45AP24522 165 aa2.3□□□□□ -2.04
YBX3-205ENST00000536107 FCGR2CP31995 323 aa2.3□□□□□ -2.04
YBX3-205ENST00000536107 LEPP41159 167 aa2.3□□□□□ -2.04
YBX3-205ENST00000536107 RPL5P46777 297 aaKnown RBP2.3□□□□□ -2.04
YBX3-205ENST00000536107 CAMPP49913 170 aa2.3□□□□□ -2.04
YBX3-205ENST00000536107 SEC61BP60468 96 aaKnown RBP2.3□□□□□ -2.04
YBX3-205ENST00000536107 POLR2GP62487 172 aaKnown RBP eCLIP2.3□□□□□ -2.04
YBX3-205ENST00000536107 QRFPP83859 136 aa2.3□□□□□ -2.04
YBX3-205ENST00000536107 COX6A2Q02221 97 aa2.3□□□□□ -2.04
YBX3-205ENST00000536107 Q0VG73 95 aa2.3□□□□□ -2.04
YBX3-205ENST00000536107 C1orf100Q5SVJ3 147 aa2.3□□□□□ -2.04
YBX3-205ENST00000536107 TMPRSS11AQ6ZMR5 421 aa2.3□□□□□ -2.04
YBX3-205ENST00000536107 ARRDC1Q8N5I2 433 aa2.3□□□□□ -2.04
YBX3-205ENST00000536107 TMEM170AQ8WVE7 144 aa2.3□□□□□ -2.04
YBX3-205ENST00000536107 FCAMRQ8WWV6 532 aa2.3□□□□□ -2.04
YBX3-205ENST00000536107 RPUSD4Q96CM3 377 aaKnown RBP2.3□□□□□ -2.04
YBX3-205ENST00000536107 C9orf85Q96MD7 179 aa2.3□□□□□ -2.04
YBX3-205ENST00000536107 PRADC1Q9BSG0 188 aa2.3□□□□□ -2.04
YBX3-205ENST00000536107 KRTAP4-1Q9BYQ7 146 aa2.3□□□□□ -2.04
YBX3-205ENST00000536107 TMEM222Q9H0R3 208 aa2.3□□□□□ -2.04
YBX3-205ENST00000536107 Q9UF83 564 aa2.3□□□□□ -2.04
YBX3-205ENST00000536107 SSR3Q9UNL2 185 aa2.3□□□□□ -2.04
YBX3-205ENST00000536107 TRAV34A0A0B4J273 112 aa2.29□□□□□ -2.04
YBX3-205ENST00000536107 SNRPGP15A8MWD9 76 aa2.29□□□□□ -2.04
YBX3-205ENST00000536107 KRTAP4-16G5E9R7 235 aaPredicted RBP2.29□□□□□ -2.04
YBX3-205ENST00000536107 SLC17A2O00624 439 aa2.29□□□□□ -2.04
YBX3-205ENST00000536107 FABP1P07148 127 aa2.29□□□□□ -2.04
YBX3-205ENST00000536107 RNASE2P10153 161 aaKnown RBP2.29□□□□□ -2.04
YBX3-205ENST00000536107 F2RP25116 425 aa2.29□□□□□ -2.04
YBX3-205ENST00000536107 MAPK3P27361 379 aaPredicted RBP2.29□□□□□ -2.04
YBX3-205ENST00000536107 RAB31Q13636 194 aa2.29□□□□□ -2.04
YBX3-205ENST00000536107 MSMO1Q15800 293 aa2.29□□□□□ -2.04
YBX3-205ENST00000536107 ASB16-AS1Q495Z4 193 aa2.29□□□□□ -2.04
YBX3-205ENST00000536107 HSD17B12Q53GQ0 312 aa2.29□□□□□ -2.04
YBX3-205ENST00000536107 C1orf137Q5JT78 98 aa2.29□□□□□ -2.04
YBX3-205ENST00000536107 ETFRF1Q6IPR1 90 aa2.29□□□□□ -2.04
YBX3-205ENST00000536107 CNIH2Q6PI25 160 aa2.29□□□□□ -2.04
YBX3-205ENST00000536107 ZNF818PQ6ZRF7 136 aa2.29□□□□□ -2.04
YBX3-205ENST00000536107 TMEM17Q86X19 198 aa2.29□□□□□ -2.04
YBX3-205ENST00000536107 NIT1Q86X76 327 aa2.29□□□□□ -2.04
YBX3-205ENST00000536107 BPIFCQ8NFQ6 507 aa2.29□□□□□ -2.04
YBX3-205ENST00000536107 OR10P1Q8NGE3 313 aa2.29□□□□□ -2.04
YBX3-205ENST00000536107 OR4D10Q8NGI6 311 aa2.29□□□□□ -2.04
YBX3-205ENST00000536107 OR10G4Q8NGN3 311 aa2.29□□□□□ -2.04
YBX3-205ENST00000536107 ZNF431Q8TF32 576 aaPredicted RBP2.29□□□□□ -2.04
YBX3-205ENST00000536107 RRNAD1Q96FB5 475 aaKnown RBP2.29□□□□□ -2.04
YBX3-205ENST00000536107 NAA50Q9GZZ1 169 aaKnown RBP2.29□□□□□ -2.04
YBX3-205ENST00000536107 AMBNQ9NP70 447 aa2.29□□□□□ -2.04
YBX3-205ENST00000536107 TMEM262E9PQX1 116 aa2.28□□□□□ -2.04
YBX3-205ENST00000536107 MPDU1O75352 247 aa2.28□□□□□ -2.04
YBX3-205ENST00000536107 TNFAIP8O95379 198 aa2.28□□□□□ -2.04
YBX3-205ENST00000536107 PPYP01298 95 aa2.28□□□□□ -2.04
YBX3-205ENST00000536107 DTYMKP23919 212 aa2.28□□□□□ -2.04
YBX3-205ENST00000536107 PSMA1P25786 263 aaKnown RBP2.28□□□□□ -2.04
YBX3-205ENST00000536107 HLA-DMAP28067 261 aa2.28□□□□□ -2.04
YBX3-205ENST00000536107 RNASE4P34096 147 aaKnown RBP2.28□□□□□ -2.04
YBX3-205ENST00000536107 POLR2IP36954 125 aaKnown RBP2.28□□□□□ -2.04
YBX3-205ENST00000536107 HTR2BP41595 481 aa2.28□□□□□ -2.04
YBX3-205ENST00000536107 ZNF138P52744 262 aa2.28□□□□□ -2.04
YBX3-205ENST00000536107 WNT4P56705 351 aa2.28□□□□□ -2.04
YBX3-205ENST00000536107 HERV-K104P61576 105 aa2.28□□□□□ -2.04
YBX3-205ENST00000536107 RPS11P62280 158 aaKnown RBP eCLIP2.28□□□□□ -2.04
YBX3-205ENST00000536107 ZNF90Q03938 601 aa2.28□□□□□ -2.04
YBX3-205ENST00000536107 GUK1Q16774 197 aa2.28□□□□□ -2.04
YBX3-205ENST00000536107 Q6ZS49 121 aa2.28□□□□□ -2.04
YBX3-205ENST00000536107 DEFB107AQ8IZN7 70 aa2.28□□□□□ -2.04
YBX3-205ENST00000536107 CCDC197Q8NCU1 140 aa2.28□□□□□ -2.04
YBX3-205ENST00000536107 OR52I1Q8NGK6 324 aa2.28□□□□□ -2.04
YBX3-205ENST00000536107 OR10G9Q8NGN4 311 aa2.28□□□□□ -2.04
YBX3-205ENST00000536107 OR10R2Q8NGX6 335 aa2.28□□□□□ -2.04
YBX3-205ENST00000536107 ANP32BQ92688 251 aaKnown RBP2.28□□□□□ -2.04
YBX3-205ENST00000536107 CENPNQ96H22 339 aaPredicted RBP2.28□□□□□ -2.04
YBX3-205ENST00000536107 LINC00477Q96M19 166 aa2.28□□□□□ -2.04
YBX3-205ENST00000536107 CIB1Q99828 191 aa2.28□□□□□ -2.04
YBX3-205ENST00000536107 TMBIM4Q9HC24 238 aa2.28□□□□□ -2.04
YBX3-205ENST00000536107 FGF20Q9NP95 211 aaPredicted RBP2.28□□□□□ -2.04
YBX3-205ENST00000536107 RRP15Q9Y3B9 282 aaKnown RBP2.28□□□□□ -2.04
YBX3-205ENST00000536107 KMT2DO14686 5537 aa2.28□□□□□ -2.05
YBX3-205ENST00000536107 A0A087WWC5 75 aa2.27□□□□□ -2.05
YBX3-205ENST00000536107 IGHV3-73A0A0B4J1V6 119 aa2.27□□□□□ -2.05
YBX3-205ENST00000536107 TRAV4A0A0B4J268 109 aa2.27□□□□□ -2.05
YBX3-205ENST00000536107 C7orf71A4D174 169 aa2.27□□□□□ -2.05
YBX3-205ENST00000536107 G3V2T6 193 aa2.27□□□□□ -2.05
YBX3-205ENST00000536107 GABARAPH6UMI1 98 aa2.27□□□□□ -2.05
YBX3-205ENST00000536107 NDUFS6O75380 124 aaKnown RBP2.27□□□□□ -2.05
YBX3-205ENST00000536107 PGLYRP1O75594 196 aaPredicted RBP2.27□□□□□ -2.05
YBX3-205ENST00000536107 B3GALNT1O75752 331 aa2.27□□□□□ -2.05
YBX3-205ENST00000536107 GABARAPO95166 117 aa2.27□□□□□ -2.05
YBX3-205ENST00000536107 SLC25A5P05141 298 aaKnown RBP2.27□□□□□ -2.05
YBX3-205ENST00000536107 HIST1H1DP16402 221 aaKnown RBP2.27□□□□□ -2.05
YBX3-205ENST00000536107 ORM2P19652 201 aa2.27□□□□□ -2.05
YBX3-205ENST00000536107 CXCL3P19876 107 aa2.27□□□□□ -2.05
YBX3-205ENST00000536107 S100A7P31151 101 aa2.27□□□□□ -2.05
YBX3-205ENST00000536107 TSPAN5P62079 268 aa2.27□□□□□ -2.05
YBX3-205ENST00000536107 BTN1A1Q13410 526 aa2.27□□□□□ -2.05
YBX3-205ENST00000536107 RHOHQ15669 191 aa2.27□□□□□ -2.05
YBX3-205ENST00000536107 TRIM16LQ309B1 348 aa2.27□□□□□ -2.05
YBX3-205ENST00000536107 ATRAIDQ6UW56 229 aa2.27□□□□□ -2.05
YBX3-205ENST00000536107 LINC00173Q6ZV60 143 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms