RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 C1QBP02746 253 aa16.31■□□□□ 0.2
SFSWAP-204ENST00000535399 PRM2P04554 102 aa16.31■□□□□ 0.2
SFSWAP-204ENST00000535399 RRN3P1Q2M238 152 aa16.31■□□□□ 0.2
SFSWAP-204ENST00000535399 TMEM256Q8N2U0 113 aa16.31■□□□□ 0.2
SFSWAP-204ENST00000535399 PLA2G2EQ9NZK7 142 aa16.31■□□□□ 0.2
SFSWAP-204ENST00000535399 LOC102723971A0A1B0GUV8 181 aa16.3■□□□□ 0.2
SFSWAP-204ENST00000535399 DIRC3C9JPN6 131 aa16.3■□□□□ 0.2
SFSWAP-204ENST00000535399 LGALSLQ3ZCW2 172 aaPredicted RBP16.3■□□□□ 0.2
SFSWAP-204ENST00000535399 AKAP14Q86UN6 197 aa16.3■□□□□ 0.2
SFSWAP-204ENST00000535399 RXFP4Q8TDU9 374 aa16.3■□□□□ 0.2
SFSWAP-204ENST00000535399 HYLS1Q96M11 299 aa16.3■□□□□ 0.2
SFSWAP-204ENST00000535399 C20orf144Q9BQM9 153 aa16.3■□□□□ 0.2
SFSWAP-204ENST00000535399 RBAKDNA6NC62 111 aa16.29■□□□□ 0.2
SFSWAP-204ENST00000535399 J3KRW8 73 aa16.29■□□□□ 0.2
SFSWAP-204ENST00000535399 SEC11BP0C7V7 166 aa16.29■□□□□ 0.2
SFSWAP-204ENST00000535399 EMP1P54849 157 aa16.29■□□□□ 0.2
SFSWAP-204ENST00000535399 TMEM78Q5T7P6 136 aa16.29■□□□□ 0.2
SFSWAP-204ENST00000535399 CEMP1Q6PRD7 247 aaPredicted RBP16.29■□□□□ 0.2
SFSWAP-204ENST00000535399 PHLDA1Q8WV24 401 aaPredicted RBP16.29■□□□□ 0.2
SFSWAP-204ENST00000535399 LINC01587Q99440 93 aa16.29■□□□□ 0.2
SFSWAP-204ENST00000535399 TMEM167BQ9NRX6 74 aa16.29■□□□□ 0.2
SFSWAP-204ENST00000535399 ZNF492Q9P255 531 aa16.29■□□□□ 0.2
SFSWAP-204ENST00000535399 A0A1B0GVG6 124 aa16.28■□□□□ 0.2
SFSWAP-204ENST00000535399 KLLNB2CW77 178 aa16.28■□□□□ 0.2
SFSWAP-204ENST00000535399 PFDN1O60925 122 aa16.28■□□□□ 0.2
SFSWAP-204ENST00000535399 SLC25A5P05141 298 aaKnown RBP16.28■□□□□ 0.2
SFSWAP-204ENST00000535399 CRISP2P16562 243 aa16.28■□□□□ 0.2
SFSWAP-204ENST00000535399 TAS2R60P59551 318 aa16.28■□□□□ 0.2
SFSWAP-204ENST00000535399 FAM74A1Q5RGS3 127 aa16.28■□□□□ 0.2
SFSWAP-204ENST00000535399 ARL6IP6Q8N6S5 226 aa16.28■□□□□ 0.2
SFSWAP-204ENST00000535399 PLECQ15149 4684 aaKnown RBP16.28■□□□□ 0.2
SFSWAP-204ENST00000535399 NUPR2A6NF83 97 aa16.27■□□□□ 0.2
SFSWAP-204ENST00000535399 AZU1P20160 251 aa16.27■□□□□ 0.2
SFSWAP-204ENST00000535399 ZNF138P52744 262 aa16.27■□□□□ 0.2
SFSWAP-204ENST00000535399 EIF5AP63241 154 aaKnown RBP16.27■□□□□ 0.2
SFSWAP-204ENST00000535399 CD300CQ08708 224 aa16.27■□□□□ 0.2
SFSWAP-204ENST00000535399 ZFAND2AQ8N6M9 145 aa16.27■□□□□ 0.2
SFSWAP-204ENST00000535399 Q8TAT8 98 aa16.27■□□□□ 0.2
SFSWAP-204ENST00000535399 CMTM2Q8TAZ6 248 aa16.27■□□□□ 0.2
SFSWAP-204ENST00000535399 TENM2Q9NT68 2774 aa16.27■□□□□ 0.2
SFSWAP-204ENST00000535399 H7BYZ3 331 aa16.26■□□□□ 0.19
SFSWAP-204ENST00000535399 C12orf74Q32Q52 190 aa16.26■□□□□ 0.19
SFSWAP-204ENST00000535399 STOML3Q8TAV4 291 aa16.26■□□□□ 0.19
SFSWAP-204ENST00000535399 YTHDF2Q9Y5A9 579 aaKnown RBP16.26■□□□□ 0.19
SFSWAP-204ENST00000535399 TRAV12-3A0A0B4J271 114 aa16.25■□□□□ 0.19
SFSWAP-204ENST00000535399 TRBV7-9A0A0J9YWB2 115 aa16.25■□□□□ 0.19
SFSWAP-204ENST00000535399 C7orf71A4D174 169 aa16.25■□□□□ 0.19
SFSWAP-204ENST00000535399 NMBP08949 121 aa16.25■□□□□ 0.19
SFSWAP-204ENST00000535399 SPART-AS1P0CW21 52 aa16.25■□□□□ 0.19
SFSWAP-204ENST00000535399 FHITP49789 147 aa16.25■□□□□ 0.19
SFSWAP-204ENST00000535399 FGF8P55075 233 aaPredicted RBP16.25■□□□□ 0.19
SFSWAP-204ENST00000535399 GNG5P63218 68 aa16.25■□□□□ 0.19
SFSWAP-204ENST00000535399 IQCF2Q8IXL9 164 aa16.25■□□□□ 0.19
SFSWAP-204ENST00000535399 TMPRSS5Q9H3S3 457 aa16.25■□□□□ 0.19
SFSWAP-204ENST00000535399 DKK2Q9UBU2 259 aa16.25■□□□□ 0.19
SFSWAP-204ENST00000535399 RPH3ALQ9UNE2 315 aa16.25■□□□□ 0.19
SFSWAP-204ENST00000535399 PLAC8L1A1L4L8 177 aa16.24■□□□□ 0.19
SFSWAP-204ENST00000535399 MAP1LC3B2A6NCE7 125 aa16.24■□□□□ 0.19
SFSWAP-204ENST00000535399 GGTLC3B5MD39 225 aa16.24■□□□□ 0.19
SFSWAP-204ENST00000535399 UMAD1C9J7I0 102 aa16.24■□□□□ 0.19
SFSWAP-204ENST00000535399 TPT1P13693 172 aaKnown RBP16.24■□□□□ 0.19
SFSWAP-204ENST00000535399 BTN1A1Q13410 526 aa16.24■□□□□ 0.19
SFSWAP-204ENST00000535399 PRR9Q5T870 116 aa16.24■□□□□ 0.19
SFSWAP-204ENST00000535399 FAM222AQ5U5X8 452 aa16.24■□□□□ 0.19
SFSWAP-204ENST00000535399 Q6ZTC4 211 aa16.24■□□□□ 0.19
SFSWAP-204ENST00000535399 GOLT1AQ6ZVE7 132 aa16.24■□□□□ 0.19
SFSWAP-204ENST00000535399 ZNF767PQ75MW2 155 aa16.24■□□□□ 0.19
SFSWAP-204ENST00000535399 MAP1LC3BQ9GZQ8 125 aa16.24■□□□□ 0.19
SFSWAP-204ENST00000535399 ZNF324O75467 553 aaPredicted RBP16.23■□□□□ 0.19
SFSWAP-204ENST00000535399 C5orf17Q8NAS9 161 aa16.23■□□□□ 0.19
SFSWAP-204ENST00000535399 TMED6Q8WW62 240 aa16.23■□□□□ 0.19
SFSWAP-204ENST00000535399 NIPSNAP3BQ9BS92 247 aa16.23■□□□□ 0.19
SFSWAP-204ENST00000535399 A0A1W2PRE2 83 aa16.22■□□□□ 0.19
SFSWAP-204ENST00000535399 HTN1P15515 57 aa16.22■□□□□ 0.19
SFSWAP-204ENST00000535399 RNASE4P34096 147 aaKnown RBP16.22■□□□□ 0.19
SFSWAP-204ENST00000535399 SUMO1P63165 101 aaKnown RBP16.22■□□□□ 0.19
SFSWAP-204ENST00000535399 KLK5Q9Y337 293 aaPredicted RBP16.22■□□□□ 0.19
SFSWAP-204ENST00000535399 SACSQ9NZJ4 4579 aa16.22■□□□□ 0.19
SFSWAP-204ENST00000535399 TEX48A0A1B0GUV7 120 aa16.21■□□□□ 0.19
SFSWAP-204ENST00000535399 GPX1P07203 203 aa16.21■□□□□ 0.19
SFSWAP-204ENST00000535399 FAM213BQ8TBF2 198 aa16.21■□□□□ 0.19
SFSWAP-204ENST00000535399 RNASE8Q8TDE3 154 aaKnown RBP16.21■□□□□ 0.19
SFSWAP-204ENST00000535399 LENEPQ9Y5L5 61 aa16.21■□□□□ 0.19
SFSWAP-204ENST00000535399 C11orf94C9JXX5 98 aa16.2■□□□□ 0.18
SFSWAP-204ENST00000535399 TCRAP04437 139 aa16.2■□□□□ 0.18
SFSWAP-204ENST00000535399 ZNF493Q6ZR52 646 aa16.2■□□□□ 0.18
SFSWAP-204ENST00000535399 MBD3L1Q8WWY6 194 aa16.2■□□□□ 0.18
SFSWAP-204ENST00000535399 C16orf74Q96GX8 76 aa16.2■□□□□ 0.18
SFSWAP-204ENST00000535399 PYGO2Q9BRQ0 406 aa16.2■□□□□ 0.18
SFSWAP-204ENST00000535399 EPDR1Q9UM22 224 aa16.2■□□□□ 0.18
SFSWAP-204ENST00000535399 TRAV8-1A0A0A6YYK1 113 aa16.19■□□□□ 0.18
SFSWAP-204ENST00000535399 SERTM2A0A1B0GWG4 89 aa16.19■□□□□ 0.18
SFSWAP-204ENST00000535399 UBE2G2P60604 165 aa16.19■□□□□ 0.18
SFSWAP-204ENST00000535399 DPPA3Q6W0C5 159 aa16.19■□□□□ 0.18
SFSWAP-204ENST00000535399 Q6ZQT7 251 aa16.19■□□□□ 0.18
SFSWAP-204ENST00000535399 C9orf62Q8N4C0 152 aa16.19■□□□□ 0.18
SFSWAP-204ENST00000535399 TMEM263Q8WUH6 116 aaKnown RBP16.19■□□□□ 0.18
SFSWAP-204ENST00000535399 LYSTQ99698 3801 aa16.18■□□□□ 0.18
SFSWAP-204ENST00000535399 TRAV10A0A0B4J240 114 aa16.18■□□□□ 0.18
SFSWAP-204ENST00000535399 FAM74A7A6NL05 159 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms