RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 FAM19A4Q96LR4 140 aa9.38□□□□□ -0.91
CAPN1-228ENST00000534373 SLC25A2Q9BXI2 301 aa9.38□□□□□ -0.91
CAPN1-228ENST00000534373 MRPL32Q9BYC8 188 aaKnown RBP9.38□□□□□ -0.91
CAPN1-228ENST00000534373 AGPAT4-IT1Q9H0P7 198 aa9.38□□□□□ -0.91
CAPN1-228ENST00000534373 OR51M1Q9H341 326 aa9.38□□□□□ -0.91
CAPN1-228ENST00000534373 C7orf71A4D174 169 aa9.37□□□□□ -0.91
CAPN1-228ENST00000534373 ZNF324O75467 553 aaPredicted RBP9.37□□□□□ -0.91
CAPN1-228ENST00000534373 PET100P0DJ07 73 aa9.37□□□□□ -0.91
CAPN1-228ENST00000534373 CRISP2P16562 243 aa9.37□□□□□ -0.91
CAPN1-228ENST00000534373 M6PRP20645 277 aa9.37□□□□□ -0.91
CAPN1-228ENST00000534373 H2BFSP57053 126 aa9.37□□□□□ -0.91
CAPN1-228ENST00000534373 CLINT1Q14677 625 aa9.37□□□□□ -0.91
CAPN1-228ENST00000534373 ANXA2RQ3ZCQ2 193 aa9.37□□□□□ -0.91
CAPN1-228ENST00000534373 ZNF680Q8NEM1 530 aa9.37□□□□□ -0.91
CAPN1-228ENST00000534373 BLNKQ8WV28 456 aa9.37□□□□□ -0.91
CAPN1-228ENST00000534373 PPP1R1CQ8WVI7 109 aa9.37□□□□□ -0.91
CAPN1-228ENST00000534373 NACAE9PAV3 2078 aa9.36□□□□□ -0.91
CAPN1-228ENST00000534373 TRBV7-9A0A0J9YWB2 115 aa9.36□□□□□ -0.91
CAPN1-228ENST00000534373 J3KRW8 73 aa9.36□□□□□ -0.91
CAPN1-228ENST00000534373 ERCC8Q13216 396 aa9.36□□□□□ -0.91
CAPN1-228ENST00000534373 ICAM4Q14773 271 aa9.36□□□□□ -0.91
CAPN1-228ENST00000534373 TMEM78Q5T7P6 136 aa9.36□□□□□ -0.91
CAPN1-228ENST00000534373 MIR17HGQ75NE6 70 aa9.36□□□□□ -0.91
CAPN1-228ENST00000534373 LYPD1Q8N2G4 141 aa9.36□□□□□ -0.91
CAPN1-228ENST00000534373 EXOC3-AS1Q8N2X6 119 aa9.36□□□□□ -0.91
CAPN1-228ENST00000534373 ZNRF2Q8NHG8 242 aa9.36□□□□□ -0.91
CAPN1-228ENST00000534373 RXFP4Q8TDU9 374 aa9.36□□□□□ -0.91
CAPN1-228ENST00000534373 RNF141Q8WVD5 230 aa9.36□□□□□ -0.91
CAPN1-228ENST00000534373 GNPNAT1Q96EK6 184 aaPredicted RBP9.36□□□□□ -0.91
CAPN1-228ENST00000534373 C18orf15Q96N68 181 aa9.36□□□□□ -0.91
CAPN1-228ENST00000534373 ATP5SQ99766 215 aa9.36□□□□□ -0.91
CAPN1-228ENST00000534373 PAXXQ9BUH6 204 aa9.36□□□□□ -0.91
CAPN1-228ENST00000534373 FUT9Q9Y231 359 aa9.36□□□□□ -0.91
CAPN1-228ENST00000534373 KIAA1109Q2LD37 5005 aa9.35□□□□□ -0.91
CAPN1-228ENST00000534373 GAGE12BA1L429 117 aa9.35□□□□□ -0.91
CAPN1-228ENST00000534373 GAGE7O76087 117 aa9.35□□□□□ -0.91
CAPN1-228ENST00000534373 MPC2O95563 127 aa9.35□□□□□ -0.91
CAPN1-228ENST00000534373 GPX1P07203 203 aa9.35□□□□□ -0.91
CAPN1-228ENST00000534373 GAGE12FP0CL80 117 aa9.35□□□□□ -0.91
CAPN1-228ENST00000534373 GAGE12GP0CL81 117 aa9.35□□□□□ -0.91
CAPN1-228ENST00000534373 GAGE12IP0CL82 117 aa9.35□□□□□ -0.91
CAPN1-228ENST00000534373 OR5I1Q13606 314 aa9.35□□□□□ -0.91
CAPN1-228ENST00000534373 EIF4E3Q8N5X7 224 aaKnown RBP9.35□□□□□ -0.91
CAPN1-228ENST00000534373 FXYD5Q96DB9 178 aa9.35□□□□□ -0.91
CAPN1-228ENST00000534373 ZNF492Q9P255 531 aa9.35□□□□□ -0.91
CAPN1-228ENST00000534373 ALG5Q9Y673 324 aa9.35□□□□□ -0.91
CAPN1-228ENST00000534373 TRAV26-1A0A087WT03 109 aa9.34□□□□□ -0.91
CAPN1-228ENST00000534373 NBDYA0A0U1RRE5 68 aa9.34□□□□□ -0.91
CAPN1-228ENST00000534373 IFNA5P01569 189 aa9.34□□□□□ -0.91
CAPN1-228ENST00000534373 MED14OSP0DP75 135 aa9.34□□□□□ -0.91
CAPN1-228ENST00000534373 RNASE4P34096 147 aaKnown RBP9.34□□□□□ -0.91
CAPN1-228ENST00000534373 C11orf72Q8NBR9 251 aa9.34□□□□□ -0.91
CAPN1-228ENST00000534373 LINC00588Q9Y4M8 146 aa9.34□□□□□ -0.91
CAPN1-228ENST00000534373 HSPB11Q9Y547 144 aa9.34□□□□□ -0.91
CAPN1-228ENST00000534373 PKD1P98161 4303 aa9.33□□□□□ -0.92
CAPN1-228ENST00000534373 RBAKDNA6NC62 111 aa9.33□□□□□ -0.92
CAPN1-228ENST00000534373 HOXA5P20719 270 aa9.33□□□□□ -0.92
CAPN1-228ENST00000534373 RPL12P30050 165 aaKnown RBP9.33□□□□□ -0.92
CAPN1-228ENST00000534373 CSN1S1P47710 185 aa9.33□□□□□ -0.92
CAPN1-228ENST00000534373 CD300CQ08708 224 aa9.33□□□□□ -0.92
CAPN1-228ENST00000534373 IBA57Q5T440 356 aaKnown RBP9.33□□□□□ -0.92
CAPN1-228ENST00000534373 FAM122CQ6P4D5 195 aa9.33□□□□□ -0.92
CAPN1-228ENST00000534373 SSX7Q7RTT5 188 aa9.33□□□□□ -0.92
CAPN1-228ENST00000534373 ZFAND2AQ8N6M9 145 aa9.33□□□□□ -0.92
CAPN1-228ENST00000534373 SCGB1C1Q8TD33 95 aa9.33□□□□□ -0.92
CAPN1-228ENST00000534373 GSN-AS1Q9NRJ2 163 aa9.33□□□□□ -0.92
CAPN1-228ENST00000534373 PKHD1P08F94 4074 aa9.33□□□□□ -0.92
CAPN1-228ENST00000534373 IGKV2-40A0A087WW87 121 aaPredicted RBP9.32□□□□□ -0.92
CAPN1-228ENST00000534373 OR7C2O60412 319 aa9.32□□□□□ -0.92
CAPN1-228ENST00000534373 IGKV2D-40P01614 121 aaPredicted RBP9.32□□□□□ -0.92
CAPN1-228ENST00000534373 OR10J4P0C629 311 aa9.32□□□□□ -0.92
CAPN1-228ENST00000534373 ZNF138P52744 262 aa9.32□□□□□ -0.92
CAPN1-228ENST00000534373 TAS2R45P59539 299 aa9.32□□□□□ -0.92
CAPN1-228ENST00000534373 BTN1A1Q13410 526 aa9.32□□□□□ -0.92
CAPN1-228ENST00000534373 RGS21Q2M5E4 152 aa9.32□□□□□ -0.92
CAPN1-228ENST00000534373 Q6ZTI0 123 aa9.32□□□□□ -0.92
CAPN1-228ENST00000534373 VGLL1Q99990 258 aa9.32□□□□□ -0.92
CAPN1-228ENST00000534373 Q9H8V8 135 aa9.32□□□□□ -0.92
CAPN1-228ENST00000534373 LENEPQ9Y5L5 61 aa9.32□□□□□ -0.92
CAPN1-228ENST00000534373 DNAH11Q96DT5 4516 aa9.32□□□□□ -0.92
CAPN1-228ENST00000534373 TRGV2A0A075B6R0 118 aa9.31□□□□□ -0.92
CAPN1-228ENST00000534373 RGS13O14921 159 aa9.31□□□□□ -0.92
CAPN1-228ENST00000534373 SPINK4O60575 86 aa9.31□□□□□ -0.92
CAPN1-228ENST00000534373 TCL1AP56279 114 aa9.31□□□□□ -0.92
CAPN1-228ENST00000534373 RANP62826 216 aaKnown RBP9.31□□□□□ -0.92
CAPN1-228ENST00000534373 KHDC3LQ587J8 217 aa9.31□□□□□ -0.92
CAPN1-228ENST00000534373 FFAR4Q5NUL3 377 aa9.31□□□□□ -0.92
CAPN1-228ENST00000534373 C6orf223Q8N319 242 aa9.31□□□□□ -0.92
CAPN1-228ENST00000534373 ARL6IP6Q8N6S5 226 aa9.31□□□□□ -0.92
CAPN1-228ENST00000534373 UPK3BQ9BT76 320 aa9.31□□□□□ -0.92
CAPN1-228ENST00000534373 IGHV1OR15-1A0A075B7D0 117 aa9.3□□□□□ -0.92
CAPN1-228ENST00000534373 TRGV1A0A0A0MS02 117 aa9.3□□□□□ -0.92
CAPN1-228ENST00000534373 A0A0J9YY99 117 aa9.3□□□□□ -0.92
CAPN1-228ENST00000534373 BTF3P20290 206 aaKnown RBP9.3□□□□□ -0.92
CAPN1-228ENST00000534373 SLAQ13239 276 aa9.3□□□□□ -0.92
CAPN1-228ENST00000534373 PHYHIPLQ96FC7 376 aa9.3□□□□□ -0.92
CAPN1-228ENST00000534373 MED28Q9H204 178 aa9.3□□□□□ -0.92
CAPN1-228ENST00000534373 Q9H3A6 140 aa9.3□□□□□ -0.92
CAPN1-228ENST00000534373 TMPRSS5Q9H3S3 457 aa9.3□□□□□ -0.92
CAPN1-228ENST00000534373 DYNC1H1Q14204 4646 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms