RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 SLC22A24Q8N4F4 322 aa3.24□□□□□ -1.89
ITGB1-219ENST00000534049 MDS2Q8NDY4 140 aa3.24□□□□□ -1.89
ITGB1-219ENST00000534049 OR52N5Q8NH56 324 aa3.24□□□□□ -1.89
ITGB1-219ENST00000534049 FAM57AQ8TBR7 257 aa3.24□□□□□ -1.89
ITGB1-219ENST00000534049 UBE2E3Q969T4 207 aa3.24□□□□□ -1.89
ITGB1-219ENST00000534049 C11orf52Q96A22 123 aa3.24□□□□□ -1.89
ITGB1-219ENST00000534049 CARD19Q96LW7 228 aa3.24□□□□□ -1.89
ITGB1-219ENST00000534049 ZNF442Q9H7R0 627 aa3.24□□□□□ -1.89
ITGB1-219ENST00000534049 RETNQ9HD89 108 aa3.24□□□□□ -1.89
ITGB1-219ENST00000534049 HILPDAQ9Y5L2 63 aa3.24□□□□□ -1.89
ITGB1-219ENST00000534049 MYO18AQ92614 2054 aaKnown RBP3.24□□□□□ -1.89
ITGB1-219ENST00000534049 PCDH15Q96QU1 1955 aa3.23□□□□□ -1.89
ITGB1-219ENST00000534049 FAM236AA0A1B0GUQ0 79 aa3.23□□□□□ -1.89
ITGB1-219ENST00000534049 FAM236BA0A1B0GV22 79 aa3.23□□□□□ -1.89
ITGB1-219ENST00000534049 TCRBV4S1A1TA0A5B7 111 aa3.23□□□□□ -1.89
ITGB1-219ENST00000534049 TMEM14DPA8MWL7 114 aa3.23□□□□□ -1.89
ITGB1-219ENST00000534049 EPM2AB3EWF7 344 aa3.23□□□□□ -1.89
ITGB1-219ENST00000534049 LY6LH3BQJ8 138 aa3.23□□□□□ -1.89
ITGB1-219ENST00000534049 NDUFB2O95178 105 aa3.23□□□□□ -1.89
ITGB1-219ENST00000534049 NPYP01303 97 aa3.23□□□□□ -1.89
ITGB1-219ENST00000534049 IGKCP01834 107 aa3.23□□□□□ -1.89
ITGB1-219ENST00000534049 IGHG2P01859 326 aa3.23□□□□□ -1.89
ITGB1-219ENST00000534049 GYPBP06028 91 aa3.23□□□□□ -1.89
ITGB1-219ENST00000534049 COX6A1P12074 109 aa3.23□□□□□ -1.89
ITGB1-219ENST00000534049 LMO2P25791 158 aa3.23□□□□□ -1.89
ITGB1-219ENST00000534049 UBE2L3P68036 154 aaKnown RBP3.23□□□□□ -1.89
ITGB1-219ENST00000534049 SRYQ05066 204 aa3.23□□□□□ -1.89
ITGB1-219ENST00000534049 FAM201AQ5SY85 155 aa3.23□□□□□ -1.89
ITGB1-219ENST00000534049 FAM120AOSQ5T036 256 aa3.23□□□□□ -1.89
ITGB1-219ENST00000534049 C1orf140Q5VVS0 124 aa3.23□□□□□ -1.89
ITGB1-219ENST00000534049 HMGN2P46Q86SG4 172 aa3.23□□□□□ -1.89
ITGB1-219ENST00000534049 LYPD6Q86Y78 171 aa3.23□□□□□ -1.89
ITGB1-219ENST00000534049 DRAM1Q8N682 238 aa3.23□□□□□ -1.89
ITGB1-219ENST00000534049 GVQW1Q8N7I0 195 aa3.23□□□□□ -1.89
ITGB1-219ENST00000534049 WDR31Q8NA23 367 aa3.23□□□□□ -1.89
ITGB1-219ENST00000534049 ZC2HC1AQ96GY0 325 aa3.23□□□□□ -1.89
ITGB1-219ENST00000534049 C4orf45Q96LM5 186 aa3.23□□□□□ -1.89
ITGB1-219ENST00000534049 SPENQ96T58 3664 aaKnown RBP3.23□□□□□ -1.89
ITGB1-219ENST00000534049 HDHD3Q9BSH5 251 aaPredicted RBP3.23□□□□□ -1.89
ITGB1-219ENST00000534049 NHP2Q9NX24 153 aaKnown RBP3.23□□□□□ -1.89
ITGB1-219ENST00000534049 CCDC88CQ9P219 2028 aa3.23□□□□□ -1.89
ITGB1-219ENST00000534049 SERP1Q9Y6X1 66 aa3.23□□□□□ -1.89
ITGB1-219ENST00000534049 V9GYV3 84 aa3.23□□□□□ -1.89
ITGB1-219ENST00000534049 EML5Q05BV3 1969 aa3.23□□□□□ -1.89
ITGB1-219ENST00000534049 TNRC6AQ8NDV7 1962 aaKnown RBP3.23□□□□□ -1.89
ITGB1-219ENST00000534049 CACNA1GO43497 2377 aa3.23□□□□□ -1.89
ITGB1-219ENST00000534049 BSNQ9UPA5 3926 aa3.23□□□□□ -1.89
ITGB1-219ENST00000534049 ANKRD36A6QL64 1941 aa3.23□□□□□ -1.89
ITGB1-219ENST00000534049 GREB1Q4ZG55 1949 aa3.23□□□□□ -1.89
ITGB1-219ENST00000534049 DSPP15924 2871 aaKnown RBP3.22□□□□□ -1.89
ITGB1-219ENST00000534049 TNRC6BQ9UPQ9 1833 aaKnown RBP3.22□□□□□ -1.89
ITGB1-219ENST00000534049 MYMXA0A1B0GTQ4 84 aa3.22□□□□□ -1.89
ITGB1-219ENST00000534049 RBAKDNA6NC62 111 aa3.22□□□□□ -1.89
ITGB1-219ENST00000534049 CPSF4LA6NMK7 179 aaKnown RBP3.22□□□□□ -1.89
ITGB1-219ENST00000534049 LMO7DNF2Z398 122 aa3.22□□□□□ -1.89
ITGB1-219ENST00000534049 H3BTX0 84 aa3.22□□□□□ -1.89
ITGB1-219ENST00000534049 K7EQS6 105 aa3.22□□□□□ -1.89
ITGB1-219ENST00000534049 CXCL13O43927 109 aa3.22□□□□□ -1.89
ITGB1-219ENST00000534049 CD7P09564 240 aa3.22□□□□□ -1.89
ITGB1-219ENST00000534049 CTLA4P16410 223 aa3.22□□□□□ -1.89
ITGB1-219ENST00000534049 COL8A2P25067 703 aa3.22□□□□□ -1.89
ITGB1-219ENST00000534049 GCHFRP30047 84 aa3.22□□□□□ -1.89
ITGB1-219ENST00000534049 DSCR4P56555 118 aaPredicted RBP3.22□□□□□ -1.89
ITGB1-219ENST00000534049 CLDN17P56750 224 aa3.22□□□□□ -1.89
ITGB1-219ENST00000534049 CCL8P80075 99 aa3.22□□□□□ -1.89
ITGB1-219ENST00000534049 QRFPP83859 136 aa3.22□□□□□ -1.89
ITGB1-219ENST00000534049 ARFRP1Q13795 201 aa3.22□□□□□ -1.89
ITGB1-219ENST00000534049 OR1C1Q15619 314 aa3.22□□□□□ -1.89
ITGB1-219ENST00000534049 FAM219BQ5XKK7 198 aa3.22□□□□□ -1.89
ITGB1-219ENST00000534049 C22orf39Q6P5X5 142 aa3.22□□□□□ -1.89
ITGB1-219ENST00000534049 DGAT2L6Q6ZPD8 337 aa3.22□□□□□ -1.89
ITGB1-219ENST00000534049 LYZL2Q7Z4W2 148 aa3.22□□□□□ -1.89
ITGB1-219ENST00000534049 MRPL55Q7Z7F7 128 aaKnown RBP3.22□□□□□ -1.89
ITGB1-219ENST00000534049 EXOC3-AS1Q8N2X6 119 aa3.22□□□□□ -1.89
ITGB1-219ENST00000534049 RPP25LQ8N5L8 163 aaKnown RBP3.22□□□□□ -1.89
ITGB1-219ENST00000534049 ZNF525Q8N782 197 aa3.22□□□□□ -1.89
ITGB1-219ENST00000534049 Q96M85 177 aa3.22□□□□□ -1.89
ITGB1-219ENST00000534049 CHCHD5Q9BSY4 110 aa3.22□□□□□ -1.89
ITGB1-219ENST00000534049 SHANK2-AS3Q9BTD1 123 aa3.22□□□□□ -1.89
ITGB1-219ENST00000534049 CHAC1Q9BUX1 264 aa3.22□□□□□ -1.89
ITGB1-219ENST00000534049 RTL8AQ9BWD3 113 aa3.22□□□□□ -1.89
ITGB1-219ENST00000534049 PILRAQ9UKJ1 303 aa3.22□□□□□ -1.89
ITGB1-219ENST00000534049 DENND4CQ5VZ89 1909 aa3.22□□□□□ -1.89
ITGB1-219ENST00000534049 ATRXP46100 2492 aa3.21□□□□□ -1.89
ITGB1-219ENST00000534049 APC2O95996 2303 aa3.21□□□□□ -1.89
ITGB1-219ENST00000534049 ANAPC1Q9H1A4 1944 aa3.21□□□□□ -1.9
ITGB1-219ENST00000534049 TRAV17A0A0B4J275 112 aa3.21□□□□□ -1.9
ITGB1-219ENST00000534049 A0A0J9YW62 118 aa3.21□□□□□ -1.9
ITGB1-219ENST00000534049 LYZL6O75951 148 aa3.21□□□□□ -1.9
ITGB1-219ENST00000534049 CDK2AP2O75956 126 aa3.21□□□□□ -1.9
ITGB1-219ENST00000534049 MGST1P10620 155 aaKnown RBP3.21□□□□□ -1.9
ITGB1-219ENST00000534049 NPPCP23582 126 aa3.21□□□□□ -1.9
ITGB1-219ENST00000534049 SSR2P43308 183 aa3.21□□□□□ -1.9
ITGB1-219ENST00000534049 EMDP50402 254 aa3.21□□□□□ -1.9
ITGB1-219ENST00000534049 FXYD2P54710 66 aa3.21□□□□□ -1.9
ITGB1-219ENST00000534049 UBE2D3P61077 147 aa3.21□□□□□ -1.9
ITGB1-219ENST00000534049 NPC2P61916 151 aa3.21□□□□□ -1.9
ITGB1-219ENST00000534049 UBE2D2P62837 147 aa3.21□□□□□ -1.9
ITGB1-219ENST00000534049 DEFB121Q5J5C9 76 aa3.21□□□□□ -1.9
ITGB1-219ENST00000534049 LINC00643Q86TS7 51 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms