RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 LINC00158P58513 81 aa5.63□□□□□ -1.51
TGFBR3-210ENST00000533089 PAX8Q06710 450 aa5.63□□□□□ -1.51
TGFBR3-210ENST00000533089 BRD3OSQ6XYD6 125 aa5.63□□□□□ -1.51
TGFBR3-210ENST00000533089 IL17RELQ6ZVW7 336 aa5.63□□□□□ -1.51
TGFBR3-210ENST00000533089 LYPD6Q86Y78 171 aa5.63□□□□□ -1.51
TGFBR3-210ENST00000533089 WBP1Q96G27 269 aa5.63□□□□□ -1.51
TGFBR3-210ENST00000533089 LINC00477Q96M19 166 aa5.63□□□□□ -1.51
TGFBR3-210ENST00000533089 RPUSD1Q9UJJ7 312 aaKnown RBP5.63□□□□□ -1.51
TGFBR3-210ENST00000533089 OOSP1A8MZH6 123 aa5.63□□□□□ -1.51
TGFBR3-210ENST00000533089 ZNF726P1Q15940 193 aa5.63□□□□□ -1.51
TGFBR3-210ENST00000533089 LHFPL1Q86WI0 220 aa5.63□□□□□ -1.51
TGFBR3-210ENST00000533089 BAALCQ8WXS3 180 aa5.63□□□□□ -1.51
TGFBR3-210ENST00000533089 TGFBR3LH3BV60 316 aa5.63□□□□□ -1.51
TGFBR3-210ENST00000533089 LEPROTO15243 131 aa5.63□□□□□ -1.51
TGFBR3-210ENST00000533089 NEGR1Q7Z3B1 354 aa5.63□□□□□ -1.51
TGFBR3-210ENST00000533089 PINLYPA6NC86 204 aa5.63□□□□□ -1.51
TGFBR3-210ENST00000533089 XGP55808 180 aa5.63□□□□□ -1.51
TGFBR3-210ENST00000533089 FOXF2Q12947 444 aa5.63□□□□□ -1.51
TGFBR3-210ENST00000533089 ZNF672Q499Z4 452 aaPredicted RBP5.63□□□□□ -1.51
TGFBR3-210ENST00000533089 TREML4Q6UXN2 200 aa5.63□□□□□ -1.51
TGFBR3-210ENST00000533089 CKAP5Q14008 2032 aa5.63□□□□□ -1.51
TGFBR3-210ENST00000533089 A0A087WX48 190 aa5.62□□□□□ -1.51
TGFBR3-210ENST00000533089 SMIM27A0A1W2PRY6 76 aa5.62□□□□□ -1.51
TGFBR3-210ENST00000533089 MUSTN1Q8IVN3 82 aa5.62□□□□□ -1.51
TGFBR3-210ENST00000533089 PAQR4Q8N4S7 273 aaPredicted RBP5.62□□□□□ -1.51
TGFBR3-210ENST00000533089 GBF1Q92538 1859 aa5.62□□□□□ -1.51
TGFBR3-210ENST00000533089 MRPL35Q9NZE8 188 aaKnown RBP5.62□□□□□ -1.51
TGFBR3-210ENST00000533089 EFNA4P52798 201 aa5.62□□□□□ -1.51
TGFBR3-210ENST00000533089 NDPQ00604 133 aa5.62□□□□□ -1.51
TGFBR3-210ENST00000533089 UBE2E2Q96LR5 201 aa5.62□□□□□ -1.51
TGFBR3-210ENST00000533089 SIRPDQ9H106 197 aa5.62□□□□□ -1.51
TGFBR3-210ENST00000533089 CABIN1Q9Y6J0 2220 aa5.62□□□□□ -1.51
TGFBR3-210ENST00000533089 TIMM17BO60830 172 aa5.62□□□□□ -1.51
TGFBR3-210ENST00000533089 ZNF493Q6ZR52 646 aa5.62□□□□□ -1.51
TGFBR3-210ENST00000533089 SLC50A1Q9BRV3 221 aa5.62□□□□□ -1.51
TGFBR3-210ENST00000533089 PAX4O43316 350 aa5.62□□□□□ -1.51
TGFBR3-210ENST00000533089 BAALC-AS2P0C853 105 aa5.62□□□□□ -1.51
TGFBR3-210ENST00000533089 ARTNQ5T4W7 220 aa5.62□□□□□ -1.51
TGFBR3-210ENST00000533089 RNF144BQ7Z419 303 aa5.62□□□□□ -1.51
TGFBR3-210ENST00000533089 KLHL30-AS1Q8NEE0 82 aa5.62□□□□□ -1.51
TGFBR3-210ENST00000533089 PYGO2Q9BRQ0 406 aa5.62□□□□□ -1.51
TGFBR3-210ENST00000533089 TP73-AS1Q9UF72 201 aa5.62□□□□□ -1.51
TGFBR3-210ENST00000533089 M0R1W7 72 aa5.62□□□□□ -1.51
TGFBR3-210ENST00000533089 ARMS2P0C7Q2 107 aa5.62□□□□□ -1.51
TGFBR3-210ENST00000533089 ERCC8Q13216 396 aa5.62□□□□□ -1.51
TGFBR3-210ENST00000533089 IGHV1-46P01743 117 aa5.61□□□□□ -1.51
TGFBR3-210ENST00000533089 LINC01620Q4KN68 170 aa5.61□□□□□ -1.51
TGFBR3-210ENST00000533089 ASPHD1Q5U4P2 390 aa5.61□□□□□ -1.51
TGFBR3-210ENST00000533089 C20orf204Q6ZNR8 217 aa5.61□□□□□ -1.51
TGFBR3-210ENST00000533089 C20orf197Q8N268 126 aa5.61□□□□□ -1.51
TGFBR3-210ENST00000533089 ZNF747Q9BV97 191 aa5.61□□□□□ -1.51
TGFBR3-210ENST00000533089 TIMM21Q9BVV7 248 aa5.61□□□□□ -1.51
TGFBR3-210ENST00000533089 GPR179Q6PRD1 2367 aa5.61□□□□□ -1.51
TGFBR3-210ENST00000533089 B4DSR2 109 aa5.61□□□□□ -1.51
TGFBR3-210ENST00000533089 J3QLI3 93 aa5.61□□□□□ -1.51
TGFBR3-210ENST00000533089 CRYGSP22914 178 aa5.61□□□□□ -1.51
TGFBR3-210ENST00000533089 PIP4P1Q86T03 277 aa5.61□□□□□ -1.51
TGFBR3-210ENST00000533089 MBD3L2Q8NHZ7 208 aaPredicted RBP5.61□□□□□ -1.51
TGFBR3-210ENST00000533089 MYOFQ9NZM1 2061 aa5.61□□□□□ -1.51
TGFBR3-210ENST00000533089 H3BUX3 64 aa5.61□□□□□ -1.51
TGFBR3-210ENST00000533089 NDUFS7O75251 213 aa5.61□□□□□ -1.51
TGFBR3-210ENST00000533089 PVRIGQ6DKI7 326 aa5.61□□□□□ -1.51
TGFBR3-210ENST00000533089 DEFB105AQ8NG35 78 aa5.61□□□□□ -1.51
TGFBR3-210ENST00000533089 NCOR1O75376 2440 aa5.61□□□□□ -1.51
TGFBR3-210ENST00000533089 F6UB75 175 aa5.61□□□□□ -1.51
TGFBR3-210ENST00000533089 RBAKDNA6NC62 111 aa5.61□□□□□ -1.51
TGFBR3-210ENST00000533089 TRGV1A0A0A0MS02 117 aa5.6□□□□□ -1.51
TGFBR3-210ENST00000533089 AHCTF1Q8WYP5 2266 aa5.6□□□□□ -1.51
TGFBR3-210ENST00000533089 SP5Q6BEB4 398 aaPredicted RBP5.6□□□□□ -1.51
TGFBR3-210ENST00000533089 GFRA4Q9GZZ7 299 aa5.6□□□□□ -1.51
TGFBR3-210ENST00000533089 JPT2Q9H910 190 aa5.6□□□□□ -1.51
TGFBR3-210ENST00000533089 TTC28Q96AY4 2481 aa5.6□□□□□ -1.51
TGFBR3-210ENST00000533089 F8WEM9 126 aa5.6□□□□□ -1.51
TGFBR3-210ENST00000533089 CMC4P56277 68 aaPredicted RBP5.6□□□□□ -1.51
TGFBR3-210ENST00000533089 RNF166Q96A37 237 aaPredicted RBP5.6□□□□□ -1.51
TGFBR3-210ENST00000533089 VWA8A3KMH1 1905 aa5.6□□□□□ -1.51
TGFBR3-210ENST00000533089 TMEM213A2RRL7 107 aa5.6□□□□□ -1.51
TGFBR3-210ENST00000533089 RNF223E7ERA6 249 aa5.6□□□□□ -1.51
TGFBR3-210ENST00000533089 BUB3O43684 328 aa5.6□□□□□ -1.51
TGFBR3-210ENST00000533089 ELANEP08246 267 aa5.6□□□□□ -1.51
TGFBR3-210ENST00000533089 SLC25A29Q8N8R3 303 aa5.6□□□□□ -1.51
TGFBR3-210ENST00000533089 PRO0628Q9UI54 55 aa5.6□□□□□ -1.51
TGFBR3-210ENST00000533089 PLXNA3P51805 1871 aa5.6□□□□□ -1.51
TGFBR3-210ENST00000533089 C15orf61A6NNL5 157 aa5.59□□□□□ -1.51
TGFBR3-210ENST00000533089 LINC01545Q5VT33 79 aa5.59□□□□□ -1.51
TGFBR3-210ENST00000533089 FAM104BQ5XKR9 115 aa5.59□□□□□ -1.51
TGFBR3-210ENST00000533089 ZNF329Q86UD4 541 aa5.59□□□□□ -1.51
TGFBR3-210ENST00000533089 MLST8Q9BVC4 326 aa5.59□□□□□ -1.51
TGFBR3-210ENST00000533089 HEATR5BQ9P2D3 2071 aa5.59□□□□□ -1.51
TGFBR3-210ENST00000533089 TRAV4A0A0B4J268 109 aa5.59□□□□□ -1.51
TGFBR3-210ENST00000533089 CLPSL2Q6UWE3 100 aa5.59□□□□□ -1.51
TGFBR3-210ENST00000533089 RNF114Q9Y508 228 aa5.59□□□□□ -1.51
TGFBR3-210ENST00000533089 A0A0G2JNJ9 132 aa5.59□□□□□ -1.51
TGFBR3-210ENST00000533089 C15orf32Q32M92 178 aa5.59□□□□□ -1.51
TGFBR3-210ENST00000533089 PRR30Q53SZ7 412 aaPredicted RBP5.59□□□□□ -1.51
TGFBR3-210ENST00000533089 LINC00643Q86TS7 51 aa5.59□□□□□ -1.51
TGFBR3-210ENST00000533089 Q8N1Y9 231 aa5.59□□□□□ -1.51
TGFBR3-210ENST00000533089 PIP4P2Q8N4L2 257 aa5.59□□□□□ -1.51
TGFBR3-210ENST00000533089 LINC01356Q8N9X3 169 aa5.59□□□□□ -1.51
TGFBR3-210ENST00000533089 TTTY13Q9BZ97 58 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms