RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 SLC25A2Q9BXI2 301 aa7.89□□□□□ -1.15
SF3B2-208ENST00000529994 WDR61Q9GZS3 305 aaKnown RBP7.89□□□□□ -1.15
SF3B2-208ENST00000529994 HSPB11Q9Y547 144 aa7.89□□□□□ -1.15
SF3B2-208ENST00000529994 TRBV19A0A075B6N1 114 aa7.88□□□□□ -1.15
SF3B2-208ENST00000529994 C17orf112F2Z3M2 114 aa7.88□□□□□ -1.15
SF3B2-208ENST00000529994 EIF3GO75821 320 aaKnown RBP eCLIP7.88□□□□□ -1.15
SF3B2-208ENST00000529994 OR10J4P0C629 311 aa7.88□□□□□ -1.15
SF3B2-208ENST00000529994 HIST1H1EP10412 219 aaKnown RBP7.88□□□□□ -1.15
SF3B2-208ENST00000529994 RPL12P30050 165 aaKnown RBP7.88□□□□□ -1.15
SF3B2-208ENST00000529994 ERCC8Q13216 396 aa7.88□□□□□ -1.15
SF3B2-208ENST00000529994 FFAR4Q5NUL3 377 aa7.88□□□□□ -1.15
SF3B2-208ENST00000529994 GFI1BQ5VTD9 330 aa7.88□□□□□ -1.15
SF3B2-208ENST00000529994 EXOC3-AS1Q8N2X6 119 aa7.88□□□□□ -1.15
SF3B2-208ENST00000529994 RNF141Q8WVD5 230 aa7.88□□□□□ -1.15
SF3B2-208ENST00000529994 Q9H8V8 135 aa7.88□□□□□ -1.15
SF3B2-208ENST00000529994 KCNIP2Q9NS61 270 aa7.88□□□□□ -1.15
SF3B2-208ENST00000529994 MYCBP2O75592 4640 aa7.87□□□□□ -1.15
SF3B2-208ENST00000529994 SRRM2Q9UQ35 2752 aaKnown RBP7.87□□□□□ -1.15
SF3B2-208ENST00000529994 TRAV12-3A0A0B4J271 114 aa7.87□□□□□ -1.15
SF3B2-208ENST00000529994 LYRM9A8MSI8 78 aa7.87□□□□□ -1.15
SF3B2-208ENST00000529994 OR7C2O60412 319 aa7.87□□□□□ -1.15
SF3B2-208ENST00000529994 IFNA5P01569 189 aa7.87□□□□□ -1.15
SF3B2-208ENST00000529994 CT45A10P0DMU9 189 aa7.87□□□□□ -1.15
SF3B2-208ENST00000529994 TSPOP30536 169 aa7.87□□□□□ -1.15
SF3B2-208ENST00000529994 LEPP41159 167 aa7.87□□□□□ -1.15
SF3B2-208ENST00000529994 TAS2R60P59551 318 aa7.87□□□□□ -1.15
SF3B2-208ENST00000529994 ICAM4Q14773 271 aa7.87□□□□□ -1.15
SF3B2-208ENST00000529994 FAM122CQ6P4D5 195 aa7.87□□□□□ -1.15
SF3B2-208ENST00000529994 TMEM256Q8N2U0 113 aa7.87□□□□□ -1.15
SF3B2-208ENST00000529994 SCGB1C1Q8TD33 95 aa7.87□□□□□ -1.15
SF3B2-208ENST00000529994 CHAC2Q8WUX2 184 aa7.87□□□□□ -1.15
SF3B2-208ENST00000529994 PAXXQ9BUH6 204 aa7.87□□□□□ -1.15
SF3B2-208ENST00000529994 AAMDCQ9H7C9 122 aa7.87□□□□□ -1.15
SF3B2-208ENST00000529994 TMEM14CQ9P0S9 112 aa7.87□□□□□ -1.15
SF3B2-208ENST00000529994 IGKV2-40A0A087WW87 121 aaPredicted RBP7.86□□□□□ -1.15
SF3B2-208ENST00000529994 NPIPB6E9PJ23 425 aa7.86□□□□□ -1.15
SF3B2-208ENST00000529994 ZNF253O75346 499 aa7.86□□□□□ -1.15
SF3B2-208ENST00000529994 NDUFB4O95168 129 aa7.86□□□□□ -1.15
SF3B2-208ENST00000529994 IGKV2D-40P01614 121 aaPredicted RBP7.86□□□□□ -1.15
SF3B2-208ENST00000529994 ATP5G1P05496 136 aa7.86□□□□□ -1.15
SF3B2-208ENST00000529994 ATP5G3P48201 142 aa7.86□□□□□ -1.15
SF3B2-208ENST00000529994 C16orf74Q96GX8 76 aa7.86□□□□□ -1.15
SF3B2-208ENST00000529994 FAM167A-AS1Q96KT0 104 aa7.86□□□□□ -1.15
SF3B2-208ENST00000529994 MRPL32Q9BYC8 188 aaKnown RBP7.86□□□□□ -1.15
SF3B2-208ENST00000529994 OR51M1Q9H341 326 aa7.86□□□□□ -1.15
SF3B2-208ENST00000529994 NOP10Q9NPE3 64 aaKnown RBP7.86□□□□□ -1.15
SF3B2-208ENST00000529994 FUT9Q9Y231 359 aa7.86□□□□□ -1.15
SF3B2-208ENST00000529994 PLAC8L1A1L4L8 177 aa7.85□□□□□ -1.15
SF3B2-208ENST00000529994 H7BYZ3 331 aa7.85□□□□□ -1.15
SF3B2-208ENST00000529994 PTTG1O95997 202 aa7.85□□□□□ -1.15
SF3B2-208ENST00000529994 UBE2L3P68036 154 aaKnown RBP7.85□□□□□ -1.15
SF3B2-208ENST00000529994 Q5VSD8 79 aa7.85□□□□□ -1.15
SF3B2-208ENST00000529994 CCDC28AQ8IWP9 274 aa7.85□□□□□ -1.15
SF3B2-208ENST00000529994 LYPD1Q8N2G4 141 aa7.85□□□□□ -1.15
SF3B2-208ENST00000529994 PHYHIPLQ96FC7 376 aa7.85□□□□□ -1.15
SF3B2-208ENST00000529994 MED28Q9H204 178 aa7.85□□□□□ -1.15
SF3B2-208ENST00000529994 WFDC1Q9HC57 220 aa7.85□□□□□ -1.15
SF3B2-208ENST00000529994 VPS13BQ7Z7G8 4022 aa7.85□□□□□ -1.15
SF3B2-208ENST00000529994 NBEAP1P0C6P0 100 aa7.84□□□□□ -1.15
SF3B2-208ENST00000529994 BTF3P20290 206 aaKnown RBP7.84□□□□□ -1.15
SF3B2-208ENST00000529994 XGP55808 180 aa7.84□□□□□ -1.15
SF3B2-208ENST00000529994 BTN1A1Q13410 526 aa7.84□□□□□ -1.15
SF3B2-208ENST00000529994 PDE6HQ13956 83 aa7.84□□□□□ -1.15
SF3B2-208ENST00000529994 TTC32Q5I0X7 151 aa7.84□□□□□ -1.15
SF3B2-208ENST00000529994 TMEM263Q8WUH6 116 aaKnown RBP7.84□□□□□ -1.15
SF3B2-208ENST00000529994 FXYD5Q96DB9 178 aa7.84□□□□□ -1.15
SF3B2-208ENST00000529994 MRPL53Q96EL3 112 aaKnown RBP7.84□□□□□ -1.15
SF3B2-208ENST00000529994 Q9H3A6 140 aa7.84□□□□□ -1.15
SF3B2-208ENST00000529994 RPH3ALQ9UNE2 315 aa7.84□□□□□ -1.15
SF3B2-208ENST00000529994 PRELID1Q9Y255 219 aa7.84□□□□□ -1.15
SF3B2-208ENST00000529994 A0A0J9YY99 117 aa7.83□□□□□ -1.16
SF3B2-208ENST00000529994 CBY3A6NI87 242 aa7.83□□□□□ -1.16
SF3B2-208ENST00000529994 SNURFLB1AK76 121 aa7.83□□□□□ -1.16
SF3B2-208ENST00000529994 RNASE4P34096 147 aaKnown RBP7.83□□□□□ -1.16
SF3B2-208ENST00000529994 RANP62826 216 aaKnown RBP7.83□□□□□ -1.16
SF3B2-208ENST00000529994 OR5I1Q13606 314 aa7.83□□□□□ -1.16
SF3B2-208ENST00000529994 TMEM78Q5T7P6 136 aa7.83□□□□□ -1.16
SF3B2-208ENST00000529994 Q8TAT8 98 aa7.83□□□□□ -1.16
SF3B2-208ENST00000529994 RNASE8Q8TDE3 154 aaKnown RBP7.83□□□□□ -1.16
SF3B2-208ENST00000529994 FRZBQ92765 325 aa7.83□□□□□ -1.16
SF3B2-208ENST00000529994 VGLL1Q99990 258 aa7.83□□□□□ -1.16
SF3B2-208ENST00000529994 C20orf144Q9BQM9 153 aa7.83□□□□□ -1.16
SF3B2-208ENST00000529994 AGPAT4-IT1Q9H0P7 198 aa7.83□□□□□ -1.16
SF3B2-208ENST00000529994 TIMM8BQ9Y5J9 83 aaPredicted RBP7.83□□□□□ -1.16
SF3B2-208ENST00000529994 TRAV26-1A0A087WT03 109 aa7.82□□□□□ -1.16
SF3B2-208ENST00000529994 GAGE12BA1L429 117 aa7.82□□□□□ -1.16
SF3B2-208ENST00000529994 C7orf71A4D174 169 aa7.82□□□□□ -1.16
SF3B2-208ENST00000529994 HMGB3O15347 200 aaKnown RBP7.82□□□□□ -1.16
SF3B2-208ENST00000529994 GAGE7O76087 117 aa7.82□□□□□ -1.16
SF3B2-208ENST00000529994 SMR3BP02814 79 aaPredicted RBP7.82□□□□□ -1.16
SF3B2-208ENST00000529994 GPX1P07203 203 aa7.82□□□□□ -1.16
SF3B2-208ENST00000529994 GAGE12FP0CL80 117 aa7.82□□□□□ -1.16
SF3B2-208ENST00000529994 GAGE12GP0CL81 117 aa7.82□□□□□ -1.16
SF3B2-208ENST00000529994 GAGE12IP0CL82 117 aa7.82□□□□□ -1.16
SF3B2-208ENST00000529994 RAB2AP61019 212 aa7.82□□□□□ -1.16
SF3B2-208ENST00000529994 CD300CQ08708 224 aa7.82□□□□□ -1.16
SF3B2-208ENST00000529994 KHDC3LQ587J8 217 aa7.82□□□□□ -1.16
SF3B2-208ENST00000529994 ZNF493Q6ZR52 646 aa7.82□□□□□ -1.16
SF3B2-208ENST00000529994 GNPNAT1Q96EK6 184 aaPredicted RBP7.82□□□□□ -1.16
SF3B2-208ENST00000529994 ZNF503Q96F45 646 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms