RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 GATAD1Q8WUU5 269 aa4.85□□□□□ -1.63
ATPAF1-209ENST00000529214 UBE2E2Q96LR5 201 aa4.85□□□□□ -1.63
ATPAF1-209ENST00000529214 OR4F4Q96R69 305 aa4.85□□□□□ -1.63
ATPAF1-209ENST00000529214 SPIN2AQ99865 258 aa4.85□□□□□ -1.63
ATPAF1-209ENST00000529214 SPIN2BQ9BPZ2 258 aa4.85□□□□□ -1.63
ATPAF1-209ENST00000529214 SLC25A21Q9BQT8 299 aaPredicted RBP4.85□□□□□ -1.63
ATPAF1-209ENST00000529214 FKBP11Q9NYL4 201 aa4.85□□□□□ -1.63
ATPAF1-209ENST00000529214 UQCR10Q9UDW1 63 aa4.85□□□□□ -1.63
ATPAF1-209ENST00000529214 VSIG4Q9Y279 399 aa4.85□□□□□ -1.63
ATPAF1-209ENST00000529214 TEX50A0A1B0GTY4 177 aa4.84□□□□□ -1.63
ATPAF1-209ENST00000529214 A0A1B0GW64 132 aa4.84□□□□□ -1.63
ATPAF1-209ENST00000529214 NAP1L6A6NFF2 107 aa4.84□□□□□ -1.63
ATPAF1-209ENST00000529214 C9orf118A6NHY6 69 aa4.84□□□□□ -1.63
ATPAF1-209ENST00000529214 CRYM-AS1A6NIL9 109 aa4.84□□□□□ -1.63
ATPAF1-209ENST00000529214 G3V3Q6 166 aa4.84□□□□□ -1.63
ATPAF1-209ENST00000529214 H3BUA1 57 aa4.84□□□□□ -1.63
ATPAF1-209ENST00000529214 K7EPK0 472 aa4.84□□□□□ -1.63
ATPAF1-209ENST00000529214 OR9G9P0C7N8 305 aa4.84□□□□□ -1.63
ATPAF1-209ENST00000529214 IGLC1P0CG04 106 aa4.84□□□□□ -1.63
ATPAF1-209ENST00000529214 APELAP0DMC3 54 aa4.84□□□□□ -1.63
ATPAF1-209ENST00000529214 MYOD1P15172 320 aa4.84□□□□□ -1.63
ATPAF1-209ENST00000529214 EVI2AP22794 236 aa4.84□□□□□ -1.63
ATPAF1-209ENST00000529214 RPL27AP46776 148 aaKnown RBP4.84□□□□□ -1.63
ATPAF1-209ENST00000529214 HNRNPA3P51991 378 aaKnown RBP4.84□□□□□ -1.63
ATPAF1-209ENST00000529214 XGP55808 180 aa4.84□□□□□ -1.63
ATPAF1-209ENST00000529214 GAGE2BQ13066 116 aa4.84□□□□□ -1.63
ATPAF1-209ENST00000529214 TIGITQ495A1 244 aa4.84□□□□□ -1.63
ATPAF1-209ENST00000529214 GAGE2EQ4V326 116 aa4.84□□□□□ -1.63
ATPAF1-209ENST00000529214 C10orf55Q5SWW7 151 aa4.84□□□□□ -1.63
ATPAF1-209ENST00000529214 GAGE2AQ6NT46 116 aa4.84□□□□□ -1.63
ATPAF1-209ENST00000529214 C18orf65Q6ZTR6 163 aa4.84□□□□□ -1.63
ATPAF1-209ENST00000529214 ZNF695Q8IW36 515 aa4.84□□□□□ -1.63
ATPAF1-209ENST00000529214 SGPP2Q8IWX5 399 aa4.84□□□□□ -1.63
ATPAF1-209ENST00000529214 ADAD2Q8NCV1 583 aaKnown RBP4.84□□□□□ -1.63
ATPAF1-209ENST00000529214 WFDC9Q8NEX5 89 aa4.84□□□□□ -1.63
ATPAF1-209ENST00000529214 OR1L8Q8NGR8 309 aa4.84□□□□□ -1.63
ATPAF1-209ENST00000529214 MBD3L1Q8WWY6 194 aa4.84□□□□□ -1.63
ATPAF1-209ENST00000529214 TMEM230Q96A57 120 aa4.84□□□□□ -1.63
ATPAF1-209ENST00000529214 MRPL53Q96EL3 112 aaKnown RBP4.84□□□□□ -1.63
ATPAF1-209ENST00000529214 COMMD5Q9GZQ3 224 aa4.84□□□□□ -1.63
ATPAF1-209ENST00000529214 TMEM222Q9H0R3 208 aa4.84□□□□□ -1.63
ATPAF1-209ENST00000529214 NAA60Q9H7X0 242 aa4.84□□□□□ -1.63
ATPAF1-209ENST00000529214 GAGE2DQ9UEU5 116 aa4.84□□□□□ -1.63
ATPAF1-209ENST00000529214 CYSLTR1Q9Y271 337 aa4.84□□□□□ -1.63
ATPAF1-209ENST00000529214 TET2Q6N021 2002 aaPredicted RBP4.84□□□□□ -1.63
ATPAF1-209ENST00000529214 C7orf77A4D0Y5 90 aa4.83□□□□□ -1.64
ATPAF1-209ENST00000529214 B4DEV8 164 aa4.83□□□□□ -1.64
ATPAF1-209ENST00000529214 IGKV1-5P01602 117 aa4.83□□□□□ -1.64
ATPAF1-209ENST00000529214 TRGV3P03979 118 aa4.83□□□□□ -1.64
ATPAF1-209ENST00000529214 P0C879 139 aa4.83□□□□□ -1.64
ATPAF1-209ENST00000529214 CT45A10P0DMU9 189 aa4.83□□□□□ -1.64
ATPAF1-209ENST00000529214 RPL35AP18077 110 aaKnown RBP4.83□□□□□ -1.64
ATPAF1-209ENST00000529214 MYCNOSP40205 109 aa4.83□□□□□ -1.64
ATPAF1-209ENST00000529214 SUPT4H1P63272 117 aaKnown RBP4.83□□□□□ -1.64
ATPAF1-209ENST00000529214 TMEM187Q14656 261 aa4.83□□□□□ -1.64
ATPAF1-209ENST00000529214 KLK9Q2XQG4 91 aa4.83□□□□□ -1.64
ATPAF1-209ENST00000529214 C1orf195Q5TG92 126 aa4.83□□□□□ -1.64
ATPAF1-209ENST00000529214 SLC25A42Q86VD7 318 aa4.83□□□□□ -1.64
ATPAF1-209ENST00000529214 KLHL30-AS1Q8NEE0 82 aa4.83□□□□□ -1.64
ATPAF1-209ENST00000529214 C4orf3Q8WVX3 66 aa4.83□□□□□ -1.64
ATPAF1-209ENST00000529214 LINC00477Q96M19 166 aa4.83□□□□□ -1.64
ATPAF1-209ENST00000529214 YPEL4Q96NS1 127 aa4.83□□□□□ -1.64
ATPAF1-209ENST00000529214 VAMP8Q9BV40 100 aa4.83□□□□□ -1.64
ATPAF1-209ENST00000529214 MS4A6AQ9H2W1 248 aa4.83□□□□□ -1.64
ATPAF1-209ENST00000529214 NDUFA4L2Q9NRX3 87 aa4.83□□□□□ -1.64
ATPAF1-209ENST00000529214 ZNF355PQ9NSJ1 428 aa4.83□□□□□ -1.64
ATPAF1-209ENST00000529214 TMEM14BQ9NUH8 114 aa4.83□□□□□ -1.64
ATPAF1-209ENST00000529214 CACFD1Q9UGQ2 172 aa4.83□□□□□ -1.64
ATPAF1-209ENST00000529214 KLK9Q9UKQ9 250 aa4.83□□□□□ -1.64
ATPAF1-209ENST00000529214 PRNDQ9UKY0 176 aa4.83□□□□□ -1.64
ATPAF1-209ENST00000529214 NSG2Q9Y328 171 aa4.83□□□□□ -1.64
ATPAF1-209ENST00000529214 MRPS16Q9Y3D3 137 aaKnown RBP4.83□□□□□ -1.64
ATPAF1-209ENST00000529214 TNCP24821 2201 aa4.83□□□□□ -1.64
ATPAF1-209ENST00000529214 C15orf61A6NNL5 157 aa4.82□□□□□ -1.64
ATPAF1-209ENST00000529214 ZNF705FA8MVS1 300 aaPredicted RBP4.82□□□□□ -1.64
ATPAF1-209ENST00000529214 H3BQ15 152 aa4.82□□□□□ -1.64
ATPAF1-209ENST00000529214 CCL24O00175 119 aa4.82□□□□□ -1.64
ATPAF1-209ENST00000529214 MPDU1O75352 247 aa4.82□□□□□ -1.64
ATPAF1-209ENST00000529214 NDUFB4O95168 129 aa4.82□□□□□ -1.64
ATPAF1-209ENST00000529214 TRGC1P0CF51 173 aa4.82□□□□□ -1.64
ATPAF1-209ENST00000529214 ZNF705DP0CH99 300 aaPredicted RBP4.82□□□□□ -1.64
ATPAF1-209ENST00000529214 ZNF705BP0CI00 300 aaPredicted RBP4.82□□□□□ -1.64
ATPAF1-209ENST00000529214 CXCL3P19876 107 aa4.82□□□□□ -1.64
ATPAF1-209ENST00000529214 BTCP35070 178 aa4.82□□□□□ -1.64
ATPAF1-209ENST00000529214 TPPP2P59282 170 aa4.82□□□□□ -1.64
ATPAF1-209ENST00000529214 HSPE1P61604 102 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-209ENST00000529214 RPS28P62857 69 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-209ENST00000529214 GNG5P63218 68 aa4.82□□□□□ -1.64
ATPAF1-209ENST00000529214 EWSR1Q01844 656 aaKnown RBP eCLIP4.82□□□□□ -1.64
ATPAF1-209ENST00000529214 IZUMO4Q1ZYL8 232 aa4.82□□□□□ -1.64
ATPAF1-209ENST00000529214 TDRG1Q3Y452 100 aa4.82□□□□□ -1.64
ATPAF1-209ENST00000529214 COA6Q5JTJ3 125 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-209ENST00000529214 TEX43Q6ZNM6 134 aa4.82□□□□□ -1.64
ATPAF1-209ENST00000529214 Q6ZRM9 215 aa4.82□□□□□ -1.64
ATPAF1-209ENST00000529214 ZNF429Q86V71 674 aa4.82□□□□□ -1.64
ATPAF1-209ENST00000529214 USMG5Q96IX5 58 aa4.82□□□□□ -1.64
ATPAF1-209ENST00000529214 ATP5SQ99766 215 aa4.82□□□□□ -1.64
ATPAF1-209ENST00000529214 GNB4Q9HAV0 340 aa4.82□□□□□ -1.64
ATPAF1-209ENST00000529214 ZNF257Q9Y2Q1 563 aa4.82□□□□□ -1.64
ATPAF1-209ENST00000529214 VWFP04275 2813 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms